RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
HNRNPC-206ENST00000553444 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
HNRNPC-206ENST00000553444 SHANK3Q9BYB0 1731 aa16.64■□□□□ 0.25
HNRNPC-206ENST00000553444 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
HNRNPC-206ENST00000553444 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
HNRNPC-206ENST00000553444 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
HNRNPC-206ENST00000553444 MSH5O43196 834 aa16.62■□□□□ 0.25
HNRNPC-206ENST00000553444 HOXC9P31274 260 aa16.62■□□□□ 0.25
HNRNPC-206ENST00000553444 CARD11Q9BXL7 1154 aa16.62■□□□□ 0.25
HNRNPC-206ENST00000553444 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
HNRNPC-206ENST00000553444 MEGF6O75095 1541 aa16.61■□□□□ 0.25
HNRNPC-206ENST00000553444 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
HNRNPC-206ENST00000553444 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
HNRNPC-206ENST00000553444 QSER1Q2KHR3 1735 aa16.61■□□□□ 0.25
HNRNPC-206ENST00000553444 USP47Q96K76 1375 aa16.6■□□□□ 0.25
HNRNPC-206ENST00000553444 AMPHP49418 695 aa16.59■□□□□ 0.25
HNRNPC-206ENST00000553444 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
HNRNPC-206ENST00000553444 FBLN1P23142 703 aa16.58■□□□□ 0.24
HNRNPC-206ENST00000553444 COG3Q96JB2 828 aa16.58■□□□□ 0.24
HNRNPC-206ENST00000553444 LTN1O94822 1766 aa16.57■□□□□ 0.24
HNRNPC-206ENST00000553444 ADCY9O60503 1353 aa16.57■□□□□ 0.24
HNRNPC-206ENST00000553444 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
HNRNPC-206ENST00000553444 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
HNRNPC-206ENST00000553444 GPBP1L1Q9HC44 474 aaPredicted RBP16.56■□□□□ 0.24
HNRNPC-206ENST00000553444 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
HNRNPC-206ENST00000553444 CGNL1Q0VF96 1302 aa16.55■□□□□ 0.24
HNRNPC-206ENST00000553444 FLAD1Q8NFF5 587 aa16.55■□□□□ 0.24
HNRNPC-206ENST00000553444 FAM208AQ9UK61 1670 aaKnown RBP16.55■□□□□ 0.24
HNRNPC-206ENST00000553444 HSPA6P17066 643 aa16.54■□□□□ 0.24
HNRNPC-206ENST00000553444 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
HNRNPC-206ENST00000553444 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
HNRNPC-206ENST00000553444 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
HNRNPC-206ENST00000553444 PALLDQ8WX93 1383 aa16.53■□□□□ 0.24
HNRNPC-206ENST00000553444 RAPGEF4Q8WZA2 1011 aa16.53■□□□□ 0.24
HNRNPC-206ENST00000553444 LY75O60449 1722 aa16.53■□□□□ 0.24
HNRNPC-206ENST00000553444 HMGB2P26583 209 aaKnown RBP16.52■□□□□ 0.24
HNRNPC-206ENST00000553444 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
HNRNPC-206ENST00000553444 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
HNRNPC-206ENST00000553444 TESK2Q96S53 571 aa16.52■□□□□ 0.24
HNRNPC-206ENST00000553444 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.23
HNRNPC-206ENST00000553444 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
HNRNPC-206ENST00000553444 AMIGO3Q86WK7 504 aa16.51■□□□□ 0.23
HNRNPC-206ENST00000553444 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
HNRNPC-206ENST00000553444 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
HNRNPC-206ENST00000553444 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
HNRNPC-206ENST00000553444 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
HNRNPC-206ENST00000553444 AK7Q96M32 723 aa16.49■□□□□ 0.23
HNRNPC-206ENST00000553444 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
HNRNPC-206ENST00000553444 CYP27B1O15528 508 aa16.48■□□□□ 0.23
HNRNPC-206ENST00000553444 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 KIF3CO14782 793 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 FYB1O15117 783 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 SMARCC1Q92922 1105 aaPredicted RBP16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
HNRNPC-206ENST00000553444 PHF14O94880 888 aa16.46■□□□□ 0.23
HNRNPC-206ENST00000553444 SMIM5Q71RC9 77 aa16.46■□□□□ 0.23
HNRNPC-206ENST00000553444 INSRP06213 1382 aa16.46■□□□□ 0.23
HNRNPC-206ENST00000553444 PIGBQ92521 554 aa16.45■□□□□ 0.22
HNRNPC-206ENST00000553444 SSFA2P28290 1259 aa16.44■□□□□ 0.22
HNRNPC-206ENST00000553444 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
HNRNPC-206ENST00000553444 FLT4P35916 1363 aa16.43■□□□□ 0.22
HNRNPC-206ENST00000553444 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
HNRNPC-206ENST00000553444 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 SIK1P57059 783 aa16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 NKX1-1Q15270 411 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
HNRNPC-206ENST00000553444 C5P01031 1676 aa16.41■□□□□ 0.22
HNRNPC-206ENST00000553444 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
HNRNPC-206ENST00000553444 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
HNRNPC-206ENST00000553444 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 GNPATO15228 680 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 MMP10P09238 476 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 APLP1P51693 650 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 ITPK1Q13572 414 aa16.38■□□□□ 0.21
HNRNPC-206ENST00000553444 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
HNRNPC-206ENST00000553444 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
HNRNPC-206ENST00000553444 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
HNRNPC-206ENST00000553444 TMF1P82094 1093 aa16.36■□□□□ 0.21
HNRNPC-206ENST00000553444 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
HNRNPC-206ENST00000553444 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
HNRNPC-206ENST00000553444 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
HNRNPC-206ENST00000553444 TOMM70O94826 608 aa16.35■□□□□ 0.21
HNRNPC-206ENST00000553444 DNAJC5GQ8N7S2 189 aa16.35■□□□□ 0.21
HNRNPC-206ENST00000553444 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
HNRNPC-206ENST00000553444 TGFB2P61812 414 aa16.34■□□□□ 0.21
HNRNPC-206ENST00000553444 ATG3Q9NT62 314 aa16.34■□□□□ 0.21
HNRNPC-206ENST00000553444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.214e-12■■■□□ 16.9
HNRNPC-206ENST00000553444 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
HNRNPC-206ENST00000553444 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
HNRNPC-206ENST00000553444 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
HNRNPC-206ENST00000553444 TAF1LQ8IZX4 1826 aa16.33■□□□□ 0.2
HNRNPC-206ENST00000553444 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
HNRNPC-206ENST00000553444 PHKG2P15735 406 aa16.32■□□□□ 0.2
HNRNPC-206ENST00000553444 EYA1Q99502 592 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms