RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
SUPT16H-205ENST00000556217 DOT1LQ8TEK3 1739 aa21.73■■□□□ 1.07
SUPT16H-205ENST00000556217 HOXC9P31274 260 aa21.73■■□□□ 1.07
SUPT16H-205ENST00000556217 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
SUPT16H-205ENST00000556217 ANKRD36BQ8N2N9 1353 aa21.73■■□□□ 1.07
SUPT16H-205ENST00000556217 TESK2Q96S53 571 aa21.72■■□□□ 1.07
SUPT16H-205ENST00000556217 RGPD2P0DJD1 1756 aa21.71■■□□□ 1.07
SUPT16H-205ENST00000556217 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
SUPT16H-205ENST00000556217 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
SUPT16H-205ENST00000556217 ZCRB1Q8TBF4 217 aaKnown RBP21.71■■□□□ 1.07
SUPT16H-205ENST00000556217 LY75O60449 1722 aa21.7■■□□□ 1.06
SUPT16H-205ENST00000556217 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.06
SUPT16H-205ENST00000556217 PRIM1P49642 420 aaKnown RBP21.7■■□□□ 1.06
SUPT16H-205ENST00000556217 TFCP2L1Q9NZI6 479 aa21.7■■□□□ 1.06
SUPT16H-205ENST00000556217 RTL1A6NKG5 1358 aa21.7■■□□□ 1.06
SUPT16H-205ENST00000556217 COL24A1Q17RW2 1714 aa21.69■■□□□ 1.06
SUPT16H-205ENST00000556217 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
SUPT16H-205ENST00000556217 PNPLA7Q6ZV29 1317 aa21.68■■□□□ 1.06
SUPT16H-205ENST00000556217 MEGF6O75095 1541 aa21.66■■□□□ 1.06
SUPT16H-205ENST00000556217 SMG6Q86US8 1419 aaKnown RBP21.66■■□□□ 1.06
SUPT16H-205ENST00000556217 CGNL1Q0VF96 1302 aa21.66■■□□□ 1.06
SUPT16H-205ENST00000556217 NLGN2Q8NFZ4 835 aa21.66■■□□□ 1.06
SUPT16H-205ENST00000556217 FBLN1P23142 703 aa21.65■■□□□ 1.06
SUPT16H-205ENST00000556217 NSD2O96028 1365 aa21.64■■□□□ 1.06
SUPT16H-205ENST00000556217 KCNQ4P56696 695 aa21.64■■□□□ 1.05
SUPT16H-205ENST00000556217 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.05
SUPT16H-205ENST00000556217 USP47Q96K76 1375 aa21.63■■□□□ 1.05
SUPT16H-205ENST00000556217 TMF1P82094 1093 aa21.63■■□□□ 1.05
SUPT16H-205ENST00000556217 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
SUPT16H-205ENST00000556217 YBX3P16989 372 aaKnown RBP eCLIP21.62■■□□□ 1.05
SUPT16H-205ENST00000556217 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
SUPT16H-205ENST00000556217 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
SUPT16H-205ENST00000556217 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
SUPT16H-205ENST00000556217 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
SUPT16H-205ENST00000556217 FYB1O15117 783 aa21.61■■□□□ 1.05
SUPT16H-205ENST00000556217 HSPA6P17066 643 aa21.61■■□□□ 1.05
SUPT16H-205ENST00000556217 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
SUPT16H-205ENST00000556217 MSH5O43196 834 aa21.6■■□□□ 1.05
SUPT16H-205ENST00000556217 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
SUPT16H-205ENST00000556217 GGNBP2Q9H3C7 697 aa21.6■■□□□ 1.05
SUPT16H-205ENST00000556217 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
SUPT16H-205ENST00000556217 ATP10DQ9P241 1426 aa21.6■■□□□ 1.05
SUPT16H-205ENST00000556217 CDCA8Q53HL2 280 aa21.58■■□□□ 1.05
SUPT16H-205ENST00000556217 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
SUPT16H-205ENST00000556217 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
SUPT16H-205ENST00000556217 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
SUPT16H-205ENST00000556217 C5P01031 1676 aa21.57■■□□□ 1.04
SUPT16H-205ENST00000556217 INSRP06213 1382 aa21.57■■□□□ 1.04
SUPT16H-205ENST00000556217 KIF24Q5T7B8 1368 aa21.57■■□□□ 1.04
SUPT16H-205ENST00000556217 FLT4P35916 1363 aa21.56■■□□□ 1.04
SUPT16H-205ENST00000556217 COL23A1Q86Y22 540 aaPredicted RBP21.55■■□□□ 1.04
SUPT16H-205ENST00000556217 HSP90AB2PQ58FF8 381 aa21.54■■□□□ 1.04
SUPT16H-205ENST00000556217 FLAD1Q8NFF5 587 aa21.54■■□□□ 1.04
SUPT16H-205ENST00000556217 TAF1LQ8IZX4 1826 aa21.53■■□□□ 1.04
SUPT16H-205ENST00000556217 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
SUPT16H-205ENST00000556217 ITGB4P16144 1822 aa21.51■■□□□ 1.03
SUPT16H-205ENST00000556217 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
SUPT16H-205ENST00000556217 SMARCC1Q92922 1105 aaPredicted RBP21.5■■□□□ 1.03
SUPT16H-205ENST00000556217 CD2APQ9Y5K6 639 aa21.5■■□□□ 1.03
SUPT16H-205ENST00000556217 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
SUPT16H-205ENST00000556217 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
SUPT16H-205ENST00000556217 ZNF526Q8TF50 670 aaPredicted RBP21.49■■□□□ 1.03
SUPT16H-205ENST00000556217 ADCY9O60503 1353 aa21.48■■□□□ 1.03
SUPT16H-205ENST00000556217 C4BP0C0L5 1744 aa21.47■■□□□ 1.03
SUPT16H-205ENST00000556217 TOGARAM1Q9Y4F4 1720 aa21.47■■□□□ 1.03
SUPT16H-205ENST00000556217 CYP27B1O15528 508 aa21.47■■□□□ 1.03
SUPT16H-205ENST00000556217 AK7Q96M32 723 aa21.46■■□□□ 1.03
SUPT16H-205ENST00000556217 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
SUPT16H-205ENST00000556217 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
SUPT16H-205ENST00000556217 EMILIN1Q9Y6C2 1016 aa21.45■■□□□ 1.02
SUPT16H-205ENST00000556217 ANKRD26Q9UPS8 1709 aa21.44■■□□□ 1.02
SUPT16H-205ENST00000556217 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
SUPT16H-205ENST00000556217 CARD14Q9BXL6 1004 aa21.44■■□□□ 1.02
SUPT16H-205ENST00000556217 MAP2P11137 1827 aaKnown RBP21.43■■□□□ 1.02
SUPT16H-205ENST00000556217 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
SUPT16H-205ENST00000556217 NCAPD2Q15021 1401 aa21.42■■□□□ 1.02
SUPT16H-205ENST00000556217 NKX1-1Q15270 411 aaPredicted RBP21.42■■□□□ 1.02
SUPT16H-205ENST00000556217 APLP1P51693 650 aa21.41■■□□□ 1.02
SUPT16H-205ENST00000556217 PIGBQ92521 554 aa21.41■■□□□ 1.02
SUPT16H-205ENST00000556217 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
SUPT16H-205ENST00000556217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.4■■□□□ 1.021e-7■■□□□ 13.6
SUPT16H-205ENST00000556217 PHF14O94880 888 aa21.39■■□□□ 1.01
SUPT16H-205ENST00000556217 KIF3CO14782 793 aa21.38■■□□□ 1.01
SUPT16H-205ENST00000556217 SSFA2P28290 1259 aa21.38■■□□□ 1.01
SUPT16H-205ENST00000556217 TMOD3Q9NYL9 352 aa21.38■■□□□ 1.01
SUPT16H-205ENST00000556217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.37■■□□□ 1.01
SUPT16H-205ENST00000556217 LOC102724428A0A0B4J2F2 783 aa21.37■■□□□ 1.01
SUPT16H-205ENST00000556217 SIK1P57059 783 aa21.37■■□□□ 1.01
SUPT16H-205ENST00000556217 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
SUPT16H-205ENST00000556217 EYA1Q99502 592 aa21.36■■□□□ 1.01
SUPT16H-205ENST00000556217 IFNL2Q8IZJ0 200 aa21.35■■□□□ 1.01
SUPT16H-205ENST00000556217 TIMELESSQ9UNS1 1208 aa21.35■■□□□ 1.01
SUPT16H-205ENST00000556217 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
SUPT16H-205ENST00000556217 AMIGO3Q86WK7 504 aa21.34■■□□□ 1.01
SUPT16H-205ENST00000556217 DNAJC5GQ8N7S2 189 aa21.34■■□□□ 1.01
SUPT16H-205ENST00000556217 LINC00116Q8NCU8 138 aa21.34■■□□□ 1.01
SUPT16H-205ENST00000556217 PLEKHG2Q9H7P9 1386 aa21.33■■□□□ 1
SUPT16H-205ENST00000556217 GNPATO15228 680 aa21.32■■□□□ 1
SUPT16H-205ENST00000556217 PHKG2P15735 406 aa21.32■■□□□ 1
SUPT16H-205ENST00000556217 ATP6V1AP38606 617 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms