RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 DOT1LQ8TEK3 1739 aa23.74■■□□□ 1.39
GPHN-211ENST00000556020 ZCRB1Q8TBF4 217 aaKnown RBP23.74■■□□□ 1.39
GPHN-211ENST00000556020 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
GPHN-211ENST00000556020 RAPGEF4Q8WZA2 1011 aa23.73■■□□□ 1.39
GPHN-211ENST00000556020 SYTL4Q96C24 671 aaPredicted RBP23.73■■□□□ 1.39
GPHN-211ENST00000556020 STK32BQ9NY57 414 aa23.73■■□□□ 1.39
GPHN-211ENST00000556020 KIF24Q5T7B8 1368 aa23.72■■□□□ 1.39
GPHN-211ENST00000556020 ANKRD26Q9UPS8 1709 aa23.71■■□□□ 1.39
GPHN-211ENST00000556020 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
GPHN-211ENST00000556020 SPON1Q9HCB6 807 aa23.71■■□□□ 1.39
GPHN-211ENST00000556020 CASZ1Q86V15 1759 aa23.7■■□□□ 1.39
GPHN-211ENST00000556020 TATP17735 454 aaPredicted RBP23.7■■□□□ 1.38
GPHN-211ENST00000556020 PDGFDQ9GZP0 370 aaPredicted RBP23.7■■□□□ 1.38
GPHN-211ENST00000556020 PANK3Q9H999 370 aa23.69■■□□□ 1.38
GPHN-211ENST00000556020 PPP1R1BQ9UD71 204 aaPredicted RBP23.69■■□□□ 1.38
GPHN-211ENST00000556020 PRIM1P49642 420 aaKnown RBP23.68■■□□□ 1.38
GPHN-211ENST00000556020 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
GPHN-211ENST00000556020 ZBTB7AO95365 584 aa23.66■■□□□ 1.38
GPHN-211ENST00000556020 PAPPAQ13219 1627 aa23.64■■□□□ 1.38
GPHN-211ENST00000556020 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
GPHN-211ENST00000556020 LRRC4BQ9NT99 713 aa23.63■■□□□ 1.37
GPHN-211ENST00000556020 POLKQ9UBT6 870 aa23.63■■□□□ 1.37
GPHN-211ENST00000556020 ATF5Q9Y2D1 282 aaPredicted RBP23.62■■□□□ 1.37
GPHN-211ENST00000556020 PCDH11XQ9BZA7 1347 aa23.61■■□□□ 1.37
GPHN-211ENST00000556020 PCDH11YQ9BZA8 1340 aa23.61■■□□□ 1.37
GPHN-211ENST00000556020 KCNQ4P56696 695 aa23.61■■□□□ 1.37
GPHN-211ENST00000556020 NSD2O96028 1365 aa23.61■■□□□ 1.37
GPHN-211ENST00000556020 ZNF827Q17R98 1081 aa23.6■■□□□ 1.37
GPHN-211ENST00000556020 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
GPHN-211ENST00000556020 LY75O60449 1722 aa23.59■■□□□ 1.37
GPHN-211ENST00000556020 EYA1Q99502 592 aa23.58■■□□□ 1.37
GPHN-211ENST00000556020 CYP27B1O15528 508 aa23.57■■□□□ 1.36
GPHN-211ENST00000556020 SLC27A3Q5K4L6 730 aa23.57■■□□□ 1.36
GPHN-211ENST00000556020 EIF4A2Q14240 407 aaKnown RBP23.56■■□□□ 1.36
GPHN-211ENST00000556020 MORC1Q86VD1 984 aa23.56■■□□□ 1.36
GPHN-211ENST00000556020 CCNL1Q9UK58 526 aaPredicted RBP23.55■■□□□ 1.36
GPHN-211ENST00000556020 KNSTRNQ9Y448 316 aa23.55■■□□□ 1.36
GPHN-211ENST00000556020 NCAPD2Q15021 1401 aa23.55■■□□□ 1.36
GPHN-211ENST00000556020 TOGARAM1Q9Y4F4 1720 aa23.55■■□□□ 1.36
GPHN-211ENST00000556020 KIF7Q2M1P5 1343 aa23.55■■□□□ 1.36
GPHN-211ENST00000556020 MPRIPQ6WCQ1 1025 aa23.54■■□□□ 1.36
GPHN-211ENST00000556020 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
GPHN-211ENST00000556020 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
GPHN-211ENST00000556020 ITGB4P16144 1822 aa23.54■■□□□ 1.36
GPHN-211ENST00000556020 PTGER2P43116 358 aa23.53■■□□□ 1.36
GPHN-211ENST00000556020 TUBGCP6Q96RT7 1819 aa23.53■■□□□ 1.36
GPHN-211ENST00000556020 AKT1S1Q96B36 256 aa23.52■■□□□ 1.36
GPHN-211ENST00000556020 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
GPHN-211ENST00000556020 QSER1Q2KHR3 1735 aa23.5■■□□□ 1.35
GPHN-211ENST00000556020 PNPLA7Q6ZV29 1317 aa23.47■■□□□ 1.35
GPHN-211ENST00000556020 PALLDQ8WX93 1383 aa23.47■■□□□ 1.35
GPHN-211ENST00000556020 C5P01031 1676 aa23.47■■□□□ 1.35
GPHN-211ENST00000556020 IGSF1Q8N6C5 1336 aa23.46■■□□□ 1.35
GPHN-211ENST00000556020 DCAF8L1A6NGE4 600 aa23.45■■□□□ 1.34
GPHN-211ENST00000556020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.45■■□□□ 1.343e-10■■■■□ 25.7
GPHN-211ENST00000556020 MSH5O43196 834 aa23.44■■□□□ 1.34
GPHN-211ENST00000556020 PHKG2P15735 406 aa23.44■■□□□ 1.34
GPHN-211ENST00000556020 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
GPHN-211ENST00000556020 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
GPHN-211ENST00000556020 IFNL2Q8IZJ0 200 aa23.44■■□□□ 1.34
GPHN-211ENST00000556020 PIGBQ92521 554 aa23.44■■□□□ 1.34
GPHN-211ENST00000556020 SGIP1Q9BQI5 828 aa23.44■■□□□ 1.34
GPHN-211ENST00000556020 FHDC1Q9C0D6 1143 aaPredicted RBP23.44■■□□□ 1.34
GPHN-211ENST00000556020 TAF1LQ8IZX4 1826 aa23.43■■□□□ 1.34
GPHN-211ENST00000556020 ARXQ96QS3 562 aa23.43■■□□□ 1.34
GPHN-211ENST00000556020 CNGB1Q14028 1251 aaPredicted RBP23.42■■□□□ 1.34
GPHN-211ENST00000556020 SMARCC1Q92922 1105 aaPredicted RBP23.42■■□□□ 1.34
GPHN-211ENST00000556020 TMOD3Q9NYL9 352 aa23.42■■□□□ 1.34
GPHN-211ENST00000556020 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
GPHN-211ENST00000556020 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
GPHN-211ENST00000556020 KLHL34Q8N239 644 aa23.41■■□□□ 1.34
GPHN-211ENST00000556020 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
GPHN-211ENST00000556020 POLD1P28340 1107 aa23.39■■□□□ 1.33
GPHN-211ENST00000556020 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.33
GPHN-211ENST00000556020 SYT17Q9BSW7 474 aa23.39■■□□□ 1.33
GPHN-211ENST00000556020 C4BP0C0L5 1744 aa23.37■■□□□ 1.33
GPHN-211ENST00000556020 SULT6B1Q6IMI4 303 aa23.37■■□□□ 1.33
GPHN-211ENST00000556020 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
GPHN-211ENST00000556020 COL23A1Q86Y22 540 aaPredicted RBP23.37■■□□□ 1.33
GPHN-211ENST00000556020 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
GPHN-211ENST00000556020 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
GPHN-211ENST00000556020 IL13P35225 146 aa23.35■■□□□ 1.33
GPHN-211ENST00000556020 MTHFSP49914 203 aa23.35■■□□□ 1.33
GPHN-211ENST00000556020 AK7Q96M32 723 aa23.35■■□□□ 1.33
GPHN-211ENST00000556020 COL24A1Q17RW2 1714 aa23.35■■□□□ 1.33
GPHN-211ENST00000556020 PLEKHG2Q9H7P9 1386 aa23.35■■□□□ 1.33
GPHN-211ENST00000556020 MSL1Q68DK7 614 aa23.34■■□□□ 1.33
GPHN-211ENST00000556020 LOC102724428A0A0B4J2F2 783 aa23.33■■□□□ 1.33
GPHN-211ENST00000556020 SIK1P57059 783 aa23.33■■□□□ 1.33
GPHN-211ENST00000556020 AMOTQ4VCS5 1084 aa23.33■■□□□ 1.33
GPHN-211ENST00000556020 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
GPHN-211ENST00000556020 YY1P25490 414 aa23.32■■□□□ 1.32
GPHN-211ENST00000556020 HMGB2P26583 209 aaKnown RBP23.32■■□□□ 1.32
GPHN-211ENST00000556020 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
GPHN-211ENST00000556020 PHF14O94880 888 aa23.31■■□□□ 1.32
GPHN-211ENST00000556020 ATP6V1AP38606 617 aa23.31■■□□□ 1.32
GPHN-211ENST00000556020 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
GPHN-211ENST00000556020 SMIM5Q71RC9 77 aa23.31■■□□□ 1.32
GPHN-211ENST00000556020 ATG3Q9NT62 314 aa23.31■■□□□ 1.32
GPHN-211ENST00000556020 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms