RNA–Protein interactions for RNA: ENST00000557471.5

PAPOLA-225, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-225	ENST00000557471	KDR	P35968	1356 aa		32.27	■■■□□ 2.76
PAPOLA-225	ENST00000557471	PLEKHG2	Q9H7P9	1386 aa		32.27	■■■□□ 2.76
PAPOLA-225	ENST00000557471	AEBP1	Q8IUX7	1158 aa		32.26	■■■□□ 2.76
PAPOLA-225	ENST00000557471	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.26	■■■□□ 2.76	3e-9	■■■□□ 14.7
PAPOLA-225	ENST00000557471	BRWD3	Q6RI45	1802 aa		32.25	■■■□□ 2.75
PAPOLA-225	ENST00000557471	DIEXF	Q68CQ4	756 aa	Known RBP	32.25	■■■□□ 2.75
PAPOLA-225	ENST00000557471	DDX54	Q8TDD1	881 aa	Known RBP	32.25	■■■□□ 2.75
PAPOLA-225	ENST00000557471	RGPD1	P0DJD0	1748 aa		32.24	■■■□□ 2.75
PAPOLA-225	ENST00000557471	AMOT	Q4VCS5	1084 aa		32.24	■■■□□ 2.75
PAPOLA-225	ENST00000557471	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.24	■■■□□ 2.75
PAPOLA-225	ENST00000557471	FAM196A	Q6ZSG2	479 aa		32.24	■■■□□ 2.75
PAPOLA-225	ENST00000557471	LRRC37A3	O60309	1634 aa		32.24	■■■□□ 2.75
PAPOLA-225	ENST00000557471	MARCH10	Q8NA82	808 aa	Predicted RBP	32.21	■■■□□ 2.75
PAPOLA-225	ENST00000557471	PNN	Q9H307	717 aa	Known RBP	32.21	■■■□□ 2.75
PAPOLA-225	ENST00000557471	PCDH11X	Q9BZA7	1347 aa		32.21	■■■□□ 2.75
PAPOLA-225	ENST00000557471	PCDH11Y	Q9BZA8	1340 aa		32.21	■■■□□ 2.75
PAPOLA-225	ENST00000557471	FCHSD2	O94868	740 aa		32.2	■■■□□ 2.75
PAPOLA-225	ENST00000557471	WDR43	Q15061	677 aa	Known RBP eCLIP	32.2	■■■□□ 2.75
PAPOLA-225	ENST00000557471	FAM182B	Q5T319	152 aa		32.2	■■■□□ 2.75
PAPOLA-225	ENST00000557471	NEFM	P07197	916 aa		32.18	■■■□□ 2.74
PAPOLA-225	ENST00000557471	IFNL2	Q8IZJ0	200 aa		32.15	■■■□□ 2.74
PAPOLA-225	ENST00000557471	RSPH6A	Q9H0K4	717 aa		32.15	■■■□□ 2.74
PAPOLA-225	ENST00000557471	PRKAR2B	P31323	418 aa		32.14	■■■□□ 2.74
PAPOLA-225	ENST00000557471	MRS2	Q9HD23	443 aa		32.14	■■■□□ 2.74
PAPOLA-225	ENST00000557471	C1orf141	Q5JVX7	400 aa		32.12	■■■□□ 2.73
PAPOLA-225	ENST00000557471	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.12	■■■□□ 2.73
PAPOLA-225	ENST00000557471	CYP27B1	O15528	508 aa		32.1	■■■□□ 2.73
PAPOLA-225	ENST00000557471	CCDC125	Q86Z20	511 aa		32.1	■■■□□ 2.73
PAPOLA-225	ENST00000557471	BCL9	O00512	1426 aa		32.1	■■■□□ 2.73
PAPOLA-225	ENST00000557471	HSP90AB1	P08238	724 aa	Known RBP	32.09	■■■□□ 2.73
PAPOLA-225	ENST00000557471	PKD1L3	Q7Z443	1732 aa		32.09	■■■□□ 2.73
PAPOLA-225	ENST00000557471	PHKG2	P15735	406 aa		32.09	■■■□□ 2.73
PAPOLA-225	ENST00000557471	SF3B2	Q13435	895 aa	Known RBP	32.09	■■■□□ 2.73
PAPOLA-225	ENST00000557471	GAS2L2	Q8NHY3	880 aa		32.09	■■■□□ 2.73
PAPOLA-225	ENST00000557471	MAPK8IP3	Q9UPT6	1336 aa		32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	TRIM37	O94972	964 aa		32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	NKX1-1	Q15270	411 aa	Predicted RBP	32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	MTHFSD	Q2M296	383 aa	Known RBP	32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	CCDC184	Q52MB2	194 aa		32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	AKAP4	Q5JQC9	854 aa		32.05	■■■□□ 2.72
PAPOLA-225	ENST00000557471	SOCS7	O14512	581 aa		32.04	■■■□□ 2.72
PAPOLA-225	ENST00000557471	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.04	■■■□□ 2.72
PAPOLA-225	ENST00000557471	ADAMTS8	Q9UP79	889 aa		32.04	■■■□□ 2.72
PAPOLA-225	ENST00000557471	ACSBG1	Q96GR2	724 aa		32.02	■■■□□ 2.72
PAPOLA-225	ENST00000557471	PHACTR3	Q96KR7	559 aa		32.02	■■■□□ 2.72
PAPOLA-225	ENST00000557471	SHANK3	Q9BYB0	1731 aa		32.02	■■■□□ 2.72
PAPOLA-225	ENST00000557471	DCAF5	Q96JK2	942 aa		32.01	■■■□□ 2.72
PAPOLA-225	ENST00000557471	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.01	■■■□□ 2.72
PAPOLA-225	ENST00000557471	EP400	Q96L91	3159 aa		32	■■■□□ 2.71
PAPOLA-225	ENST00000557471	SYTL4	Q96C24	671 aa	Predicted RBP	32	■■■□□ 2.71
PAPOLA-225	ENST00000557471	PLEKHF1	Q96S99	279 aa		32	■■■□□ 2.71
PAPOLA-225	ENST00000557471	CCER2	I3L3R5	266 aa		31.99	■■■□□ 2.71
PAPOLA-225	ENST00000557471	PNISR	Q8TF01	805 aa	Known RBP	31.99	■■■□□ 2.71
PAPOLA-225	ENST00000557471	PRIM1	P49642	420 aa	Known RBP	31.97	■■■□□ 2.71
PAPOLA-225	ENST00000557471	RUNDC1	Q96C34	613 aa		31.97	■■■□□ 2.71
PAPOLA-225	ENST00000557471	GNAT3	A8MTJ3	354 aa		31.96	■■■□□ 2.71
PAPOLA-225	ENST00000557471	KCNQ2	O43526	872 aa		31.94	■■■□□ 2.7
PAPOLA-225	ENST00000557471	APBA3	O96018	575 aa		31.94	■■■□□ 2.7
PAPOLA-225	ENST00000557471	BAG6	P46379	1132 aa		31.94	■■■□□ 2.7
PAPOLA-225	ENST00000557471	MPRIP	Q6WCQ1	1025 aa		31.94	■■■□□ 2.7
PAPOLA-225	ENST00000557471	KAT6B	Q8WYB5	2073 aa		31.94	■■■□□ 2.7
PAPOLA-225	ENST00000557471	ERVV-2	B6SEH9	535 aa		31.93	■■■□□ 2.7
PAPOLA-225	ENST00000557471	RTF1	Q92541	710 aa	Known RBP	31.93	■■■□□ 2.7
PAPOLA-225	ENST00000557471	MAP3K5	Q99683	1374 aa		31.93	■■■□□ 2.7
PAPOLA-225	ENST00000557471	CCDC146	Q8IYE0	955 aa		31.92	■■■□□ 2.7
PAPOLA-225	ENST00000557471	MIER1	Q8N108	512 aa		31.92	■■■□□ 2.7
PAPOLA-225	ENST00000557471	NFE2L2	Q16236	605 aa		31.91	■■■□□ 2.7
PAPOLA-225	ENST00000557471	TMOD3	Q9NYL9	352 aa		31.91	■■■□□ 2.7
PAPOLA-225	ENST00000557471	SBF2	Q86WG5	1849 aa		31.9	■■■□□ 2.7
PAPOLA-225	ENST00000557471	HTATSF1	O43719	755 aa	Known RBP	31.89	■■■□□ 2.7
PAPOLA-225	ENST00000557471	CABP4	P57796	275 aa		31.89	■■■□□ 2.7
PAPOLA-225	ENST00000557471	FAM9B	Q8IZU0	186 aa		31.89	■■■□□ 2.7
PAPOLA-225	ENST00000557471	RNMT	O43148	476 aa	Known RBP	31.88	■■■□□ 2.69
PAPOLA-225	ENST00000557471	NHS	Q6T4R5	1651 aa		31.87	■■■□□ 2.69
PAPOLA-225	ENST00000557471	DOT1L	Q8TEK3	1739 aa		31.86	■■■□□ 2.69
PAPOLA-225	ENST00000557471	KDM6A	O15550	1401 aa	Predicted RBP	31.85	■■■□□ 2.69
PAPOLA-225	ENST00000557471	PTF1A	Q7RTS3	328 aa		31.85	■■■□□ 2.69
PAPOLA-225	ENST00000557471	LGR6	Q9HBX8	967 aa		31.85	■■■□□ 2.69
PAPOLA-225	ENST00000557471	PLSCR1	O15162	318 aa		31.84	■■■□□ 2.69
PAPOLA-225	ENST00000557471	TMPO	P42166	694 aa	Known RBP	31.84	■■■□□ 2.69
PAPOLA-225	ENST00000557471	RIPK4	P57078	832 aa		31.84	■■■□□ 2.69
PAPOLA-225	ENST00000557471	LMOD3	Q0VAK6	560 aa		31.84	■■■□□ 2.69
PAPOLA-225	ENST00000557471	TEF	Q10587	303 aa		31.83	■■■□□ 2.69
PAPOLA-225	ENST00000557471	PIGB	Q92521	554 aa		31.83	■■■□□ 2.69
PAPOLA-225	ENST00000557471	NFATC2IP	Q8NCF5	419 aa		31.82	■■■□□ 2.68
PAPOLA-225	ENST00000557471	IL17RE	Q8NFR9	667 aa		31.82	■■■□□ 2.68
PAPOLA-225	ENST00000557471	SLC52A2	Q9HAB3	445 aa		31.82	■■■□□ 2.68
PAPOLA-225	ENST00000557471	EN1	Q05925	392 aa	Predicted RBP	31.81	■■■□□ 2.68
PAPOLA-225	ENST00000557471	NEUROD2	Q15784	382 aa		31.81	■■■□□ 2.68
PAPOLA-225	ENST00000557471	DEFB132	Q7Z7B7	95 aa		31.81	■■■□□ 2.68
PAPOLA-225	ENST00000557471	SMARCC1	Q92922	1105 aa	Predicted RBP	31.81	■■■□□ 2.68
PAPOLA-225	ENST00000557471	TNS1	Q9HBL0	1735 aa	Known RBP	31.8	■■■□□ 2.68
PAPOLA-225	ENST00000557471	APAF1	O14727	1248 aa		31.79	■■■□□ 2.68
PAPOLA-225	ENST00000557471	TOGARAM1	Q9Y4F4	1720 aa		31.78	■■■□□ 2.68
PAPOLA-225	ENST00000557471	MCM10	Q7L590	875 aa		31.77	■■■□□ 2.68
PAPOLA-225	ENST00000557471	RRP7A	Q9Y3A4	280 aa	Known RBP	31.77	■■■□□ 2.68
PAPOLA-225	ENST00000557471	SCN11A	Q9UI33	1791 aa		31.77	■■■□□ 2.68
PAPOLA-225	ENST00000557471	CAMKK2	Q96RR4	588 aa		31.75	■■■□□ 2.67
PAPOLA-225	ENST00000557471	CEMIP	Q8WUJ3	1361 aa		31.75	■■■□□ 2.67
PAPOLA-225	ENST00000557471	BTAF1	O14981	1849 aa		31.75	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms