RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 SHANK3Q9BYB0 1731 aa29.91■■■□□ 2.38
SDR39U1-216ENST00000556175 HSP90AB2PQ58FF8 381 aa29.9■■■□□ 2.38
SDR39U1-216ENST00000556175 DOT1LQ8TEK3 1739 aa29.9■■■□□ 2.38
SDR39U1-216ENST00000556175 ZBTB7AO95365 584 aa29.89■■■□□ 2.38
SDR39U1-216ENST00000556175 SLC27A3Q5K4L6 730 aa29.89■■■□□ 2.38
SDR39U1-216ENST00000556175 SYTL4Q96C24 671 aaPredicted RBP29.89■■■□□ 2.38
SDR39U1-216ENST00000556175 PDGFDQ9GZP0 370 aaPredicted RBP29.89■■■□□ 2.38
SDR39U1-216ENST00000556175 TATP17735 454 aaPredicted RBP29.88■■■□□ 2.37
SDR39U1-216ENST00000556175 USHBP1Q8N6Y0 703 aa29.87■■■□□ 2.37
SDR39U1-216ENST00000556175 CCER1Q8TC90 406 aaPredicted RBP29.87■■■□□ 2.37
SDR39U1-216ENST00000556175 DCAF8L1A6NGE4 600 aa29.86■■■□□ 2.37
SDR39U1-216ENST00000556175 EIF4G2P78344 907 aaKnown RBP eCLIP29.86■■■□□ 2.37
SDR39U1-216ENST00000556175 MTFR1LQ9H019 292 aa29.86■■■□□ 2.37
SDR39U1-216ENST00000556175 PRIM1P49642 420 aaKnown RBP29.85■■■□□ 2.37
SDR39U1-216ENST00000556175 ANKRD26Q9UPS8 1709 aa29.84■■■□□ 2.37
SDR39U1-216ENST00000556175 PCDH11XQ9BZA7 1347 aa29.83■■■□□ 2.37
SDR39U1-216ENST00000556175 PCDH11YQ9BZA8 1340 aa29.83■■■□□ 2.37
SDR39U1-216ENST00000556175 POLR3GLQ9BT43 218 aa29.83■■■□□ 2.37
SDR39U1-216ENST00000556175 LRRC4BQ9NT99 713 aa29.83■■■□□ 2.37
SDR39U1-216ENST00000556175 EMILIN1Q9Y6C2 1016 aa29.83■■■□□ 2.37
SDR39U1-216ENST00000556175 PTGER2P43116 358 aa29.82■■■□□ 2.36
SDR39U1-216ENST00000556175 ATF5Q9Y2D1 282 aaPredicted RBP29.82■■■□□ 2.36
SDR39U1-216ENST00000556175 NSD2O96028 1365 aa29.81■■■□□ 2.36
SDR39U1-216ENST00000556175 ZNF827Q17R98 1081 aa29.8■■■□□ 2.36
SDR39U1-216ENST00000556175 PPM1GO15355 546 aaPredicted RBP29.79■■■□□ 2.36
SDR39U1-216ENST00000556175 LY75O60449 1722 aa29.79■■■□□ 2.36
SDR39U1-216ENST00000556175 AKT1S1Q96B36 256 aa29.78■■■□□ 2.36
SDR39U1-216ENST00000556175 QSER1Q2KHR3 1735 aa29.78■■■□□ 2.36
SDR39U1-216ENST00000556175 WASHC2AQ641Q2 1341 aa29.77■■■□□ 2.36
SDR39U1-216ENST00000556175 HSPA5P11021 654 aaKnown RBP29.77■■■□□ 2.36
SDR39U1-216ENST00000556175 NCAPD2Q15021 1401 aa29.76■■■□□ 2.35
SDR39U1-216ENST00000556175 MAP2P11137 1827 aaKnown RBP29.75■■■□□ 2.35
SDR39U1-216ENST00000556175 PKD1L3Q7Z443 1732 aa29.74■■■□□ 2.35
SDR39U1-216ENST00000556175 SLC16A10Q8TF71 515 aa29.73■■■□□ 2.35
SDR39U1-216ENST00000556175 SGIP1Q9BQI5 828 aa29.73■■■□□ 2.35
SDR39U1-216ENST00000556175 CCNL1Q9UK58 526 aaPredicted RBP29.73■■■□□ 2.35
SDR39U1-216ENST00000556175 HMGB2P26583 209 aaKnown RBP29.72■■■□□ 2.35
SDR39U1-216ENST00000556175 TFCP2L1Q9NZI6 479 aa29.71■■■□□ 2.35
SDR39U1-216ENST00000556175 POLKQ9UBT6 870 aa29.71■■■□□ 2.35
SDR39U1-216ENST00000556175 ARXQ96QS3 562 aa29.69■■■□□ 2.34
SDR39U1-216ENST00000556175 FHDC1Q9C0D6 1143 aaPredicted RBP29.69■■■□□ 2.34
SDR39U1-216ENST00000556175 SPG7Q9UQ90 795 aa29.69■■■□□ 2.34
SDR39U1-216ENST00000556175 PNPLA7Q6ZV29 1317 aa29.69■■■□□ 2.34
SDR39U1-216ENST00000556175 CYP27B1O15528 508 aa29.68■■■□□ 2.34
SDR39U1-216ENST00000556175 PANK3Q9H999 370 aa29.68■■■□□ 2.34
SDR39U1-216ENST00000556175 KCNQ4P56696 695 aa29.67■■■□□ 2.34
SDR39U1-216ENST00000556175 YY1P25490 414 aa29.66■■■□□ 2.34
SDR39U1-216ENST00000556175 EYA1Q99502 592 aa29.66■■■□□ 2.34
SDR39U1-216ENST00000556175 SYT17Q9BSW7 474 aa29.66■■■□□ 2.34
SDR39U1-216ENST00000556175 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.66■■■□□ 2.34
SDR39U1-216ENST00000556175 TUBGCP6Q96RT7 1819 aa29.66■■■□□ 2.34
SDR39U1-216ENST00000556175 TNNT2P45379 298 aaPredicted RBP29.65■■■□□ 2.34
SDR39U1-216ENST00000556175 MPRIPQ6WCQ1 1025 aa29.65■■■□□ 2.34
SDR39U1-216ENST00000556175 MAP3K5Q99683 1374 aa29.64■■■□□ 2.34
SDR39U1-216ENST00000556175 PLEKHG2Q9H7P9 1386 aa29.64■■■□□ 2.34
SDR39U1-216ENST00000556175 POLD1P28340 1107 aa29.64■■■□□ 2.34
SDR39U1-216ENST00000556175 PALLDQ8WX93 1383 aa29.64■■■□□ 2.33
SDR39U1-216ENST00000556175 TOGARAM1Q9Y4F4 1720 aa29.63■■■□□ 2.33
SDR39U1-216ENST00000556175 NKX1-1Q15270 411 aaPredicted RBP29.62■■■□□ 2.33
SDR39U1-216ENST00000556175 SMARCC1Q92922 1105 aaPredicted RBP29.62■■■□□ 2.33
SDR39U1-216ENST00000556175 C5P01031 1676 aa29.62■■■□□ 2.33
SDR39U1-216ENST00000556175 EIF4A2Q14240 407 aaKnown RBP29.61■■■□□ 2.33
SDR39U1-216ENST00000556175 COL24A1Q17RW2 1714 aa29.61■■■□□ 2.33
SDR39U1-216ENST00000556175 ITGB4P16144 1822 aa29.61■■■□□ 2.33
SDR39U1-216ENST00000556175 IFNL2Q8IZJ0 200 aa29.57■■■□□ 2.32
SDR39U1-216ENST00000556175 MORC1Q86VD1 984 aa29.56■■■□□ 2.32
SDR39U1-216ENST00000556175 KNSTRNQ9Y448 316 aa29.56■■■□□ 2.32
SDR39U1-216ENST00000556175 IGSF1Q8N6C5 1336 aa29.55■■■□□ 2.32
SDR39U1-216ENST00000556175 MSH5O43196 834 aa29.55■■■□□ 2.32
SDR39U1-216ENST00000556175 FLAD1Q8NFF5 587 aa29.55■■■□□ 2.32
SDR39U1-216ENST00000556175 TAF1LQ8IZX4 1826 aa29.55■■■□□ 2.32
SDR39U1-216ENST00000556175 PHKG2P15735 406 aa29.54■■■□□ 2.32
SDR39U1-216ENST00000556175 PIGBQ92521 554 aa29.54■■■□□ 2.32
SDR39U1-216ENST00000556175 TMOD3Q9NYL9 352 aa29.54■■■□□ 2.32
SDR39U1-216ENST00000556175 COL23A1Q86Y22 540 aaPredicted RBP29.52■■■□□ 2.32
SDR39U1-216ENST00000556175 KLHL34Q8N239 644 aa29.5■■■□□ 2.31
SDR39U1-216ENST00000556175 C4BP0C0L5 1744 aa29.5■■■□□ 2.31
SDR39U1-216ENST00000556175 AK7Q96M32 723 aa29.49■■■□□ 2.31
SDR39U1-216ENST00000556175 HSP90AB1P08238 724 aaKnown RBP29.47■■■□□ 2.31
SDR39U1-216ENST00000556175 KIF7Q2M1P5 1343 aa29.46■■■□□ 2.31
SDR39U1-216ENST00000556175 PLEKHO1Q53GL0 409 aaPredicted RBP29.46■■■□□ 2.31
SDR39U1-216ENST00000556175 LOC102724428A0A0B4J2F2 783 aa29.45■■■□□ 2.31
SDR39U1-216ENST00000556175 SIK1P57059 783 aa29.45■■■□□ 2.31
SDR39U1-216ENST00000556175 AMOTQ4VCS5 1084 aa29.45■■■□□ 2.31
SDR39U1-216ENST00000556175 UTRNP46939 3433 aa29.45■■■□□ 2.3
SDR39U1-216ENST00000556175 ERVV-2B6SEH9 535 aa29.42■■■□□ 2.3
SDR39U1-216ENST00000556175 GPR162Q16538 588 aa29.42■■■□□ 2.3
SDR39U1-216ENST00000556175 DCAF5Q96JK2 942 aa29.42■■■□□ 2.3
SDR39U1-216ENST00000556175 AMER1Q5JTC6 1135 aaPredicted RBP29.41■■■□□ 2.3
SDR39U1-216ENST00000556175 MSL1Q68DK7 614 aa29.41■■■□□ 2.3
SDR39U1-216ENST00000556175 ASAP1Q9ULH1 1129 aa29.41■■■□□ 2.3
SDR39U1-216ENST00000556175 UBR3Q6ZT12 1888 aa29.4■■■□□ 2.3
SDR39U1-216ENST00000556175 CHD4Q14839 1912 aa29.4■■■□□ 2.3
SDR39U1-216ENST00000556175 SSFA2P28290 1259 aa29.39■■■□□ 2.3
SDR39U1-216ENST00000556175 ZNF530Q6P9A1 599 aaPredicted RBP29.39■■■□□ 2.3
SDR39U1-216ENST00000556175 ATP6V1AP38606 617 aa29.38■■■□□ 2.29
SDR39U1-216ENST00000556175 ATG3Q9NT62 314 aa29.38■■■□□ 2.29
SDR39U1-216ENST00000556175 LINC00116Q8NCU8 138 aa29.37■■■□□ 2.29
SDR39U1-216ENST00000556175 KDRP35968 1356 aa29.37■■■□□ 2.29
SDR39U1-216ENST00000556175 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms