RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 PKD1L3Q7Z443 1732 aa14.86□□□□□ -0.03
PNN-203ENST00000554117 FLT4P35916 1363 aa14.85□□□□□ -0.03
PNN-203ENST00000554117 NSD3Q9BZ95 1437 aa14.85□□□□□ -0.03
PNN-203ENST00000554117 FYB1O15117 783 aa14.85□□□□□ -0.03
PNN-203ENST00000554117 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
PNN-203ENST00000554117 RRS1Q15050 365 aaKnown RBP14.84□□□□□ -0.03
PNN-203ENST00000554117 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
PNN-203ENST00000554117 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
PNN-203ENST00000554117 EIF4G2P78344 907 aaKnown RBP eCLIP14.83□□□□□ -0.04
PNN-203ENST00000554117 SLC15A2Q16348 729 aa14.83□□□□□ -0.04
PNN-203ENST00000554117 SRCAPQ6ZRS2 3230 aa14.83□□□□□ -0.04
PNN-203ENST00000554117 INSRP06213 1382 aa14.82□□□□□ -0.04
PNN-203ENST00000554117 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
PNN-203ENST00000554117 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
PNN-203ENST00000554117 PTF1AQ7RTS3 328 aa14.8□□□□□ -0.04
PNN-203ENST00000554117 ANO8Q9HCE9 1232 aaPredicted RBP14.8□□□□□ -0.04
PNN-203ENST00000554117 PCDH11XQ9BZA7 1347 aa14.8□□□□□ -0.04
PNN-203ENST00000554117 PCDH11YQ9BZA8 1340 aa14.8□□□□□ -0.04
PNN-203ENST00000554117 MEGF6O75095 1541 aa14.79□□□□□ -0.04
PNN-203ENST00000554117 ZBTB7AO95365 584 aa14.79□□□□□ -0.04
PNN-203ENST00000554117 MTFR1LQ9H019 292 aa14.79□□□□□ -0.04
PNN-203ENST00000554117 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
PNN-203ENST00000554117 FBLN1P23142 703 aa14.78□□□□□ -0.04
PNN-203ENST00000554117 PROM2Q8N271 834 aa14.78□□□□□ -0.04
PNN-203ENST00000554117 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
PNN-203ENST00000554117 TOGARAM1Q9Y4F4 1720 aa14.77□□□□□ -0.05
PNN-203ENST00000554117 POLD1P28340 1107 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 PRIM1P49642 420 aaKnown RBP14.76□□□□□ -0.05
PNN-203ENST00000554117 HSP90AB2PQ58FF8 381 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 USHBP1Q8N6Y0 703 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
PNN-203ENST00000554117 SLC16A10Q8TF71 515 aa14.75□□□□□ -0.05
PNN-203ENST00000554117 TFCP2L1Q9NZI6 479 aa14.75□□□□□ -0.05
PNN-203ENST00000554117 NSD2O96028 1365 aa14.74□□□□□ -0.05
PNN-203ENST00000554117 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
PNN-203ENST00000554117 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
PNN-203ENST00000554117 MSH5O43196 834 aa14.73□□□□□ -0.05
PNN-203ENST00000554117 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
PNN-203ENST00000554117 C4BP0C0L5 1744 aa14.72□□□□□ -0.05
PNN-203ENST00000554117 YY1P25490 414 aa14.72□□□□□ -0.05
PNN-203ENST00000554117 CARD14Q9BXL6 1004 aa14.72□□□□□ -0.05
PNN-203ENST00000554117 WASHC2AQ641Q2 1341 aa14.71□□□□□ -0.05
PNN-203ENST00000554117 HSPA5P11021 654 aaKnown RBP14.71□□□□□ -0.05
PNN-203ENST00000554117 SMARCC1Q92922 1105 aaPredicted RBP14.71□□□□□ -0.05
PNN-203ENST00000554117 ARXQ96QS3 562 aa14.71□□□□□ -0.05
PNN-203ENST00000554117 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
PNN-203ENST00000554117 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
PNN-203ENST00000554117 MPRIPQ6WCQ1 1025 aa14.7□□□□□ -0.06
PNN-203ENST00000554117 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
PNN-203ENST00000554117 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
PNN-203ENST00000554117 PDGFDQ9GZP0 370 aaPredicted RBP14.69□□□□□ -0.06
PNN-203ENST00000554117 LRRC4BQ9NT99 713 aa14.69□□□□□ -0.06
PNN-203ENST00000554117 KNSTRNQ9Y448 316 aa14.69□□□□□ -0.06
PNN-203ENST00000554117 PTGER2P43116 358 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 ZNF827Q17R98 1081 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 MORC1Q86VD1 984 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 FHDC1Q9C0D6 1143 aaPredicted RBP14.68□□□□□ -0.06
PNN-203ENST00000554117 PANK3Q9H999 370 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 PLEKHG2Q9H7P9 1386 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
PNN-203ENST00000554117 IFNL2Q8IZJ0 200 aa14.67□□□□□ -0.06
PNN-203ENST00000554117 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
PNN-203ENST00000554117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.064e-23■■■□□ 17.6
PNN-203ENST00000554117 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
PNN-203ENST00000554117 HSP90AB1P08238 724 aaKnown RBP14.66□□□□□ -0.06
PNN-203ENST00000554117 SYT17Q9BSW7 474 aa14.66□□□□□ -0.06
PNN-203ENST00000554117 TMOD3Q9NYL9 352 aa14.66□□□□□ -0.06
PNN-203ENST00000554117 COL5A3P25940 1745 aaPredicted RBP14.66□□□□□ -0.06
PNN-203ENST00000554117 NCAPD2Q15021 1401 aa14.66□□□□□ -0.06
PNN-203ENST00000554117 AK7Q96M32 723 aa14.65□□□□□ -0.06
PNN-203ENST00000554117 POLKQ9UBT6 870 aa14.65□□□□□ -0.06
PNN-203ENST00000554117 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
PNN-203ENST00000554117 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
PNN-203ENST00000554117 EYA1Q99502 592 aa14.64□□□□□ -0.07
PNN-203ENST00000554117 CYP27B1O15528 508 aa14.63□□□□□ -0.07
PNN-203ENST00000554117 KCNQ4P56696 695 aa14.63□□□□□ -0.07
PNN-203ENST00000554117 GPR162Q16538 588 aa14.63□□□□□ -0.07
PNN-203ENST00000554117 PLEKHO1Q53GL0 409 aaPredicted RBP14.63□□□□□ -0.07
PNN-203ENST00000554117 EIF4A2Q14240 407 aaKnown RBP14.62□□□□□ -0.07
PNN-203ENST00000554117 AMOTQ4VCS5 1084 aa14.62□□□□□ -0.07
PNN-203ENST00000554117 C1orf141Q5JVX7 400 aa14.62□□□□□ -0.07
PNN-203ENST00000554117 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
PNN-203ENST00000554117 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
PNN-203ENST00000554117 PHKG2P15735 406 aa14.6□□□□□ -0.07
PNN-203ENST00000554117 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
PNN-203ENST00000554117 C4AP0C0L4 1744 aa14.59□□□□□ -0.07
PNN-203ENST00000554117 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
PNN-203ENST00000554117 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
PNN-203ENST00000554117 PIGBQ92521 554 aa14.58□□□□□ -0.08
PNN-203ENST00000554117 DCAF5Q96JK2 942 aa14.58□□□□□ -0.08
PNN-203ENST00000554117 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
PNN-203ENST00000554117 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
PNN-203ENST00000554117 SIK1P57059 783 aa14.57□□□□□ -0.08
PNN-203ENST00000554117 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
PNN-203ENST00000554117 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
PNN-203ENST00000554117 KIF13BQ9NQT8 1826 aa14.57□□□□□ -0.08
PNN-203ENST00000554117 PHF14O94880 888 aa14.56□□□□□ -0.08
PNN-203ENST00000554117 SSFA2P28290 1259 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms