RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 CT47A1Q5JQC4 288 aaPredicted RBP10.89□□□□□ -0.67
CCNK-203ENST00000553865 BICD2Q8TD16 824 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 TRAK2O60296 914 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 SAFBQ15424 915 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCNK-203ENST00000553865 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.89□□□□□ -0.676e-7■■■■■ 68.5
CCNK-203ENST00000553865 ABTB2Q8N961 1025 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 NKTRP30414 1462 aaKnown RBP10.89□□□□□ -0.67
CCNK-203ENST00000553865 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
CCNK-203ENST00000553865 INCENPQ9NQS7 918 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 SBNO2Q9Y2G9 1366 aa10.89□□□□□ -0.67
CCNK-203ENST00000553865 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 MBD3O95983 291 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
CCNK-203ENST00000553865 SULT6B1Q6IMI4 303 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 SURF6O75683 361 aaKnown RBP10.88□□□□□ -0.67
CCNK-203ENST00000553865 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 CAGE1Q8TC20 777 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 HMGN5P82970 282 aaKnown RBP10.88□□□□□ -0.67
CCNK-203ENST00000553865 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
CCNK-203ENST00000553865 CWC22Q9HCG8 908 aaKnown RBP10.88□□□□□ -0.67
CCNK-203ENST00000553865 LETM1O95202 739 aaPredicted RBP10.87□□□□□ -0.67
CCNK-203ENST00000553865 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
CCNK-203ENST00000553865 CCDC73Q6ZRK6 1079 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 ZFYVE9O95405 1425 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 DYDC1Q8WWB3 177 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 KIF1BO60333 1816 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
CCNK-203ENST00000553865 CDC42BPBQ9Y5S2 1711 aa10.87□□□□□ -0.67
CCNK-203ENST00000553865 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 NLRP2Q9NX02 1062 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 GLI2P10070 1586 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 DISP3Q9P2K9 1392 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 HSP90AB2PQ58FF8 381 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 ESCO1Q5FWF5 840 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 LMTK2Q8IWU2 1503 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 MSH5O43196 834 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 NASPP49321 788 aaPredicted RBP10.86□□□□□ -0.67
CCNK-203ENST00000553865 PIK3C2GO75747 1445 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 DHX16O60231 1041 aaKnown RBP10.86□□□□□ -0.67
CCNK-203ENST00000553865 CCP110O43303 1012 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 AIMP1Q12904 312 aaKnown RBP10.86□□□□□ -0.67
CCNK-203ENST00000553865 AXDND1Q5T1B0 1012 aaPredicted RBP10.86□□□□□ -0.67
CCNK-203ENST00000553865 TAF3Q5VWG9 929 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 SRCIN1Q9C0H9 1055 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
CCNK-203ENST00000553865 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 NEK4P51957 841 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 LRRCC1Q9C099 1032 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 DEF6Q9H4E7 631 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 ALDH1L2Q3SY69 923 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 NAT10Q9H0A0 1025 aaKnown RBP10.85□□□□□ -0.67
CCNK-203ENST00000553865 CIZ1Q9ULV3 898 aaPredicted RBP10.85□□□□□ -0.67
CCNK-203ENST00000553865 TBX22Q9Y458 520 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 NPATQ14207 1427 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 YTHDC2Q9H6S0 1430 aaKnown RBP10.85□□□□□ -0.67
CCNK-203ENST00000553865 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
CCNK-203ENST00000553865 RPAP2Q8IXW5 612 aaPredicted RBP10.85□□□□□ -0.67
CCNK-203ENST00000553865 FSD1Q9BTV5 496 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 NLRP1Q9C000 1473 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 HDGFL1Q5TGJ6 251 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 BRMS1Q9HCU9 246 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
CCNK-203ENST00000553865 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
CCNK-203ENST00000553865 XBP1P17861 261 aa10.84□□□□□ -0.67
CCNK-203ENST00000553865 PDCP20941 246 aa10.84□□□□□ -0.67
CCNK-203ENST00000553865 OFD1O75665 1012 aa10.84□□□□□ -0.67
CCNK-203ENST00000553865 SYTL4Q96C24 671 aaPredicted RBP10.84□□□□□ -0.67
CCNK-203ENST00000553865 RARSP54136 660 aaKnown RBP10.83□□□□□ -0.67
CCNK-203ENST00000553865 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.67
CCNK-203ENST00000553865 NEFHP12036 1026 aa10.83□□□□□ -0.68
CCNK-203ENST00000553865 CCDC43Q96MW1 224 aaKnown RBP10.83□□□□□ -0.68
CCNK-203ENST00000553865 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
CCNK-203ENST00000553865 PRDM15P57071 1507 aaPredicted RBP10.83□□□□□ -0.68
CCNK-203ENST00000553865 ABCC3O15438 1527 aa10.83□□□□□ -0.68
CCNK-203ENST00000553865 LRRIQ1Q96JM4 1722 aa10.83□□□□□ -0.68
CCNK-203ENST00000553865 RAD21O60216 631 aa10.83□□□□□ -0.68
CCNK-203ENST00000553865 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 POLR3AO14802 1390 aaPredicted RBP10.82□□□□□ -0.68
CCNK-203ENST00000553865 SPATA31E1Q6ZUB1 1445 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
CCNK-203ENST00000553865 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
CCNK-203ENST00000553865 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 TMEM57Q8N5G2 664 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 IL16Q14005 1332 aa10.82□□□□□ -0.68
CCNK-203ENST00000553865 GOLGA6L10A6NI86 522 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 ERLIN2O94905 339 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 ZC3H13Q5T200 1668 aaKnown RBP10.81□□□□□ -0.68
CCNK-203ENST00000553865 WASHC4Q2M389 1173 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 CAVIN1Q6NZI2 390 aaKnown RBP10.81□□□□□ -0.68
CCNK-203ENST00000553865 SART3Q15020 963 aaKnown RBP10.81□□□□□ -0.68
CCNK-203ENST00000553865 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
CCNK-203ENST00000553865 INO80Q9ULG1 1556 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms