RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 KDRP35968 1356 aa28.13■■■□□ 2.09
SEC23A-213ENST00000557280 PKD1L3Q7Z443 1732 aa28.13■■■□□ 2.09
SEC23A-213ENST00000557280 U2SURPO15042 1029 aaKnown RBP28.12■■■□□ 2.09
SEC23A-213ENST00000557280 HMOX1P09601 288 aa28.12■■■□□ 2.09
SEC23A-213ENST00000557280 ZCRB1Q8TBF4 217 aaKnown RBP28.09■■■□□ 2.09
SEC23A-213ENST00000557280 DDX54Q8TDD1 881 aaKnown RBP28.08■■■□□ 2.09
SEC23A-213ENST00000557280 SOCS7O14512 581 aa28.07■■■□□ 2.08
SEC23A-213ENST00000557280 UPF1Q92900 1129 aaKnown RBP eCLIP28.06■■■□□ 2.08
SEC23A-213ENST00000557280 ANP32CO43423 234 aa28.05■■■□□ 2.08
SEC23A-213ENST00000557280 FAM196AQ6ZSG2 479 aa28.04■■■□□ 2.08
SEC23A-213ENST00000557280 CYP27B1O15528 508 aa28.03■■■□□ 2.08
SEC23A-213ENST00000557280 NUDCQ9Y266 331 aa28.03■■■□□ 2.08
SEC23A-213ENST00000557280 BCL9O00512 1426 aa28.02■■■□□ 2.08
SEC23A-213ENST00000557280 PCDH11XQ9BZA7 1347 aa28.02■■■□□ 2.08
SEC23A-213ENST00000557280 PCDH11YQ9BZA8 1340 aa28.02■■■□□ 2.08
SEC23A-213ENST00000557280 U2AF1L5P0DN76 240 aaPredicted RBP28.02■■■□□ 2.08
SEC23A-213ENST00000557280 U2AF1Q01081 240 aaKnown RBP eCLIP28.02■■■□□ 2.08
SEC23A-213ENST00000557280 CCDC184Q52MB2 194 aa28.02■■■□□ 2.08
SEC23A-213ENST00000557280 PLEKHG2Q9H7P9 1386 aa28.01■■■□□ 2.07
SEC23A-213ENST00000557280 RSPH6AQ9H0K4 717 aa28.01■■■□□ 2.07
SEC23A-213ENST00000557280 SBF2Q86WG5 1849 aa28.01■■■□□ 2.07
SEC23A-213ENST00000557280 SPG7Q9UQ90 795 aa28■■■□□ 2.07
SEC23A-213ENST00000557280 TNS1Q9HBL0 1735 aaKnown RBP28■■■□□ 2.07
SEC23A-213ENST00000557280 TRIM37O94972 964 aa27.99■■■□□ 2.07
SEC23A-213ENST00000557280 PTF1AQ7RTS3 328 aa27.99■■■□□ 2.07
SEC23A-213ENST00000557280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.99■■■□□ 2.074e-14■□□□□ 10.9
SEC23A-213ENST00000557280 DOT1LQ8TEK3 1739 aa27.98■■■□□ 2.07
SEC23A-213ENST00000557280 PRKAR2BP31323 418 aa27.97■■■□□ 2.07
SEC23A-213ENST00000557280 ACSBG1Q96GR2 724 aa27.97■■■□□ 2.07
SEC23A-213ENST00000557280 TOGARAM1Q9Y4F4 1720 aa27.97■■■□□ 2.07
SEC23A-213ENST00000557280 PLEKHO1Q53GL0 409 aaPredicted RBP27.96■■■□□ 2.07
SEC23A-213ENST00000557280 NHSQ6T4R5 1651 aa27.95■■■□□ 2.07
SEC23A-213ENST00000557280 PHKG2P15735 406 aa27.95■■■□□ 2.06
SEC23A-213ENST00000557280 KCNQ2O43526 872 aa27.94■■■□□ 2.06
SEC23A-213ENST00000557280 ZNF530Q6P9A1 599 aaPredicted RBP27.94■■■□□ 2.06
SEC23A-213ENST00000557280 AMOTQ4VCS5 1084 aa27.93■■■□□ 2.06
SEC23A-213ENST00000557280 PHACTR3Q96KR7 559 aa27.93■■■□□ 2.06
SEC23A-213ENST00000557280 MTHFSDQ2M296 383 aaKnown RBP27.92■■■□□ 2.06
SEC23A-213ENST00000557280 FCHSD2O94868 740 aa27.91■■■□□ 2.06
SEC23A-213ENST00000557280 IFNL2Q8IZJ0 200 aa27.91■■■□□ 2.06
SEC23A-213ENST00000557280 NKX1-1Q15270 411 aaPredicted RBP27.9■■■□□ 2.06
SEC23A-213ENST00000557280 KDM6AO15550 1401 aaPredicted RBP27.9■■■□□ 2.06
SEC23A-213ENST00000557280 DEFB132Q7Z7B7 95 aa27.88■■■□□ 2.05
SEC23A-213ENST00000557280 BCL11BQ9C0K0 894 aaPredicted RBP27.88■■■□□ 2.05
SEC23A-213ENST00000557280 PLEKHF1Q96S99 279 aa27.87■■■□□ 2.05
SEC23A-213ENST00000557280 PRIM1P49642 420 aaKnown RBP27.86■■■□□ 2.05
SEC23A-213ENST00000557280 DIEXFQ68CQ4 756 aaKnown RBP27.86■■■□□ 2.05
SEC23A-213ENST00000557280 CCDC125Q86Z20 511 aa27.86■■■□□ 2.05
SEC23A-213ENST00000557280 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
SEC23A-213ENST00000557280 BTAF1O14981 1849 aa27.85■■■□□ 2.05
SEC23A-213ENST00000557280 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
SEC23A-213ENST00000557280 C1orf141Q5JVX7 400 aa27.85■■■□□ 2.05
SEC23A-213ENST00000557280 SYTL4Q96C24 671 aaPredicted RBP27.85■■■□□ 2.05
SEC23A-213ENST00000557280 ADAMTS8Q9UP79 889 aa27.85■■■□□ 2.05
SEC23A-213ENST00000557280 APBA3O96018 575 aa27.84■■■□□ 2.05
SEC23A-213ENST00000557280 SF3B2Q13435 895 aaKnown RBP27.84■■■□□ 2.05
SEC23A-213ENST00000557280 AKAP4Q5JQC9 854 aa27.83■■■□□ 2.05
SEC23A-213ENST00000557280 MPRIPQ6WCQ1 1025 aa27.83■■■□□ 2.05
SEC23A-213ENST00000557280 ITGB4P16144 1822 aa27.83■■■□□ 2.05
SEC23A-213ENST00000557280 GAS2L2Q8NHY3 880 aa27.82■■■□□ 2.04
SEC23A-213ENST00000557280 EN1Q05925 392 aaPredicted RBP27.81■■■□□ 2.04
SEC23A-213ENST00000557280 CCDC146Q8IYE0 955 aa27.81■■■□□ 2.04
SEC23A-213ENST00000557280 ADAMTS7Q9UKP4 1686 aa27.81■■■□□ 2.04
SEC23A-213ENST00000557280 DCAF5Q96JK2 942 aa27.8■■■□□ 2.04
SEC23A-213ENST00000557280 MAP3K5Q99683 1374 aa27.8■■■□□ 2.04
SEC23A-213ENST00000557280 SCN11AQ9UI33 1791 aa27.8■■■□□ 2.04
SEC23A-213ENST00000557280 KAT6BQ8WYB5 2073 aa27.8■■■□□ 2.04
SEC23A-213ENST00000557280 HSP90AB1P08238 724 aaKnown RBP27.79■■■□□ 2.04
SEC23A-213ENST00000557280 BAG6P46379 1132 aa27.79■■■□□ 2.04
SEC23A-213ENST00000557280 PNISRQ8TF01 805 aaKnown RBP27.78■■■□□ 2.04
SEC23A-213ENST00000557280 LGR6Q9HBX8 967 aa27.78■■■□□ 2.04
SEC23A-213ENST00000557280 VIRMAQ69YN4 1812 aaKnown RBP27.77■■■□□ 2.04
SEC23A-213ENST00000557280 EZH2Q15910 746 aaKnown RBP27.76■■■□□ 2.03
SEC23A-213ENST00000557280 PIGBQ92521 554 aa27.76■■■□□ 2.03
SEC23A-213ENST00000557280 CAMKK2Q96RR4 588 aa27.76■■■□□ 2.03
SEC23A-213ENST00000557280 MRC1P22897 1456 aa27.76■■■□□ 2.03
SEC23A-213ENST00000557280 RGPD3A6NKT7 1758 aaPredicted RBP27.76■■■□□ 2.03
SEC23A-213ENST00000557280 RGPD4Q7Z3J3 1758 aa27.76■■■□□ 2.03
SEC23A-213ENST00000557280 MAPK8IP3Q9UPT6 1336 aa27.75■■■□□ 2.03
SEC23A-213ENST00000557280 GNAT3A8MTJ3 354 aa27.75■■■□□ 2.03
SEC23A-213ENST00000557280 RNMTO43148 476 aaKnown RBP27.75■■■□□ 2.03
SEC23A-213ENST00000557280 DLG5Q8TDM6 1919 aa27.73■■■□□ 2.03
SEC23A-213ENST00000557280 RREB1Q92766 1687 aa27.73■■■□□ 2.03
SEC23A-213ENST00000557280 ERVV-2B6SEH9 535 aa27.73■■■□□ 2.03
SEC23A-213ENST00000557280 TMOD3Q9NYL9 352 aa27.73■■■□□ 2.03
SEC23A-213ENST00000557280 NFE2L2Q16236 605 aa27.72■■■□□ 2.03
SEC23A-213ENST00000557280 MIER1Q8N108 512 aa27.72■■■□□ 2.03
SEC23A-213ENST00000557280 IL17REQ8NFR9 667 aa27.72■■■□□ 2.03
SEC23A-213ENST00000557280 RUNDC1Q96C34 613 aa27.72■■■□□ 2.03
SEC23A-213ENST00000557280 PNNQ9H307 717 aaKnown RBP27.72■■■□□ 2.03
SEC23A-213ENST00000557280 PLSCR1O15162 318 aa27.71■■■□□ 2.03
SEC23A-213ENST00000557280 NEFMP07197 916 aa27.71■■■□□ 2.03
SEC23A-213ENST00000557280 CABP4P57796 275 aa27.7■■■□□ 2.02
SEC23A-213ENST00000557280 PROM2Q8N271 834 aa27.7■■■□□ 2.02
SEC23A-213ENST00000557280 RRP7AQ9Y3A4 280 aaKnown RBP27.7■■■□□ 2.02
SEC23A-213ENST00000557280 DCTN1Q14203 1278 aa27.69■■■□□ 2.02
SEC23A-213ENST00000557280 MCM10Q7L590 875 aa27.69■■■□□ 2.02
SEC23A-213ENST00000557280 NFATC2IPQ8NCF5 419 aa27.69■■■□□ 2.02
SEC23A-213ENST00000557280 CEMIPQ8WUJ3 1361 aa27.69■■■□□ 2.02
SEC23A-213ENST00000557280 NUP188Q5SRE5 1749 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms