RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PODXL2Q9NZ53 605 aa18.16■□□□□ 0.5
NEK9-209ENST00000556170 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
NEK9-209ENST00000556170 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 SRGAP3O43295 1099 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
NEK9-209ENST00000556170 KIDINS220Q9ULH0 1771 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 LAMC1P11047 1609 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
NEK9-209ENST00000556170 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.5
NEK9-209ENST00000556170 TSPOAP1O95153 1857 aa18.14■□□□□ 0.49
NEK9-209ENST00000556170 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
NEK9-209ENST00000556170 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.49
NEK9-209ENST00000556170 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
NEK9-209ENST00000556170 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
NEK9-209ENST00000556170 HSP90AA2PQ14568 343 aaPredicted RBP18.12■□□□□ 0.49
NEK9-209ENST00000556170 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
NEK9-209ENST00000556170 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
NEK9-209ENST00000556170 ERC2O15083 957 aa18.12■□□□□ 0.49
NEK9-209ENST00000556170 RABEP1Q15276 862 aa18.12■□□□□ 0.49
NEK9-209ENST00000556170 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
NEK9-209ENST00000556170 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
NEK9-209ENST00000556170 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
NEK9-209ENST00000556170 GLI2P10070 1586 aa18.11■□□□□ 0.49
NEK9-209ENST00000556170 MYL6BP14649 208 aa18.11■□□□□ 0.49
NEK9-209ENST00000556170 SDSP20132 328 aa18.11■□□□□ 0.49
NEK9-209ENST00000556170 SIL1Q9H173 461 aa18.11■□□□□ 0.49
NEK9-209ENST00000556170 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
NEK9-209ENST00000556170 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 SSFA2P28290 1259 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 TNPO1Q92973 898 aaKnown RBP18.1■□□□□ 0.49
NEK9-209ENST00000556170 GPATCH3Q96I76 525 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
NEK9-209ENST00000556170 A0A0U1RQG5 324 aaPredicted RBP18.09■□□□□ 0.49
NEK9-209ENST00000556170 CHL1O00533 1208 aa18.09■□□□□ 0.49
NEK9-209ENST00000556170 TTC22Q5TAA0 569 aa18.09■□□□□ 0.49
NEK9-209ENST00000556170 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
NEK9-209ENST00000556170 USP19O94966 1318 aa18.09■□□□□ 0.49
NEK9-209ENST00000556170 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
NEK9-209ENST00000556170 PRPF40AO75400 957 aaKnown RBP18.08■□□□□ 0.49
NEK9-209ENST00000556170 ATF3P18847 181 aa18.08■□□□□ 0.49
NEK9-209ENST00000556170 NEXNQ0ZGT2 675 aa18.08■□□□□ 0.49
NEK9-209ENST00000556170 CAVIN1Q6NZI2 390 aaKnown RBP18.08■□□□□ 0.49
NEK9-209ENST00000556170 PTPRCP08575 1304 aa18.08■□□□□ 0.48
NEK9-209ENST00000556170 ARHGAP31Q2M1Z3 1444 aa18.07■□□□□ 0.48
NEK9-209ENST00000556170 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
NEK9-209ENST00000556170 MX1P20591 662 aa18.07■□□□□ 0.48
NEK9-209ENST00000556170 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
NEK9-209ENST00000556170 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
NEK9-209ENST00000556170 LARP6Q9BRS8 491 aaKnown RBP18.07■□□□□ 0.48
NEK9-209ENST00000556170 G3BP1Q13283 466 aaKnown RBP eCLIP18.07■□□□□ 0.482e-6■□□□□ 8.1
NEK9-209ENST00000556170 NUCB2P80303 420 aa18.07■□□□□ 0.48
NEK9-209ENST00000556170 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
NEK9-209ENST00000556170 PHAXQ9H814 394 aaKnown RBP18.06■□□□□ 0.48
NEK9-209ENST00000556170 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
NEK9-209ENST00000556170 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
NEK9-209ENST00000556170 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
NEK9-209ENST00000556170 SIRT2Q8IXJ6 389 aa18.05■□□□□ 0.48
NEK9-209ENST00000556170 LMTK2Q8IWU2 1503 aa18.05■□□□□ 0.48
NEK9-209ENST00000556170 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
NEK9-209ENST00000556170 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
NEK9-209ENST00000556170 FLT4P35916 1363 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 MSH6P52701 1360 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
NEK9-209ENST00000556170 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 GOLGA6L4A6NEF3 574 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 HOXC9P31274 260 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 PLEKHG3A1L390 1219 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 PTMSP20962 102 aa18.04■□□□□ 0.48
NEK9-209ENST00000556170 DNTTIP2Q5QJE6 756 aaKnown RBP18.03■□□□□ 0.48
NEK9-209ENST00000556170 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
NEK9-209ENST00000556170 RNF214Q8ND24 703 aa18.03■□□□□ 0.48
NEK9-209ENST00000556170 CHPF2Q9P2E5 772 aa18.03■□□□□ 0.48
NEK9-209ENST00000556170 JARID2Q92833 1246 aaPredicted RBP18.03■□□□□ 0.48
NEK9-209ENST00000556170 ADGRB1O14514 1584 aa18.03■□□□□ 0.48
NEK9-209ENST00000556170 MSNP26038 577 aaKnown RBP18.03■□□□□ 0.48
NEK9-209ENST00000556170 PDE1AP54750 535 aa18.03■□□□□ 0.48
NEK9-209ENST00000556170 A2ML1A8K2U0 1454 aa18.02■□□□□ 0.48
NEK9-209ENST00000556170 LGR6Q9HBX8 967 aa18.02■□□□□ 0.47
NEK9-209ENST00000556170 MRE11P49959 708 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 GORABQ5T7V8 394 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
NEK9-209ENST00000556170 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 MROH2AA6NES4 1674 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
NEK9-209ENST00000556170 CNTROBQ8N137 903 aa18■□□□□ 0.47
NEK9-209ENST00000556170 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
NEK9-209ENST00000556170 ABCC4O15439 1325 aa18■□□□□ 0.47
NEK9-209ENST00000556170 ZNF853P0CG23 659 aa18■□□□□ 0.47
NEK9-209ENST00000556170 GSPT1P15170 499 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms