RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
MARK3-211ENST00000556744 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
MARK3-211ENST00000556744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
MARK3-211ENST00000556744 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
MARK3-211ENST00000556744 HSPA5P11021 654 aaKnown RBP13.23□□□□□ -0.29
MARK3-211ENST00000556744 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
MARK3-211ENST00000556744 MYOM1P52179 1685 aa13.23□□□□□ -0.29
MARK3-211ENST00000556744 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
MARK3-211ENST00000556744 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
MARK3-211ENST00000556744 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
MARK3-211ENST00000556744 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
MARK3-211ENST00000556744 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
MARK3-211ENST00000556744 FYB1O15117 783 aa13.21□□□□□ -0.29
MARK3-211ENST00000556744 EVA1CP58658 441 aa13.21□□□□□ -0.29
MARK3-211ENST00000556744 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
MARK3-211ENST00000556744 CRB1P82279 1406 aa13.21□□□□□ -0.3
MARK3-211ENST00000556744 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
MARK3-211ENST00000556744 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
MARK3-211ENST00000556744 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
MARK3-211ENST00000556744 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
MARK3-211ENST00000556744 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
MARK3-211ENST00000556744 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
MARK3-211ENST00000556744 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
MARK3-211ENST00000556744 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
MARK3-211ENST00000556744 LTN1O94822 1766 aa13.17□□□□□ -0.3
MARK3-211ENST00000556744 COG3Q96JB2 828 aa13.17□□□□□ -0.3
MARK3-211ENST00000556744 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
MARK3-211ENST00000556744 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
MARK3-211ENST00000556744 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
MARK3-211ENST00000556744 IP6K1Q92551 441 aa13.16□□□□□ -0.3
MARK3-211ENST00000556744 ERBB3P21860 1342 aa13.15□□□□□ -0.3
MARK3-211ENST00000556744 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
MARK3-211ENST00000556744 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
MARK3-211ENST00000556744 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
MARK3-211ENST00000556744 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
MARK3-211ENST00000556744 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
MARK3-211ENST00000556744 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
MARK3-211ENST00000556744 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
MARK3-211ENST00000556744 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 KIF20BQ96Q89 1820 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 TOM1L2Q6ZVM7 507 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 USP35Q9P2H5 1018 aa13.13□□□□□ -0.31
MARK3-211ENST00000556744 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
MARK3-211ENST00000556744 PPP1R37O75864 691 aa13.12□□□□□ -0.31
MARK3-211ENST00000556744 RTL1A6NKG5 1358 aa13.11□□□□□ -0.31
MARK3-211ENST00000556744 FBLN1P23142 703 aa13.11□□□□□ -0.31
MARK3-211ENST00000556744 FAM196AQ6ZSG2 479 aa13.11□□□□□ -0.31
MARK3-211ENST00000556744 BCL9O00512 1426 aa13.11□□□□□ -0.31
MARK3-211ENST00000556744 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
MARK3-211ENST00000556744 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 A0A0G2JS52 829 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 HOXC9P31274 260 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 MYT1Q01538 1121 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 PANK3Q9H999 370 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
MARK3-211ENST00000556744 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
MARK3-211ENST00000556744 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
MARK3-211ENST00000556744 TIE1P35590 1138 aa13.09□□□□□ -0.31
MARK3-211ENST00000556744 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
MARK3-211ENST00000556744 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
MARK3-211ENST00000556744 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
MARK3-211ENST00000556744 DDB1Q16531 1140 aa13.08□□□□□ -0.32
MARK3-211ENST00000556744 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
MARK3-211ENST00000556744 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
MARK3-211ENST00000556744 INSRP06213 1382 aa13.07□□□□□ -0.32
MARK3-211ENST00000556744 AMPHP49418 695 aa13.07□□□□□ -0.32
MARK3-211ENST00000556744 CLCN6P51797 869 aa13.07□□□□□ -0.32
MARK3-211ENST00000556744 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
MARK3-211ENST00000556744 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
MARK3-211ENST00000556744 NSD2O96028 1365 aa13.07□□□□□ -0.32
MARK3-211ENST00000556744 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
MARK3-211ENST00000556744 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
MARK3-211ENST00000556744 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
MARK3-211ENST00000556744 FLT4P35916 1363 aa13.06□□□□□ -0.32
MARK3-211ENST00000556744 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
MARK3-211ENST00000556744 MAP2P11137 1827 aaKnown RBP13.05□□□□□ -0.32
MARK3-211ENST00000556744 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
MARK3-211ENST00000556744 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
MARK3-211ENST00000556744 IL2RBP14784 551 aa13.05□□□□□ -0.32
MARK3-211ENST00000556744 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
MARK3-211ENST00000556744 DEFB132Q7Z7B7 95 aa13.05□□□□□ -0.32
MARK3-211ENST00000556744 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
MARK3-211ENST00000556744 EXOC5O00471 708 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
MARK3-211ENST00000556744 RGPD2P0DJD1 1756 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 TRIM37O94972 964 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 BAG6P46379 1132 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
MARK3-211ENST00000556744 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms