RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
AL049839.2-201ENST00000553947 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
AL049839.2-201ENST00000553947 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
AL049839.2-201ENST00000553947 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
AL049839.2-201ENST00000553947 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
AL049839.2-201ENST00000553947 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
AL049839.2-201ENST00000553947 KRT24Q2M2I5 525 aa11.3□□□□□ -0.6
AL049839.2-201ENST00000553947 MCM10Q7L590 875 aa11.29□□□□□ -0.6
AL049839.2-201ENST00000553947 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
AL049839.2-201ENST00000553947 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
AL049839.2-201ENST00000553947 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 SMC5Q8IY18 1101 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 FOXO3O43524 673 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 PIK3C2AO00443 1686 aa11.28□□□□□ -0.6
AL049839.2-201ENST00000553947 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.6
AL049839.2-201ENST00000553947 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 ARHGAP45Q92619 1136 aa11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 PIK3R4Q99570 1358 aa11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 PDIA4P13667 645 aaKnown RBP11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 ZHX1Q9UKY1 873 aaPredicted RBP11.27□□□□□ -0.61
AL049839.2-201ENST00000553947 ABCC4O15439 1325 aa11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 CHL1O00533 1208 aa11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 MRE11P49959 708 aa11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 NLRP6P59044 892 aa11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
AL049839.2-201ENST00000553947 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 FLT4P35916 1363 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 FMN2Q9NZ56 1722 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 EYA1Q99502 592 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 ARHGEF10O15013 1369 aa11.25□□□□□ -0.61
AL049839.2-201ENST00000553947 AMPHP49418 695 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 CRB1P82279 1406 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 SIRT2Q8IXJ6 389 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 NUCB1Q02818 461 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
AL049839.2-201ENST00000553947 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
AL049839.2-201ENST00000553947 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
AL049839.2-201ENST00000553947 KDRP35968 1356 aa11.23□□□□□ -0.61
AL049839.2-201ENST00000553947 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 GRPEL1Q9HAV7 217 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 PRDM10Q9NQV6 1147 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 HOXC9P31274 260 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 ANKLE2Q86XL3 938 aa11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
AL049839.2-201ENST00000553947 RGS12O14924 1447 aa11.21□□□□□ -0.61
AL049839.2-201ENST00000553947 TRAK2O60296 914 aa11.21□□□□□ -0.62
AL049839.2-201ENST00000553947 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 LTV1Q96GA3 475 aaPredicted RBP11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 MCM4P33991 863 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 NWD1Q149M9 1564 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 MAP7D2Q96T17 732 aa11.2□□□□□ -0.62
AL049839.2-201ENST00000553947 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
AL049839.2-201ENST00000553947 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
AL049839.2-201ENST00000553947 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
AL049839.2-201ENST00000553947 UPF2Q9HAU5 1272 aaKnown RBP11.19□□□□□ -0.62
AL049839.2-201ENST00000553947 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
AL049839.2-201ENST00000553947 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 MSNP26038 577 aaKnown RBP11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 G2E3Q7L622 706 aa11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 GCC1Q96CN9 775 aa11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
AL049839.2-201ENST00000553947 R3HCC1Q9Y3T6 440 aaKnown RBP11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 ANP32BQ92688 251 aaKnown RBP11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
AL049839.2-201ENST00000553947 ESCO1Q5FWF5 840 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 NAP1L2Q9ULW6 460 aaPredicted RBP11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 MSH6P52701 1360 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 IL17REQ8NFR9 667 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 ADAMTSL3P82987 1691 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 ATP10DQ9P241 1426 aa11.16□□□□□ -0.62
AL049839.2-201ENST00000553947 F6X3S4 739 aa11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 MEIS3Q99687 375 aa11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
AL049839.2-201ENST00000553947 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms