RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LMOD1P29536 600 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 MMP16P51512 607 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 MCCD1P59942 119 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 NBPF14Q5TI25 921 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 CCDC24Q8N4L8 307 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 FAM160A2Q8N612 972 aaPredicted RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 PBXIP1Q96AQ6 731 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 IL21Q9HBE4 155 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 PODXL2Q9NZ53 605 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 MAP10Q9P2G4 905 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 TCOF1Q13428 1488 aaKnown RBP3.96□□□□□ -1.78
CPSF6-207ENST00000551516 CTTNBP2Q8WZ74 1663 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 SRCAPQ6ZRS2 3230 aa3.96□□□□□ -1.78
CPSF6-207ENST00000551516 TROQ12816 1431 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-207ENST00000551516 EEA1Q15075 1411 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 DIP2CQ9Y2E4 1556 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 IQSEC2Q5JU85 1478 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 MBD5Q9P267 1494 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 FBXO45P0C2W1 286 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 CSB-PGBD3P0DP91 1061 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 TRIM26Q12899 539 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-207ENST00000551516 PDXDC2PQ6P474 469 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 MTRQ99707 1265 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 TRAIPQ9BWF2 469 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 SLC6A16Q9GZN6 736 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 TFIP11Q9UBB9 837 aaKnown RBP3.95□□□□□ -1.78
CPSF6-207ENST00000551516 GPSM3Q9Y4H4 160 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 PTPRKQ15262 1439 aa3.95□□□□□ -1.78
CPSF6-207ENST00000551516 FER1L4A9Z1Z3 1794 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-207ENST00000551516 CFAP70Q5T0N1 1121 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 EFCAB2Q5VUJ9 269 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 CDAN1Q8IWY9 1227 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 KCTD17Q8N5Z5 321 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 RETREG2Q8NC44 543 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 PRDM9Q9NQV7 894 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 RGS17Q9UGC6 210 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-207ENST00000551516 EFCAB5A4FU69 1503 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 NPATQ14207 1427 aa3.94□□□□□ -1.78
CPSF6-207ENST00000551516 ZNF518AQ6AHZ1 1483 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 ZMYM3Q14202 1370 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 KIF14Q15058 1648 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 ATP9BO43861 1147 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 TLL1O43897 1013 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 ZBTB33Q86T24 672 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 AEBP1Q8IUX7 1158 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 UCN2Q96RP3 112 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 ARHGAP9Q9BRR9 750 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 UNC93B1Q9H1C4 597 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 VRTNQ9H8Y1 702 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 MYT1LQ9UL68 1186 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 GPATCH8Q9UKJ3 1502 aaKnown RBP3.93□□□□□ -1.78
CPSF6-207ENST00000551516 KIAA1107Q9UPP5 1409 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 RIMS1Q86UR5 1692 aaKnown RBP3.93□□□□□ -1.78
CPSF6-207ENST00000551516 PLXNC1O60486 1568 aa3.93□□□□□ -1.78
CPSF6-207ENST00000551516 ZNF335Q9H4Z2 1342 aaPredicted RBP3.93□□□□□ -1.78
CPSF6-207ENST00000551516 PLA2R1Q13018 1463 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 ABCC1P33527 1531 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 SKIP12755 728 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 MLECQ14165 292 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 AGERQ15109 404 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 SLFNL1Q499Z3 407 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 CDCA8Q53HL2 280 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 TJAP1Q5JTD0 557 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 TBC1D9Q6ZT07 1266 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 DZIP3Q86Y13 1208 aaKnown RBP3.92□□□□□ -1.78
CPSF6-207ENST00000551516 ZNF516Q92618 1163 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 USTQ9Y2C2 406 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 PCDHB9Q9Y5E1 797 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 MAFBQ9Y5Q3 323 aaPredicted RBP3.92□□□□□ -1.78
CPSF6-207ENST00000551516 ARID4BQ4LE39 1312 aaPredicted RBP3.92□□□□□ -1.78
CPSF6-207ENST00000551516 ABCA6Q8N139 1617 aa3.92□□□□□ -1.78
CPSF6-207ENST00000551516 ZBTB24O43167 697 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 LZTS3O60299 673 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 ATG7O95352 703 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 SRPK2P78362 688 aaKnown RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 FMN1Q68DA7 1419 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 BPHLQ86WA6 291 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 NFATC2IPQ8NCF5 419 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 ADAM32Q8TC27 787 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 CASKIN1Q8WXD9 1431 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 PCDH10Q9P2E7 1040 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 CEP126Q9P2H0 1117 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 KIDINS220Q9ULH0 1771 aa3.91□□□□□ -1.78
CPSF6-207ENST00000551516 ZNF644Q9H582 1327 aaPredicted RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 SETD1BQ9UPS6 1966 aaKnown RBP3.91□□□□□ -1.78
CPSF6-207ENST00000551516 SAMD9LQ8IVG5 1584 aa3.9□□□□□ -1.78
CPSF6-207ENST00000551516 UHRF1BP1Q6BDS2 1440 aa3.9□□□□□ -1.78
CPSF6-207ENST00000551516 MAGEB6P1A0A0J9YX57 407 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 PATL2C9JE40 543 aaKnown RBP3.9□□□□□ -1.79
CPSF6-207ENST00000551516 S1PR4O95977 384 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 PTCRAQ6ISU1 281 aaPredicted RBP3.9□□□□□ -1.79
CPSF6-207ENST00000551516 RNF135Q8IUD6 432 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 BAP1Q92560 729 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 FCF1Q9Y324 198 aaKnown RBP3.9□□□□□ -1.79
CPSF6-207ENST00000551516 MED14O60244 1454 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 LRRIQ1Q96JM4 1722 aa3.9□□□□□ -1.79
CPSF6-207ENST00000551516 DISP3Q9P2K9 1392 aa3.89□□□□□ -1.79
CPSF6-207ENST00000551516 NEURL4Q96JN8 1562 aa3.89□□□□□ -1.79
CPSF6-207ENST00000551516 CNTLNQ9NXG0 1405 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms