RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
XRCC3-210ENST00000554974 KIF20BQ96Q89 1820 aa21.17■□□□□ 0.98
XRCC3-210ENST00000554974 CHD4Q14839 1912 aa21.16■□□□□ 0.98
XRCC3-210ENST00000554974 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
XRCC3-210ENST00000554974 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
XRCC3-210ENST00000554974 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
XRCC3-210ENST00000554974 GOLGB1Q14789 3259 aaKnown RBP21.15■□□□□ 0.98
XRCC3-210ENST00000554974 MAP3K5Q99683 1374 aa21.15■□□□□ 0.98
XRCC3-210ENST00000554974 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
XRCC3-210ENST00000554974 SLC27A3Q5K4L6 730 aa21.15■□□□□ 0.98
XRCC3-210ENST00000554974 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
XRCC3-210ENST00000554974 USHBP1Q8N6Y0 703 aa21.14■□□□□ 0.97
XRCC3-210ENST00000554974 USP47Q96K76 1375 aa21.13■□□□□ 0.97
XRCC3-210ENST00000554974 ZNF784Q8NCA9 323 aaPredicted RBP21.13■□□□□ 0.97
XRCC3-210ENST00000554974 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
XRCC3-210ENST00000554974 GGNBP2Q9H3C7 697 aa21.13■□□□□ 0.97
XRCC3-210ENST00000554974 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
XRCC3-210ENST00000554974 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
XRCC3-210ENST00000554974 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
XRCC3-210ENST00000554974 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
XRCC3-210ENST00000554974 FYB1O15117 783 aa21.1■□□□□ 0.97
XRCC3-210ENST00000554974 SMG6Q86US8 1419 aaKnown RBP21.1■□□□□ 0.97
XRCC3-210ENST00000554974 TMF1P82094 1093 aa21.09■□□□□ 0.97
XRCC3-210ENST00000554974 C5P01031 1676 aa21.09■□□□□ 0.97
XRCC3-210ENST00000554974 SLC24A1O60721 1099 aa21.08■□□□□ 0.97
XRCC3-210ENST00000554974 SLC16A10Q8TF71 515 aa21.08■□□□□ 0.97
XRCC3-210ENST00000554974 CCNL1Q9UK58 526 aaPredicted RBP21.08■□□□□ 0.97
XRCC3-210ENST00000554974 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
XRCC3-210ENST00000554974 POLD1P28340 1107 aa21.07■□□□□ 0.96
XRCC3-210ENST00000554974 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
XRCC3-210ENST00000554974 RAPGEF4Q8WZA2 1011 aa21.06■□□□□ 0.96
XRCC3-210ENST00000554974 GPR162Q16538 588 aa21.05■□□□□ 0.96
XRCC3-210ENST00000554974 FLT4P35916 1363 aa21.05■□□□□ 0.96
XRCC3-210ENST00000554974 NLGN2Q8NFZ4 835 aa21.04■□□□□ 0.96
XRCC3-210ENST00000554974 INSRP06213 1382 aa21.04■□□□□ 0.96
XRCC3-210ENST00000554974 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
XRCC3-210ENST00000554974 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
XRCC3-210ENST00000554974 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
XRCC3-210ENST00000554974 PKD1L3Q7Z443 1732 aa21.03■□□□□ 0.96
XRCC3-210ENST00000554974 ITGB4P16144 1822 aa21.02■□□□□ 0.96
XRCC3-210ENST00000554974 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
XRCC3-210ENST00000554974 MSH5O43196 834 aa21.02■□□□□ 0.96
XRCC3-210ENST00000554974 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
XRCC3-210ENST00000554974 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
XRCC3-210ENST00000554974 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
XRCC3-210ENST00000554974 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
XRCC3-210ENST00000554974 MSL1Q68DK7 614 aa21■□□□□ 0.95
XRCC3-210ENST00000554974 COL23A1Q86Y22 540 aaPredicted RBP21■□□□□ 0.95
XRCC3-210ENST00000554974 KIF24Q5T7B8 1368 aa20.99■□□□□ 0.95
XRCC3-210ENST00000554974 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
XRCC3-210ENST00000554974 CARD14Q9BXL6 1004 aa20.99■□□□□ 0.95
XRCC3-210ENST00000554974 EMILIN1Q9Y6C2 1016 aa20.99■□□□□ 0.95
XRCC3-210ENST00000554974 C4BP0C0L5 1744 aa20.98■□□□□ 0.95
XRCC3-210ENST00000554974 CYP27B1O15528 508 aa20.97■□□□□ 0.95
XRCC3-210ENST00000554974 CDCA8Q53HL2 280 aa20.97■□□□□ 0.95
XRCC3-210ENST00000554974 MPRIPQ6WCQ1 1025 aa20.97■□□□□ 0.95
XRCC3-210ENST00000554974 NCAPD2Q15021 1401 aa20.95■□□□□ 0.95
XRCC3-210ENST00000554974 PPM1GO15355 546 aaPredicted RBP20.94■□□□□ 0.94
XRCC3-210ENST00000554974 YBX3P16989 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
XRCC3-210ENST00000554974 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
XRCC3-210ENST00000554974 MAP2P11137 1827 aaKnown RBP20.93■□□□□ 0.94
XRCC3-210ENST00000554974 UBR3Q6ZT12 1888 aa20.93■□□□□ 0.94
XRCC3-210ENST00000554974 C1QTNF8P60827 252 aa20.92■□□□□ 0.94
XRCC3-210ENST00000554974 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
XRCC3-210ENST00000554974 AMIGO3Q86WK7 504 aa20.91■□□□□ 0.94
XRCC3-210ENST00000554974 SMIM5Q71RC9 77 aa20.89■□□□□ 0.93
XRCC3-210ENST00000554974 PIGBQ92521 554 aa20.89■□□□□ 0.93
XRCC3-210ENST00000554974 PHF14O94880 888 aa20.88■□□□□ 0.93
XRCC3-210ENST00000554974 AK7Q96M32 723 aa20.88■□□□□ 0.93
XRCC3-210ENST00000554974 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
XRCC3-210ENST00000554974 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
XRCC3-210ENST00000554974 GIGYF1O75420 1035 aaPredicted RBP20.86■□□□□ 0.93
XRCC3-210ENST00000554974 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
XRCC3-210ENST00000554974 EYA1Q99502 592 aa20.86■□□□□ 0.93
XRCC3-210ENST00000554974 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
XRCC3-210ENST00000554974 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
XRCC3-210ENST00000554974 NKX1-1Q15270 411 aaPredicted RBP20.85■□□□□ 0.93
XRCC3-210ENST00000554974 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
XRCC3-210ENST00000554974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
XRCC3-210ENST00000554974 LINC00116Q8NCU8 138 aa20.84■□□□□ 0.93
XRCC3-210ENST00000554974 CD2APQ9Y5K6 639 aa20.84■□□□□ 0.93
XRCC3-210ENST00000554974 TNNT2P45379 298 aaPredicted RBP20.83■□□□□ 0.93
XRCC3-210ENST00000554974 POLKQ9UBT6 870 aa20.83■□□□□ 0.93
XRCC3-210ENST00000554974 CEP350Q5VT06 3117 aa20.83■□□□□ 0.92
XRCC3-210ENST00000554974 LOC102724428A0A0B4J2F2 783 aa20.82■□□□□ 0.92
XRCC3-210ENST00000554974 SIK1P57059 783 aa20.82■□□□□ 0.92
XRCC3-210ENST00000554974 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
XRCC3-210ENST00000554974 ASAP1Q9ULH1 1129 aa20.82■□□□□ 0.92
XRCC3-210ENST00000554974 ATP10DQ9P241 1426 aa20.81■□□□□ 0.92
XRCC3-210ENST00000554974 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
XRCC3-210ENST00000554974 PHKG2P15735 406 aa20.8■□□□□ 0.92
XRCC3-210ENST00000554974 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
XRCC3-210ENST00000554974 ITPK1Q13572 414 aa20.8■□□□□ 0.92
XRCC3-210ENST00000554974 EIF4A2Q14240 407 aaKnown RBP20.8■□□□□ 0.92
XRCC3-210ENST00000554974 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
XRCC3-210ENST00000554974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
XRCC3-210ENST00000554974 GNPATO15228 680 aa20.78■□□□□ 0.92
XRCC3-210ENST00000554974 SSFA2P28290 1259 aa20.78■□□□□ 0.92
XRCC3-210ENST00000554974 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
XRCC3-210ENST00000554974 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms