RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 EMILIN1Q9Y6C2 1016 aa11.72□□□□□ -0.53
STRN3-205ENST00000554991 NCAPD2Q15021 1401 aa11.71□□□□□ -0.53
STRN3-205ENST00000554991 KIF7Q2M1P5 1343 aa11.71□□□□□ -0.53
STRN3-205ENST00000554991 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
STRN3-205ENST00000554991 RAPGEF4Q8WZA2 1011 aa11.71□□□□□ -0.53
STRN3-205ENST00000554991 CAMKK2Q96RR4 588 aa11.71□□□□□ -0.53
STRN3-205ENST00000554991 BCL11BQ9C0K0 894 aaPredicted RBP11.71□□□□□ -0.53
STRN3-205ENST00000554991 PANK3Q9H999 370 aa11.71□□□□□ -0.53
STRN3-205ENST00000554991 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
STRN3-205ENST00000554991 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
STRN3-205ENST00000554991 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
STRN3-205ENST00000554991 NBPF14Q5TI25 921 aa11.7□□□□□ -0.54
STRN3-205ENST00000554991 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
STRN3-205ENST00000554991 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
STRN3-205ENST00000554991 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
STRN3-205ENST00000554991 KNSTRNQ9Y448 316 aa11.69□□□□□ -0.54
STRN3-205ENST00000554991 PCDH11XQ9BZA7 1347 aa11.68□□□□□ -0.54
STRN3-205ENST00000554991 PCDH11YQ9BZA8 1340 aa11.68□□□□□ -0.54
STRN3-205ENST00000554991 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
STRN3-205ENST00000554991 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
STRN3-205ENST00000554991 PLSCR1O15162 318 aa11.67□□□□□ -0.54
STRN3-205ENST00000554991 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
STRN3-205ENST00000554991 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
STRN3-205ENST00000554991 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
STRN3-205ENST00000554991 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
STRN3-205ENST00000554991 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
STRN3-205ENST00000554991 SYTL4Q96C24 671 aaPredicted RBP11.66□□□□□ -0.54
STRN3-205ENST00000554991 KCNQ2O43526 872 aa11.65□□□□□ -0.54
STRN3-205ENST00000554991 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
STRN3-205ENST00000554991 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
STRN3-205ENST00000554991 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
STRN3-205ENST00000554991 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
STRN3-205ENST00000554991 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
STRN3-205ENST00000554991 ZNF831Q5JPB2 1677 aa11.64□□□□□ -0.55
STRN3-205ENST00000554991 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
STRN3-205ENST00000554991 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
STRN3-205ENST00000554991 PLEKHG2Q9H7P9 1386 aa11.63□□□□□ -0.55
STRN3-205ENST00000554991 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
STRN3-205ENST00000554991 EYA1Q99502 592 aa11.61□□□□□ -0.55
STRN3-205ENST00000554991 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
STRN3-205ENST00000554991 IGSF1Q8N6C5 1336 aa11.6□□□□□ -0.55
STRN3-205ENST00000554991 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
STRN3-205ENST00000554991 TJP1Q07157 1748 aa11.6□□□□□ -0.55
STRN3-205ENST00000554991 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
STRN3-205ENST00000554991 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 PRIM1P49642 420 aaKnown RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 CC2D1BQ5T0F9 858 aaKnown RBP11.6□□□□□ -0.55
STRN3-205ENST00000554991 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
STRN3-205ENST00000554991 COL3A1P02461 1466 aaPredicted RBP11.59□□□□□ -0.55
STRN3-205ENST00000554991 PPP1R1BQ9UD71 204 aaPredicted RBP11.59□□□□□ -0.55
STRN3-205ENST00000554991 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
STRN3-205ENST00000554991 CHD4Q14839 1912 aa11.58□□□□□ -0.55
STRN3-205ENST00000554991 PALLDQ8WX93 1383 aa11.58□□□□□ -0.56
STRN3-205ENST00000554991 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
STRN3-205ENST00000554991 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
STRN3-205ENST00000554991 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
STRN3-205ENST00000554991 CYP27B1O15528 508 aa11.57□□□□□ -0.56
STRN3-205ENST00000554991 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
STRN3-205ENST00000554991 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
STRN3-205ENST00000554991 CCNL1Q9UK58 526 aaPredicted RBP11.57□□□□□ -0.56
STRN3-205ENST00000554991 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
STRN3-205ENST00000554991 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
STRN3-205ENST00000554991 PROM2Q8N271 834 aa11.56□□□□□ -0.56
STRN3-205ENST00000554991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.561e-8■■■□□ 16
STRN3-205ENST00000554991 KDRP35968 1356 aa11.55□□□□□ -0.56
STRN3-205ENST00000554991 PHKG2P15735 406 aa11.55□□□□□ -0.56
STRN3-205ENST00000554991 MRC1P22897 1456 aa11.55□□□□□ -0.56
STRN3-205ENST00000554991 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
STRN3-205ENST00000554991 ZBTB7AO95365 584 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 MTHFSP49914 203 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 ZNF827Q17R98 1081 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
STRN3-205ENST00000554991 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
STRN3-205ENST00000554991 MYH14Q7Z406 1995 aaKnown RBP11.54□□□□□ -0.56
STRN3-205ENST00000554991 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
STRN3-205ENST00000554991 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
STRN3-205ENST00000554991 AMOTQ4VCS5 1084 aa11.53□□□□□ -0.56
STRN3-205ENST00000554991 PLEKHO1Q53GL0 409 aaPredicted RBP11.53□□□□□ -0.56
STRN3-205ENST00000554991 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
STRN3-205ENST00000554991 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
STRN3-205ENST00000554991 LRRC4BQ9NT99 713 aa11.53□□□□□ -0.56
STRN3-205ENST00000554991 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
STRN3-205ENST00000554991 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
STRN3-205ENST00000554991 IL13P35225 146 aa11.52□□□□□ -0.57
STRN3-205ENST00000554991 KCNQ4P56696 695 aa11.52□□□□□ -0.57
STRN3-205ENST00000554991 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
STRN3-205ENST00000554991 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
STRN3-205ENST00000554991 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.57
STRN3-205ENST00000554991 HMGB2P26583 209 aaKnown RBP11.51□□□□□ -0.57
STRN3-205ENST00000554991 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
STRN3-205ENST00000554991 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
STRN3-205ENST00000554991 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
STRN3-205ENST00000554991 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
STRN3-205ENST00000554991 MSH5O43196 834 aa11.5□□□□□ -0.57
STRN3-205ENST00000554991 HMOX1P09601 288 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms