RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
APEX1-217ENST00000557181 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
APEX1-217ENST00000557181 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
APEX1-217ENST00000557181 HMOX1P09601 288 aa17■□□□□ 0.31
APEX1-217ENST00000557181 RGPD1P0DJD0 1748 aa17■□□□□ 0.31
APEX1-217ENST00000557181 FAM182BQ5T319 152 aa17■□□□□ 0.31
APEX1-217ENST00000557181 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
APEX1-217ENST00000557181 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
APEX1-217ENST00000557181 NEFMP07197 916 aa16.99■□□□□ 0.31
APEX1-217ENST00000557181 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
APEX1-217ENST00000557181 AEBP1Q8IUX7 1158 aa16.99■□□□□ 0.31
APEX1-217ENST00000557181 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
APEX1-217ENST00000557181 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
APEX1-217ENST00000557181 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
APEX1-217ENST00000557181 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
APEX1-217ENST00000557181 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
APEX1-217ENST00000557181 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
APEX1-217ENST00000557181 SOCS7O14512 581 aa16.96■□□□□ 0.31
APEX1-217ENST00000557181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.318e-8■□□□□ 10.1
APEX1-217ENST00000557181 KDRP35968 1356 aa16.96■□□□□ 0.31
APEX1-217ENST00000557181 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
APEX1-217ENST00000557181 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
APEX1-217ENST00000557181 PNNQ9H307 717 aaKnown RBP16.94■□□□□ 0.3
APEX1-217ENST00000557181 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
APEX1-217ENST00000557181 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
APEX1-217ENST00000557181 CCDC125Q86Z20 511 aa16.93■□□□□ 0.3
APEX1-217ENST00000557181 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
APEX1-217ENST00000557181 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
APEX1-217ENST00000557181 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
APEX1-217ENST00000557181 FCHSD2O94868 740 aa16.92■□□□□ 0.3
APEX1-217ENST00000557181 TRIM37O94972 964 aa16.92■□□□□ 0.3
APEX1-217ENST00000557181 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
APEX1-217ENST00000557181 MAPK8IP3Q9UPT6 1336 aa16.92■□□□□ 0.3
APEX1-217ENST00000557181 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
APEX1-217ENST00000557181 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
APEX1-217ENST00000557181 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
APEX1-217ENST00000557181 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
APEX1-217ENST00000557181 ACSBG1Q96GR2 724 aa16.9■□□□□ 0.3
APEX1-217ENST00000557181 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
APEX1-217ENST00000557181 BCL9O00512 1426 aa16.89■□□□□ 0.29
APEX1-217ENST00000557181 CYP27B1O15528 508 aa16.89■□□□□ 0.29
APEX1-217ENST00000557181 PHKG2P15735 406 aa16.89■□□□□ 0.29
APEX1-217ENST00000557181 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
APEX1-217ENST00000557181 BAG6P46379 1132 aa16.88■□□□□ 0.29
APEX1-217ENST00000557181 SBF2Q86WG5 1849 aa16.88■□□□□ 0.29
APEX1-217ENST00000557181 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
APEX1-217ENST00000557181 APBA3O96018 575 aa16.87■□□□□ 0.29
APEX1-217ENST00000557181 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
APEX1-217ENST00000557181 BCL11BQ9C0K0 894 aaPredicted RBP16.87■□□□□ 0.29
APEX1-217ENST00000557181 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
APEX1-217ENST00000557181 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
APEX1-217ENST00000557181 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
APEX1-217ENST00000557181 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
APEX1-217ENST00000557181 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
APEX1-217ENST00000557181 TMOD3Q9NYL9 352 aa16.84■□□□□ 0.29
APEX1-217ENST00000557181 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
APEX1-217ENST00000557181 KCNQ2O43526 872 aa16.83■□□□□ 0.28
APEX1-217ENST00000557181 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
APEX1-217ENST00000557181 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
APEX1-217ENST00000557181 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
APEX1-217ENST00000557181 MAP3K5Q99683 1374 aa16.83■□□□□ 0.28
APEX1-217ENST00000557181 CABP4P57796 275 aa16.82■□□□□ 0.28
APEX1-217ENST00000557181 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
APEX1-217ENST00000557181 ADAMTS8Q9UP79 889 aa16.82■□□□□ 0.28
APEX1-217ENST00000557181 BTAF1O14981 1849 aa16.82■□□□□ 0.28
APEX1-217ENST00000557181 EP400Q96L91 3159 aa16.81■□□□□ 0.28
APEX1-217ENST00000557181 CCDC184Q52MB2 194 aa16.81■□□□□ 0.28
APEX1-217ENST00000557181 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
APEX1-217ENST00000557181 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
APEX1-217ENST00000557181 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
APEX1-217ENST00000557181 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
APEX1-217ENST00000557181 ITGB4P16144 1822 aa16.8■□□□□ 0.28
APEX1-217ENST00000557181 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
APEX1-217ENST00000557181 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
APEX1-217ENST00000557181 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
APEX1-217ENST00000557181 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
APEX1-217ENST00000557181 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
APEX1-217ENST00000557181 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
APEX1-217ENST00000557181 TEFQ10587 303 aa16.78■□□□□ 0.28
APEX1-217ENST00000557181 PTF1AQ7RTS3 328 aa16.78■□□□□ 0.28
APEX1-217ENST00000557181 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
APEX1-217ENST00000557181 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.28
APEX1-217ENST00000557181 CCER2I3L3R5 266 aa16.77■□□□□ 0.28
APEX1-217ENST00000557181 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
APEX1-217ENST00000557181 PNISRQ8TF01 805 aaKnown RBP16.77■□□□□ 0.28
APEX1-217ENST00000557181 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.28
APEX1-217ENST00000557181 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
APEX1-217ENST00000557181 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.27
APEX1-217ENST00000557181 PLSCR1O15162 318 aa16.76■□□□□ 0.27
APEX1-217ENST00000557181 HTATSF1O43719 755 aaKnown RBP16.76■□□□□ 0.27
APEX1-217ENST00000557181 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
APEX1-217ENST00000557181 PIGBQ92521 554 aa16.76■□□□□ 0.27
APEX1-217ENST00000557181 RIPK4P57078 832 aa16.75■□□□□ 0.27
APEX1-217ENST00000557181 EZH2Q15910 746 aaKnown RBP16.75■□□□□ 0.27
APEX1-217ENST00000557181 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
APEX1-217ENST00000557181 LGR6Q9HBX8 967 aa16.75■□□□□ 0.27
APEX1-217ENST00000557181 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
APEX1-217ENST00000557181 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
APEX1-217ENST00000557181 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
APEX1-217ENST00000557181 PALLDQ8WX93 1383 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms