RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 TFCP2L1Q9NZI6 479 aa11.52□□□□□ -0.57
ACTN1-212ENST00000554158 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.57
ACTN1-212ENST00000554158 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-212ENST00000554158 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
ACTN1-212ENST00000554158 MAP3K5Q99683 1374 aa11.51□□□□□ -0.57
ACTN1-212ENST00000554158 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
ACTN1-212ENST00000554158 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-212ENST00000554158 HMGB2P26583 209 aaKnown RBP11.5□□□□□ -0.57
ACTN1-212ENST00000554158 SBNO2Q9Y2G9 1366 aa11.5□□□□□ -0.57
ACTN1-212ENST00000554158 LY75O60449 1722 aa11.49□□□□□ -0.57
ACTN1-212ENST00000554158 AMPHP49418 695 aa11.49□□□□□ -0.57
ACTN1-212ENST00000554158 C1QTNF8P60827 252 aa11.49□□□□□ -0.57
ACTN1-212ENST00000554158 COG3Q96JB2 828 aa11.49□□□□□ -0.57
ACTN1-212ENST00000554158 SGIP1Q9BQI5 828 aa11.49□□□□□ -0.57
ACTN1-212ENST00000554158 ZNF827Q17R98 1081 aa11.48□□□□□ -0.57
ACTN1-212ENST00000554158 SLC12A5Q9H2X9 1139 aa11.48□□□□□ -0.57
ACTN1-212ENST00000554158 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
ACTN1-212ENST00000554158 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
ACTN1-212ENST00000554158 IP6K1Q92551 441 aa11.47□□□□□ -0.57
ACTN1-212ENST00000554158 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
ACTN1-212ENST00000554158 A0A1W2PP64 1363 aa11.46□□□□□ -0.57
ACTN1-212ENST00000554158 TONSLQ96HA7 1378 aa11.46□□□□□ -0.57
ACTN1-212ENST00000554158 USP47Q96K76 1375 aa11.46□□□□□ -0.57
ACTN1-212ENST00000554158 GRIN3BO60391 1043 aa11.46□□□□□ -0.57
ACTN1-212ENST00000554158 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
ACTN1-212ENST00000554158 AKT1S1Q96B36 256 aa11.46□□□□□ -0.57
ACTN1-212ENST00000554158 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-212ENST00000554158 UTRNP46939 3433 aa11.45□□□□□ -0.58
ACTN1-212ENST00000554158 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
ACTN1-212ENST00000554158 ANKRD36BQ8N2N9 1353 aa11.45□□□□□ -0.58
ACTN1-212ENST00000554158 ZCRB1Q8TBF4 217 aaKnown RBP11.45□□□□□ -0.58
ACTN1-212ENST00000554158 C5P01031 1676 aa11.45□□□□□ -0.58
ACTN1-212ENST00000554158 SHANK3Q9BYB0 1731 aa11.44□□□□□ -0.58
ACTN1-212ENST00000554158 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
ACTN1-212ENST00000554158 RAPGEF4Q8WZA2 1011 aa11.44□□□□□ -0.58
ACTN1-212ENST00000554158 TAF1LQ8IZX4 1826 aa11.44□□□□□ -0.58
ACTN1-212ENST00000554158 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
ACTN1-212ENST00000554158 KCNQ4P56696 695 aa11.43□□□□□ -0.58
ACTN1-212ENST00000554158 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
ACTN1-212ENST00000554158 CGNL1Q0VF96 1302 aa11.42□□□□□ -0.58
ACTN1-212ENST00000554158 HOXC9P31274 260 aa11.42□□□□□ -0.58
ACTN1-212ENST00000554158 ITGB4P16144 1822 aa11.42□□□□□ -0.58
ACTN1-212ENST00000554158 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
ACTN1-212ENST00000554158 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-212ENST00000554158 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
ACTN1-212ENST00000554158 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
ACTN1-212ENST00000554158 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
ACTN1-212ENST00000554158 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
ACTN1-212ENST00000554158 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
ACTN1-212ENST00000554158 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
ACTN1-212ENST00000554158 MEGF6O75095 1541 aa11.39□□□□□ -0.59
ACTN1-212ENST00000554158 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-212ENST00000554158 AK7Q96M32 723 aa11.38□□□□□ -0.59
ACTN1-212ENST00000554158 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-212ENST00000554158 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 ST20-MTHFSA0A0A6YYL1 179 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 TMF1P82094 1093 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 RRS1Q15050 365 aaKnown RBP11.37□□□□□ -0.59
ACTN1-212ENST00000554158 MPRIPQ6WCQ1 1025 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-212ENST00000554158 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 NSD2O96028 1365 aa11.37□□□□□ -0.59
ACTN1-212ENST00000554158 UBR3Q6ZT12 1888 aa11.36□□□□□ -0.59
ACTN1-212ENST00000554158 C4BP0C0L5 1744 aa11.36□□□□□ -0.59
ACTN1-212ENST00000554158 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■■■■□ 24.3
ACTN1-212ENST00000554158 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
ACTN1-212ENST00000554158 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
ACTN1-212ENST00000554158 MAP2P11137 1827 aaKnown RBP11.36□□□□□ -0.59
ACTN1-212ENST00000554158 PALLDQ8WX93 1383 aa11.36□□□□□ -0.59
ACTN1-212ENST00000554158 FBLN1P23142 703 aa11.35□□□□□ -0.59
ACTN1-212ENST00000554158 NBPF6Q5VWK0 638 aa11.35□□□□□ -0.59
ACTN1-212ENST00000554158 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-212ENST00000554158 NBPF4Q96M43 638 aa11.35□□□□□ -0.59
ACTN1-212ENST00000554158 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
ACTN1-212ENST00000554158 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
ACTN1-212ENST00000554158 FLT4P35916 1363 aa11.34□□□□□ -0.59
ACTN1-212ENST00000554158 PHF14O94880 888 aa11.34□□□□□ -0.59
ACTN1-212ENST00000554158 INSRP06213 1382 aa11.33□□□□□ -0.6
ACTN1-212ENST00000554158 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
ACTN1-212ENST00000554158 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-212ENST00000554158 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
ACTN1-212ENST00000554158 KIF24Q5T7B8 1368 aa11.32□□□□□ -0.6
ACTN1-212ENST00000554158 FYB1O15117 783 aa11.32□□□□□ -0.6
ACTN1-212ENST00000554158 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
ACTN1-212ENST00000554158 TESK2Q96S53 571 aa11.32□□□□□ -0.6
ACTN1-212ENST00000554158 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
ACTN1-212ENST00000554158 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
ACTN1-212ENST00000554158 TMOD3Q9NYL9 352 aa11.31□□□□□ -0.6
ACTN1-212ENST00000554158 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-212ENST00000554158 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
ACTN1-212ENST00000554158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
ACTN1-212ENST00000554158 WWC3Q9ULE0 1092 aa11.3□□□□□ -0.6
ACTN1-212ENST00000554158 HSPA6P17066 643 aa11.29□□□□□ -0.6
ACTN1-212ENST00000554158 SSFA2P28290 1259 aa11.29□□□□□ -0.6
ACTN1-212ENST00000554158 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-212ENST00000554158 LOC102724428A0A0B4J2F2 783 aa11.28□□□□□ -0.6
ACTN1-212ENST00000554158 GNPATO15228 680 aa11.28□□□□□ -0.6
ACTN1-212ENST00000554158 CYP27B1O15528 508 aa11.28□□□□□ -0.6
ACTN1-212ENST00000554158 ATP6V1AP38606 617 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms