RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 MARCH10Q8NA82 808 aaPredicted RBP26.51■■□□□ 1.83
PNN-205ENST00000556530 RGPD1P0DJD0 1748 aa26.51■■□□□ 1.83
PNN-205ENST00000556530 TNS2Q63HR2 1409 aa26.5■■□□□ 1.83
PNN-205ENST00000556530 OVOS2A0A0G2JMS6 1433 aa26.49■■□□□ 1.83
PNN-205ENST00000556530 U2AF1L5P0DN76 240 aaPredicted RBP26.48■■□□□ 1.83
PNN-205ENST00000556530 U2AF1Q01081 240 aaKnown RBP eCLIP26.48■■□□□ 1.83
PNN-205ENST00000556530 FAM196AQ6ZSG2 479 aa26.47■■□□□ 1.83
PNN-205ENST00000556530 SPG7Q9UQ90 795 aa26.46■■□□□ 1.83
PNN-205ENST00000556530 SOCS7O14512 581 aa26.43■■□□□ 1.82
PNN-205ENST00000556530 PLEKHO1Q53GL0 409 aaPredicted RBP26.43■■□□□ 1.82
PNN-205ENST00000556530 KDRP35968 1356 aa26.43■■□□□ 1.82
PNN-205ENST00000556530 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.82
PNN-205ENST00000556530 KAT6BQ8WYB5 2073 aa26.42■■□□□ 1.82
PNN-205ENST00000556530 PCDH11XQ9BZA7 1347 aa26.41■■□□□ 1.82
PNN-205ENST00000556530 PCDH11YQ9BZA8 1340 aa26.41■■□□□ 1.82
PNN-205ENST00000556530 SHANK3Q9BYB0 1731 aa26.41■■□□□ 1.82
PNN-205ENST00000556530 TRIM37O94972 964 aa26.4■■□□□ 1.82
PNN-205ENST00000556530 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.82
PNN-205ENST00000556530 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.82
PNN-205ENST00000556530 ACSBG1Q96GR2 724 aa26.39■■□□□ 1.82
PNN-205ENST00000556530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.822e-23■■■□□ 18.7
PNN-205ENST00000556530 CYP27B1O15528 508 aa26.38■■□□□ 1.81
PNN-205ENST00000556530 PRKAR2BP31323 418 aa26.38■■□□□ 1.81
PNN-205ENST00000556530 ZNF530Q6P9A1 599 aaPredicted RBP26.38■■□□□ 1.81
PNN-205ENST00000556530 SF3B2Q13435 895 aaKnown RBP26.37■■□□□ 1.81
PNN-205ENST00000556530 CCDC184Q52MB2 194 aa26.37■■□□□ 1.81
PNN-205ENST00000556530 RSPH6AQ9H0K4 717 aa26.37■■□□□ 1.81
PNN-205ENST00000556530 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
PNN-205ENST00000556530 DIEXFQ68CQ4 756 aaKnown RBP26.36■■□□□ 1.81
PNN-205ENST00000556530 IFNL2Q8IZJ0 200 aa26.36■■□□□ 1.81
PNN-205ENST00000556530 FCHSD2O94868 740 aa26.35■■□□□ 1.81
PNN-205ENST00000556530 PHKG2P15735 406 aa26.34■■□□□ 1.81
PNN-205ENST00000556530 C1orf141Q5JVX7 400 aa26.34■■□□□ 1.81
PNN-205ENST00000556530 SBF2Q86WG5 1849 aa26.33■■□□□ 1.81
PNN-205ENST00000556530 SYTL4Q96C24 671 aaPredicted RBP26.33■■□□□ 1.81
PNN-205ENST00000556530 KCNQ2O43526 872 aa26.32■■□□□ 1.8
PNN-205ENST00000556530 MTHFSDQ2M296 383 aaKnown RBP26.32■■□□□ 1.8
PNN-205ENST00000556530 PTF1AQ7RTS3 328 aa26.32■■□□□ 1.8
PNN-205ENST00000556530 CCDC125Q86Z20 511 aa26.32■■□□□ 1.8
PNN-205ENST00000556530 PHACTR3Q96KR7 559 aa26.32■■□□□ 1.8
PNN-205ENST00000556530 MRS2Q9HD23 443 aa26.32■■□□□ 1.8
PNN-205ENST00000556530 PLEKHG2Q9H7P9 1386 aa26.31■■□□□ 1.8
PNN-205ENST00000556530 NEFMP07197 916 aa26.3■■□□□ 1.8
PNN-205ENST00000556530 BCL9O00512 1426 aa26.3■■□□□ 1.8
PNN-205ENST00000556530 APBA3O96018 575 aa26.29■■□□□ 1.8
PNN-205ENST00000556530 PRIM1P49642 420 aaKnown RBP26.29■■□□□ 1.8
PNN-205ENST00000556530 BCL11BQ9C0K0 894 aaPredicted RBP26.29■■□□□ 1.8
PNN-205ENST00000556530 PNNQ9H307 717 aaKnown RBP26.28■■□□□ 1.8
PNN-205ENST00000556530 DOT1LQ8TEK3 1739 aa26.28■■□□□ 1.8
PNN-205ENST00000556530 NKX1-1Q15270 411 aaPredicted RBP26.27■■□□□ 1.8
PNN-205ENST00000556530 GAS2L2Q8NHY3 880 aa26.27■■□□□ 1.8
PNN-205ENST00000556530 ADAMTS8Q9UP79 889 aa26.27■■□□□ 1.8
PNN-205ENST00000556530 HSP90AB1P08238 724 aaKnown RBP26.26■■□□□ 1.79
PNN-205ENST00000556530 AKAP4Q5JQC9 854 aa26.26■■□□□ 1.79
PNN-205ENST00000556530 MPRIPQ6WCQ1 1025 aa26.26■■□□□ 1.79
PNN-205ENST00000556530 DEFB132Q7Z7B7 95 aa26.26■■□□□ 1.79
PNN-205ENST00000556530 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
PNN-205ENST00000556530 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
PNN-205ENST00000556530 BAG6P46379 1132 aa26.24■■□□□ 1.79
PNN-205ENST00000556530 PLEKHF1Q96S99 279 aa26.24■■□□□ 1.79
PNN-205ENST00000556530 TNS1Q9HBL0 1735 aaKnown RBP26.24■■□□□ 1.79
PNN-205ENST00000556530 NHSQ6T4R5 1651 aa26.24■■□□□ 1.79
PNN-205ENST00000556530 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
PNN-205ENST00000556530 DCAF5Q96JK2 942 aa26.23■■□□□ 1.79
PNN-205ENST00000556530 TOGARAM1Q9Y4F4 1720 aa26.21■■□□□ 1.79
PNN-205ENST00000556530 EP400Q96L91 3159 aa26.2■■□□□ 1.79
PNN-205ENST00000556530 GNAT3A8MTJ3 354 aa26.2■■□□□ 1.78
PNN-205ENST00000556530 LGR6Q9HBX8 967 aa26.2■■□□□ 1.78
PNN-205ENST00000556530 ITGB4P16144 1822 aa26.19■■□□□ 1.78
PNN-205ENST00000556530 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
PNN-205ENST00000556530 TMOD3Q9NYL9 352 aa26.19■■□□□ 1.78
PNN-205ENST00000556530 KDM6AO15550 1401 aaPredicted RBP26.19■■□□□ 1.78
PNN-205ENST00000556530 MAP3K5Q99683 1374 aa26.19■■□□□ 1.78
PNN-205ENST00000556530 BTAF1O14981 1849 aa26.18■■□□□ 1.78
PNN-205ENST00000556530 RNMTO43148 476 aaKnown RBP26.18■■□□□ 1.78
PNN-205ENST00000556530 CABP4P57796 275 aa26.18■■□□□ 1.78
PNN-205ENST00000556530 RUNDC1Q96C34 613 aa26.18■■□□□ 1.78
PNN-205ENST00000556530 ERVV-2B6SEH9 535 aa26.17■■□□□ 1.78
PNN-205ENST00000556530 EZH2Q15910 746 aaKnown RBP26.17■■□□□ 1.78
PNN-205ENST00000556530 MIER1Q8N108 512 aa26.17■■□□□ 1.78
PNN-205ENST00000556530 NFE2L2Q16236 605 aa26.16■■□□□ 1.78
PNN-205ENST00000556530 FAM9BQ8IZU0 186 aa26.16■■□□□ 1.78
PNN-205ENST00000556530 PIGBQ92521 554 aa26.16■■□□□ 1.78
PNN-205ENST00000556530 RTF1Q92541 710 aaKnown RBP26.15■■□□□ 1.78
PNN-205ENST00000556530 VIRMAQ69YN4 1812 aaKnown RBP26.15■■□□□ 1.78
PNN-205ENST00000556530 SCN11AQ9UI33 1791 aa26.15■■□□□ 1.78
PNN-205ENST00000556530 RRP7AQ9Y3A4 280 aaKnown RBP26.14■■□□□ 1.78
PNN-205ENST00000556530 NEUROD2Q15784 382 aa26.13■■□□□ 1.77
PNN-205ENST00000556530 NFATC2IPQ8NCF5 419 aa26.13■■□□□ 1.77
PNN-205ENST00000556530 IL17REQ8NFR9 667 aa26.13■■□□□ 1.77
PNN-205ENST00000556530 CAMKK2Q96RR4 588 aa26.13■■□□□ 1.77
PNN-205ENST00000556530 PLSCR1O15162 318 aa26.12■■□□□ 1.77
PNN-205ENST00000556530 DCTN1Q14203 1278 aa26.12■■□□□ 1.77
PNN-205ENST00000556530 MCM10Q7L590 875 aa26.12■■□□□ 1.77
PNN-205ENST00000556530 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
PNN-205ENST00000556530 CCER2I3L3R5 266 aa26.11■■□□□ 1.77
PNN-205ENST00000556530 RIPK4P57078 832 aa26.11■■□□□ 1.77
PNN-205ENST00000556530 TMPOP42166 694 aaKnown RBP26.1■■□□□ 1.77
PNN-205ENST00000556530 SLC52A2Q9HAB3 445 aa26.1■■□□□ 1.77
PNN-205ENST00000556530 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms