RNA–Protein interactions for RNA: ENST00000553630.1

CALM1-206, Transcript of calmodulin 1, humanhuman

TSL 5

Gene CALM1, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-206ENST00000553630 PKD1L3Q7Z443 1732 aa23.6■■□□□ 1.37
CALM1-206ENST00000553630 MCM10Q7L590 875 aa23.59■■□□□ 1.37
CALM1-206ENST00000553630 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
CALM1-206ENST00000553630 NWD2Q9ULI1 1742 aa23.58■■□□□ 1.37
CALM1-206ENST00000553630 CRB1P82279 1406 aa23.58■■□□□ 1.36
CALM1-206ENST00000553630 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.36
CALM1-206ENST00000553630 IL16Q14005 1332 aa23.57■■□□□ 1.36
CALM1-206ENST00000553630 VIRMAQ69YN4 1812 aaKnown RBP23.57■■□□□ 1.36
CALM1-206ENST00000553630 TSR2Q969E8 191 aaKnown RBP23.57■■□□□ 1.36
CALM1-206ENST00000553630 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
CALM1-206ENST00000553630 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
CALM1-206ENST00000553630 ZNF530Q6P9A1 599 aaPredicted RBP23.56■■□□□ 1.36
CALM1-206ENST00000553630 CARD10Q9BWT7 1032 aa23.56■■□□□ 1.36
CALM1-206ENST00000553630 FANCIQ9NVI1 1328 aa23.56■■□□□ 1.36
CALM1-206ENST00000553630 SUPT16HQ9Y5B9 1047 aaKnown RBP23.55■■□□□ 1.36
CALM1-206ENST00000553630 WNK3Q9BYP7 1800 aa23.55■■□□□ 1.36
CALM1-206ENST00000553630 SLIT2O94813 1529 aa23.54■■□□□ 1.36
CALM1-206ENST00000553630 GNAT3A8MTJ3 354 aa23.54■■□□□ 1.36
CALM1-206ENST00000553630 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
CALM1-206ENST00000553630 LAS1LQ9Y4W2 734 aaKnown RBP23.54■■□□□ 1.36
CALM1-206ENST00000553630 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
CALM1-206ENST00000553630 OVOS2A0A0G2JMS6 1433 aa23.54■■□□□ 1.36
CALM1-206ENST00000553630 AMOTQ4VCS5 1084 aa23.53■■□□□ 1.36
CALM1-206ENST00000553630 RTF1Q92541 710 aaKnown RBP23.53■■□□□ 1.36
CALM1-206ENST00000553630 USP35Q9P2H5 1018 aa23.53■■□□□ 1.36
CALM1-206ENST00000553630 SHANK3Q9BYB0 1731 aa23.53■■□□□ 1.36
CALM1-206ENST00000553630 CALD1Q05682 793 aaKnown RBP23.52■■□□□ 1.36
CALM1-206ENST00000553630 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 HTATSF1O43719 755 aaKnown RBP23.5■■□□□ 1.35
CALM1-206ENST00000553630 ZNF853P0CG23 659 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 AKAP4Q5JQC9 854 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
CALM1-206ENST00000553630 ADAMTS7Q9UKP4 1686 aa23.49■■□□□ 1.35
CALM1-206ENST00000553630 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
CALM1-206ENST00000553630 PLEKHG2Q9H7P9 1386 aa23.48■■□□□ 1.35
CALM1-206ENST00000553630 IL2RBP14784 551 aa23.48■■□□□ 1.35
CALM1-206ENST00000553630 GNAI1P63096 354 aa23.48■■□□□ 1.35
CALM1-206ENST00000553630 SPG7Q9UQ90 795 aa23.48■■□□□ 1.35
CALM1-206ENST00000553630 CFAP44Q96MT7 982 aa23.47■■□□□ 1.35
CALM1-206ENST00000553630 MBIPQ9NS73 344 aa23.47■■□□□ 1.35
CALM1-206ENST00000553630 GTF3C3Q9Y5Q9 886 aa23.47■■□□□ 1.35
CALM1-206ENST00000553630 DISP2A7MBM2 1401 aa23.46■■□□□ 1.35
CALM1-206ENST00000553630 EXOSC9Q06265 439 aaKnown RBP23.46■■□□□ 1.35
CALM1-206ENST00000553630 MPRIPQ6WCQ1 1025 aa23.46■■□□□ 1.35
CALM1-206ENST00000553630 NGLY1Q96IV0 654 aa23.46■■□□□ 1.35
CALM1-206ENST00000553630 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
CALM1-206ENST00000553630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.46■■□□□ 1.358e-7■■□□□ 14.3
CALM1-206ENST00000553630 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
CALM1-206ENST00000553630 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.35
CALM1-206ENST00000553630 BCL9LQ86UU0 1499 aa23.45■■□□□ 1.34
CALM1-206ENST00000553630 PHKG2P15735 406 aa23.44■■□□□ 1.34
CALM1-206ENST00000553630 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
CALM1-206ENST00000553630 SIPA1L3O60292 1781 aaPredicted RBP23.44■■□□□ 1.34
CALM1-206ENST00000553630 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.44■■□□□ 1.34
CALM1-206ENST00000553630 CYP27B1O15528 508 aa23.43■■□□□ 1.34
CALM1-206ENST00000553630 MIS18AQ9NYP9 233 aa23.43■■□□□ 1.34
CALM1-206ENST00000553630 SPATA31A1Q5TZJ5 1347 aa23.43■■□□□ 1.34
CALM1-206ENST00000553630 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
CALM1-206ENST00000553630 CHL1O00533 1208 aa23.42■■□□□ 1.34
CALM1-206ENST00000553630 RNMTO43148 476 aaKnown RBP23.42■■□□□ 1.34
CALM1-206ENST00000553630 IRX6P78412 446 aaPredicted RBP23.42■■□□□ 1.34
CALM1-206ENST00000553630 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
CALM1-206ENST00000553630 ZCRB1Q8TBF4 217 aaKnown RBP23.42■■□□□ 1.34
CALM1-206ENST00000553630 SPATA31A5Q5VU36 1347 aa23.41■■□□□ 1.34
CALM1-206ENST00000553630 RNF123Q5XPI4 1314 aa23.41■■□□□ 1.34
CALM1-206ENST00000553630 SPATA31A7Q8IWB4 1347 aa23.41■■□□□ 1.34
CALM1-206ENST00000553630 KDM3BQ7LBC6 1761 aa23.41■■□□□ 1.34
CALM1-206ENST00000553630 IFNL2Q8IZJ0 200 aa23.41■■□□□ 1.34
CALM1-206ENST00000553630 PCDH11XQ9BZA7 1347 aa23.4■■□□□ 1.34
CALM1-206ENST00000553630 PCDH11YQ9BZA8 1340 aa23.4■■□□□ 1.34
CALM1-206ENST00000553630 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
CALM1-206ENST00000553630 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
CALM1-206ENST00000553630 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
CALM1-206ENST00000553630 RRP1P56182 461 aaKnown RBP23.38■■□□□ 1.33
CALM1-206ENST00000553630 TOGARAM1Q9Y4F4 1720 aa23.37■■□□□ 1.33
CALM1-206ENST00000553630 USP21Q9UK80 565 aa23.37■■□□□ 1.33
CALM1-206ENST00000553630 BCAR3O75815 825 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 NEFLP07196 543 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 TEFQ10587 303 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 TAF7Q15545 349 aaPredicted RBP23.36■■□□□ 1.33
CALM1-206ENST00000553630 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 C8orf58Q8NAV2 365 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 DDX54Q8TDD1 881 aaKnown RBP23.36■■□□□ 1.33
CALM1-206ENST00000553630 MRC1P22897 1456 aa23.36■■□□□ 1.33
CALM1-206ENST00000553630 FKBP8Q14318 412 aa23.35■■□□□ 1.33
CALM1-206ENST00000553630 AFF2P51816 1311 aa23.35■■□□□ 1.33
CALM1-206ENST00000553630 TNS2Q63HR2 1409 aa23.34■■□□□ 1.33
CALM1-206ENST00000553630 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
CALM1-206ENST00000553630 PLIN1O60240 522 aa23.34■■□□□ 1.33
CALM1-206ENST00000553630 RARSP54136 660 aaKnown RBP23.34■■□□□ 1.33
CALM1-206ENST00000553630 VPS72Q15906 364 aa23.34■■□□□ 1.33
CALM1-206ENST00000553630 DCAF5Q96JK2 942 aa23.33■■□□□ 1.33
CALM1-206ENST00000553630 BCL2L13Q9BXK5 485 aa23.33■■□□□ 1.33
CALM1-206ENST00000553630 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.33
CALM1-206ENST00000553630 CT47B1P0C2W7 299 aaPredicted RBP23.33■■□□□ 1.32
CALM1-206ENST00000553630 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
CALM1-206ENST00000553630 GLI3P10071 1580 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms