RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
SRSF5-214ENST00000556436 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
SRSF5-214ENST00000556436 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
SRSF5-214ENST00000556436 EXOC5O00471 708 aa17.62■□□□□ 0.41
SRSF5-214ENST00000556436 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
SRSF5-214ENST00000556436 HMOX1P09601 288 aa17.62■□□□□ 0.41
SRSF5-214ENST00000556436 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
SRSF5-214ENST00000556436 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
SRSF5-214ENST00000556436 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
SRSF5-214ENST00000556436 ANP32CO43423 234 aa17.59■□□□□ 0.41
SRSF5-214ENST00000556436 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
SRSF5-214ENST00000556436 BCL9O00512 1426 aa17.58■□□□□ 0.41
SRSF5-214ENST00000556436 PLEKHG2Q9H7P9 1386 aa17.58■□□□□ 0.4
SRSF5-214ENST00000556436 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
SRSF5-214ENST00000556436 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
SRSF5-214ENST00000556436 KAT6BQ8WYB5 2073 aa17.57■□□□□ 0.4
SRSF5-214ENST00000556436 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
SRSF5-214ENST00000556436 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
SRSF5-214ENST00000556436 CYP27B1O15528 508 aa17.57■□□□□ 0.4
SRSF5-214ENST00000556436 SOCS7O14512 581 aa17.56■□□□□ 0.4
SRSF5-214ENST00000556436 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
SRSF5-214ENST00000556436 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRSF5-214ENST00000556436 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRSF5-214ENST00000556436 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
SRSF5-214ENST00000556436 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
SRSF5-214ENST00000556436 FAM196AQ6ZSG2 479 aa17.55■□□□□ 0.4
SRSF5-214ENST00000556436 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
SRSF5-214ENST00000556436 PTF1AQ7RTS3 328 aa17.54■□□□□ 0.4
SRSF5-214ENST00000556436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.42e-27■■□□□ 12.3
SRSF5-214ENST00000556436 SPG7Q9UQ90 795 aa17.54■□□□□ 0.4
SRSF5-214ENST00000556436 TRIM37O94972 964 aa17.53■□□□□ 0.4
SRSF5-214ENST00000556436 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
SRSF5-214ENST00000556436 BTAF1O14981 1849 aa17.53■□□□□ 0.4
SRSF5-214ENST00000556436 ITGB4P16144 1822 aa17.53■□□□□ 0.4
SRSF5-214ENST00000556436 PHKG2P15735 406 aa17.52■□□□□ 0.4
SRSF5-214ENST00000556436 PLEKHO1Q53GL0 409 aaPredicted RBP17.52■□□□□ 0.4
SRSF5-214ENST00000556436 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
SRSF5-214ENST00000556436 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
SRSF5-214ENST00000556436 KDM6AO15550 1401 aaPredicted RBP17.51■□□□□ 0.39
SRSF5-214ENST00000556436 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
SRSF5-214ENST00000556436 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
SRSF5-214ENST00000556436 KCNQ2O43526 872 aa17.5■□□□□ 0.39
SRSF5-214ENST00000556436 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
SRSF5-214ENST00000556436 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
SRSF5-214ENST00000556436 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
SRSF5-214ENST00000556436 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
SRSF5-214ENST00000556436 FCHSD2O94868 740 aa17.49■□□□□ 0.39
SRSF5-214ENST00000556436 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
SRSF5-214ENST00000556436 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
SRSF5-214ENST00000556436 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
SRSF5-214ENST00000556436 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
SRSF5-214ENST00000556436 MRS2Q9HD23 443 aa17.47■□□□□ 0.39
SRSF5-214ENST00000556436 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
SRSF5-214ENST00000556436 RGPD4Q7Z3J3 1758 aa17.47■□□□□ 0.39
SRSF5-214ENST00000556436 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
SRSF5-214ENST00000556436 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
SRSF5-214ENST00000556436 MRC1P22897 1456 aa17.45■□□□□ 0.38
SRSF5-214ENST00000556436 MAP3K5Q99683 1374 aa17.45■□□□□ 0.38
SRSF5-214ENST00000556436 PRIM1P49642 420 aaKnown RBP17.45■□□□□ 0.38
SRSF5-214ENST00000556436 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
SRSF5-214ENST00000556436 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
SRSF5-214ENST00000556436 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
SRSF5-214ENST00000556436 RREB1Q92766 1687 aa17.45■□□□□ 0.38
SRSF5-214ENST00000556436 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
SRSF5-214ENST00000556436 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
SRSF5-214ENST00000556436 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
SRSF5-214ENST00000556436 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
SRSF5-214ENST00000556436 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
SRSF5-214ENST00000556436 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
SRSF5-214ENST00000556436 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
SRSF5-214ENST00000556436 NUP188Q5SRE5 1749 aa17.42■□□□□ 0.38
SRSF5-214ENST00000556436 APBA3O96018 575 aa17.42■□□□□ 0.38
SRSF5-214ENST00000556436 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
SRSF5-214ENST00000556436 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
SRSF5-214ENST00000556436 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
SRSF5-214ENST00000556436 LY75O60449 1722 aa17.41■□□□□ 0.38
SRSF5-214ENST00000556436 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
SRSF5-214ENST00000556436 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
SRSF5-214ENST00000556436 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
SRSF5-214ENST00000556436 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
SRSF5-214ENST00000556436 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
SRSF5-214ENST00000556436 BAG6P46379 1132 aa17.4■□□□□ 0.38
SRSF5-214ENST00000556436 PIGBQ92521 554 aa17.4■□□□□ 0.38
SRSF5-214ENST00000556436 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
SRSF5-214ENST00000556436 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
SRSF5-214ENST00000556436 MIER1Q8N108 512 aa17.39■□□□□ 0.37
SRSF5-214ENST00000556436 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
SRSF5-214ENST00000556436 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
SRSF5-214ENST00000556436 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
SRSF5-214ENST00000556436 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
SRSF5-214ENST00000556436 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
SRSF5-214ENST00000556436 ERVV-2B6SEH9 535 aa17.37■□□□□ 0.37
SRSF5-214ENST00000556436 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
SRSF5-214ENST00000556436 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
SRSF5-214ENST00000556436 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
SRSF5-214ENST00000556436 NEFMP07197 916 aa17.36■□□□□ 0.37
SRSF5-214ENST00000556436 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
SRSF5-214ENST00000556436 MCM10Q7L590 875 aa17.36■□□□□ 0.37
SRSF5-214ENST00000556436 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
SRSF5-214ENST00000556436 PLSCR1O15162 318 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms