RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 ASTLQ6HA08 431 aaPredicted RBP8.72□□□□□ -1.01
CCDC59-206ENST00000552412 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
CCDC59-206ENST00000552412 ARHGAP45Q92619 1136 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 SMC4Q9NTJ3 1288 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 DDX19BQ9UMR2 479 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 TRPC6Q9Y210 931 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 KDRP35968 1356 aa8.72□□□□□ -1.01
CCDC59-206ENST00000552412 MARF1Q9Y4F3 1742 aaKnown RBP8.71□□□□□ -1.01
CCDC59-206ENST00000552412 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
CCDC59-206ENST00000552412 GSE1Q14687 1217 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 ATF7IPQ6VMQ6 1270 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
CCDC59-206ENST00000552412 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.02
CCDC59-206ENST00000552412 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 FRAT1Q92837 279 aaPredicted RBP8.71□□□□□ -1.02
CCDC59-206ENST00000552412 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 COG6Q9Y2V7 657 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 PHRF1Q9P1Y6 1649 aaKnown RBP8.71□□□□□ -1.02
CCDC59-206ENST00000552412 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
CCDC59-206ENST00000552412 KCNA6P17658 529 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 ATN1P54259 1190 aaPredicted RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 RRS1Q15050 365 aaKnown RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 SSH1Q8WYL5 1049 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 IPO9Q96P70 1041 aaKnown RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
CCDC59-206ENST00000552412 RWDD1Q9H446 243 aaPredicted RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 BMP2KQ9NSY1 1161 aaPredicted RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 NPHP4O75161 1426 aaPredicted RBP8.7□□□□□ -1.02
CCDC59-206ENST00000552412 HMOX1P09601 288 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 RLBP1P12271 317 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 TRIM27P14373 513 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
CCDC59-206ENST00000552412 SLC39A7Q92504 469 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 PHACTR3Q96KR7 559 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 CIZ1Q9ULV3 898 aaPredicted RBP8.69□□□□□ -1.02
CCDC59-206ENST00000552412 KIAA0232Q92628 1395 aa8.69□□□□□ -1.02
CCDC59-206ENST00000552412 HTATSF1O43719 755 aaKnown RBP8.68□□□□□ -1.02
CCDC59-206ENST00000552412 TIE1P35590 1138 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 IFNL1Q8IU54 200 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 DDRGK1Q96HY6 314 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
CCDC59-206ENST00000552412 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 LRRC37A3O60309 1634 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 KIF1AQ12756 1690 aa8.68□□□□□ -1.02
CCDC59-206ENST00000552412 CACNA1FO60840 1977 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 C7P10643 843 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 FBLN1P23142 703 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 MST1RQ04912 1400 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 SOS1Q07889 1333 aaPredicted RBP8.67□□□□□ -1.02
CCDC59-206ENST00000552412 SULT6B1Q6IMI4 303 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 NCOA3Q9Y6Q9 1424 aa8.67□□□□□ -1.02
CCDC59-206ENST00000552412 VAMP4O75379 141 aa8.66□□□□□ -1.02
CCDC59-206ENST00000552412 IGHDP01880 384 aa8.66□□□□□ -1.02
CCDC59-206ENST00000552412 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
CCDC59-206ENST00000552412 API5Q9BZZ5 524 aaKnown RBP8.66□□□□□ -1.02
CCDC59-206ENST00000552412 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
CCDC59-206ENST00000552412 BABAM1Q9NWV8 329 aa8.66□□□□□ -1.02
CCDC59-206ENST00000552412 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
CCDC59-206ENST00000552412 PHF8Q9UPP1 1060 aa8.66□□□□□ -1.02
CCDC59-206ENST00000552412 NFAT5O94916 1531 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 DCCP43146 1447 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 ABCC4O15439 1325 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 CHL1O00533 1208 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 AMPHP49418 695 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 NLRP6P59044 892 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 TWISTNBQ3B726 338 aaPredicted RBP8.65□□□□□ -1.02
CCDC59-206ENST00000552412 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 LTN1O94822 1766 aa8.65□□□□□ -1.02
CCDC59-206ENST00000552412 SLIT3O75094 1523 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 LMTK3Q96Q04 1460 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 CRB1P82279 1406 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 TTLL13PA6NNM8 815 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
CCDC59-206ENST00000552412 PLEKHG2Q9H7P9 1386 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 PTPRCP08575 1304 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 HOXC9P31274 260 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 TMEM57Q8N5G2 664 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
CCDC59-206ENST00000552412 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 TRPM3Q9HCF6 1732 aaPredicted RBP8.63□□□□□ -1.03
CCDC59-206ENST00000552412 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
CCDC59-206ENST00000552412 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
CCDC59-206ENST00000552412 RGS3P49796 1198 aa8.62□□□□□ -1.03
CCDC59-206ENST00000552412 ABTB2Q8N961 1025 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms