RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 MEGF6O75095 1541 aa21.12■□□□□ 0.97
APEX1-204ENST00000553368 UTRNP46939 3433 aa21.11■□□□□ 0.97
APEX1-204ENST00000553368 TMF1P82094 1093 aa21.11■□□□□ 0.97
APEX1-204ENST00000553368 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
APEX1-204ENST00000553368 DOT1LQ8TEK3 1739 aa21.1■□□□□ 0.97
APEX1-204ENST00000553368 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
APEX1-204ENST00000553368 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
APEX1-204ENST00000553368 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
APEX1-204ENST00000553368 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
APEX1-204ENST00000553368 LY75O60449 1722 aa21.09■□□□□ 0.97
APEX1-204ENST00000553368 PNPLA7Q6ZV29 1317 aa21.09■□□□□ 0.97
APEX1-204ENST00000553368 USP47Q96K76 1375 aa21.09■□□□□ 0.97
APEX1-204ENST00000553368 CGNL1Q0VF96 1302 aa21.08■□□□□ 0.97
APEX1-204ENST00000553368 SYTL4Q96C24 671 aaPredicted RBP21.08■□□□□ 0.97
APEX1-204ENST00000553368 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
APEX1-204ENST00000553368 KCNQ4P56696 695 aa21.06■□□□□ 0.96
APEX1-204ENST00000553368 INSRP06213 1382 aa21.05■□□□□ 0.96
APEX1-204ENST00000553368 CHD4Q14839 1912 aa21.04■□□□□ 0.96
APEX1-204ENST00000553368 USHBP1Q8N6Y0 703 aa21.04■□□□□ 0.96
APEX1-204ENST00000553368 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
APEX1-204ENST00000553368 TFCP2L1Q9NZI6 479 aa21.04■□□□□ 0.96
APEX1-204ENST00000553368 KIF24Q5T7B8 1368 aa21.04■□□□□ 0.96
APEX1-204ENST00000553368 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
APEX1-204ENST00000553368 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
APEX1-204ENST00000553368 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
APEX1-204ENST00000553368 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
APEX1-204ENST00000553368 KIF20BQ96Q89 1820 aa21.02■□□□□ 0.96
APEX1-204ENST00000553368 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
APEX1-204ENST00000553368 POLD1P28340 1107 aa21.02■□□□□ 0.96
APEX1-204ENST00000553368 CCNL1Q9UK58 526 aaPredicted RBP21.02■□□□□ 0.96
APEX1-204ENST00000553368 FLT4P35916 1363 aa21.01■□□□□ 0.95
APEX1-204ENST00000553368 CARD14Q9BXL6 1004 aa21.01■□□□□ 0.95
APEX1-204ENST00000553368 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
APEX1-204ENST00000553368 PCDH11XQ9BZA7 1347 aa20.98■□□□□ 0.95
APEX1-204ENST00000553368 PCDH11YQ9BZA8 1340 aa20.98■□□□□ 0.95
APEX1-204ENST00000553368 COL23A1Q86Y22 540 aaPredicted RBP20.97■□□□□ 0.95
APEX1-204ENST00000553368 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
APEX1-204ENST00000553368 CYP27B1O15528 508 aa20.96■□□□□ 0.95
APEX1-204ENST00000553368 GPR162Q16538 588 aa20.96■□□□□ 0.95
APEX1-204ENST00000553368 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
APEX1-204ENST00000553368 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
APEX1-204ENST00000553368 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
APEX1-204ENST00000553368 HMGB2P26583 209 aaKnown RBP20.93■□□□□ 0.94
APEX1-204ENST00000553368 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
APEX1-204ENST00000553368 NLGN2Q8NFZ4 835 aa20.93■□□□□ 0.94
APEX1-204ENST00000553368 C5P01031 1676 aa20.93■□□□□ 0.94
APEX1-204ENST00000553368 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
APEX1-204ENST00000553368 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
APEX1-204ENST00000553368 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
APEX1-204ENST00000553368 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
APEX1-204ENST00000553368 NKX1-1Q15270 411 aaPredicted RBP20.91■□□□□ 0.94
APEX1-204ENST00000553368 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
APEX1-204ENST00000553368 MPRIPQ6WCQ1 1025 aa20.91■□□□□ 0.94
APEX1-204ENST00000553368 ANKRD26Q9UPS8 1709 aa20.91■□□□□ 0.94
APEX1-204ENST00000553368 ITGB4P16144 1822 aa20.9■□□□□ 0.94
APEX1-204ENST00000553368 MSH5O43196 834 aa20.9■□□□□ 0.94
APEX1-204ENST00000553368 FLAD1Q8NFF5 587 aa20.9■□□□□ 0.94
APEX1-204ENST00000553368 SMARCC1Q92922 1105 aaPredicted RBP20.89■□□□□ 0.93
APEX1-204ENST00000553368 PIGBQ92521 554 aa20.88■□□□□ 0.93
APEX1-204ENST00000553368 EYA1Q99502 592 aa20.87■□□□□ 0.93
APEX1-204ENST00000553368 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.931e-7■□□□□ 8.8
APEX1-204ENST00000553368 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
APEX1-204ENST00000553368 GOLGB1Q14789 3259 aaKnown RBP20.87■□□□□ 0.93
APEX1-204ENST00000553368 C1QTNF8P60827 252 aa20.86■□□□□ 0.93
APEX1-204ENST00000553368 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
APEX1-204ENST00000553368 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
APEX1-204ENST00000553368 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
APEX1-204ENST00000553368 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
APEX1-204ENST00000553368 C4BP0C0L5 1744 aa20.86■□□□□ 0.93
APEX1-204ENST00000553368 PPM1GO15355 546 aaPredicted RBP20.85■□□□□ 0.93
APEX1-204ENST00000553368 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
APEX1-204ENST00000553368 YBX3P16989 372 aaKnown RBP eCLIP20.85■□□□□ 0.93
APEX1-204ENST00000553368 CD2APQ9Y5K6 639 aa20.84■□□□□ 0.93
APEX1-204ENST00000553368 CLSPNQ9HAW4 1339 aa20.83■□□□□ 0.93
APEX1-204ENST00000553368 AMIGO3Q86WK7 504 aa20.83■□□□□ 0.93
APEX1-204ENST00000553368 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
APEX1-204ENST00000553368 AK7Q96M32 723 aa20.82■□□□□ 0.92
APEX1-204ENST00000553368 LOC102724428A0A0B4J2F2 783 aa20.8■□□□□ 0.92
APEX1-204ENST00000553368 PHKG2P15735 406 aa20.8■□□□□ 0.92
APEX1-204ENST00000553368 SIK1P57059 783 aa20.8■□□□□ 0.92
APEX1-204ENST00000553368 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
APEX1-204ENST00000553368 PLEKHG2Q9H7P9 1386 aa20.8■□□□□ 0.92
APEX1-204ENST00000553368 SSFA2P28290 1259 aa20.79■□□□□ 0.92
APEX1-204ENST00000553368 EIF4A2Q14240 407 aaKnown RBP20.79■□□□□ 0.92
APEX1-204ENST00000553368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.78■□□□□ 0.92
APEX1-204ENST00000553368 SMIM5Q71RC9 77 aa20.78■□□□□ 0.92
APEX1-204ENST00000553368 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
APEX1-204ENST00000553368 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
APEX1-204ENST00000553368 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
APEX1-204ENST00000553368 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
APEX1-204ENST00000553368 GIGYF1O75420 1035 aaPredicted RBP20.76■□□□□ 0.91
APEX1-204ENST00000553368 PHF14O94880 888 aa20.76■□□□□ 0.91
APEX1-204ENST00000553368 ITPK1Q13572 414 aa20.76■□□□□ 0.91
APEX1-204ENST00000553368 ATG3Q9NT62 314 aa20.75■□□□□ 0.91
APEX1-204ENST00000553368 IGSF1Q8N6C5 1336 aa20.75■□□□□ 0.91
APEX1-204ENST00000553368 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
APEX1-204ENST00000553368 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
APEX1-204ENST00000553368 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
APEX1-204ENST00000553368 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
APEX1-204ENST00000553368 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms