RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
TROAP-212ENST00000550346 GLI3P10071 1580 aa17.36■□□□□ 0.37
TROAP-212ENST00000550346 FCHSD2O94868 740 aa17.35■□□□□ 0.37
TROAP-212ENST00000550346 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
TROAP-212ENST00000550346 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
TROAP-212ENST00000550346 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
TROAP-212ENST00000550346 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
TROAP-212ENST00000550346 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
TROAP-212ENST00000550346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
TROAP-212ENST00000550346 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
TROAP-212ENST00000550346 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
TROAP-212ENST00000550346 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
TROAP-212ENST00000550346 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
TROAP-212ENST00000550346 RGS12O14924 1447 aa17.3■□□□□ 0.36
TROAP-212ENST00000550346 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
TROAP-212ENST00000550346 DISP2A7MBM2 1401 aa17.29■□□□□ 0.36
TROAP-212ENST00000550346 KDRP35968 1356 aa17.28■□□□□ 0.36
TROAP-212ENST00000550346 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
TROAP-212ENST00000550346 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
TROAP-212ENST00000550346 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
TROAP-212ENST00000550346 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
TROAP-212ENST00000550346 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
TROAP-212ENST00000550346 MARCH10Q8NA82 808 aaPredicted RBP17.28■□□□□ 0.36
TROAP-212ENST00000550346 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
TROAP-212ENST00000550346 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
TROAP-212ENST00000550346 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
TROAP-212ENST00000550346 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
TROAP-212ENST00000550346 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
TROAP-212ENST00000550346 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 PARP4Q9UKK3 1724 aaKnown RBP17.26■□□□□ 0.35
TROAP-212ENST00000550346 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 MEGF6O75095 1541 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
TROAP-212ENST00000550346 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
TROAP-212ENST00000550346 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
TROAP-212ENST00000550346 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
TROAP-212ENST00000550346 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
TROAP-212ENST00000550346 TNS2Q63HR2 1409 aa17.23■□□□□ 0.35
TROAP-212ENST00000550346 CYP27B1O15528 508 aa17.23■□□□□ 0.35
TROAP-212ENST00000550346 MTHFSDQ2M296 383 aaKnown RBP17.23■□□□□ 0.35
TROAP-212ENST00000550346 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
TROAP-212ENST00000550346 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
TROAP-212ENST00000550346 PHKG2P15735 406 aa17.22■□□□□ 0.35
TROAP-212ENST00000550346 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
TROAP-212ENST00000550346 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
TROAP-212ENST00000550346 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
TROAP-212ENST00000550346 CCDC125Q86Z20 511 aa17.21■□□□□ 0.35
TROAP-212ENST00000550346 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
TROAP-212ENST00000550346 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
TROAP-212ENST00000550346 NKX1-1Q15270 411 aaPredicted RBP17.2■□□□□ 0.34
TROAP-212ENST00000550346 ACSBG1Q96GR2 724 aa17.2■□□□□ 0.34
TROAP-212ENST00000550346 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
TROAP-212ENST00000550346 LRRC37A3O60309 1634 aa17.2■□□□□ 0.34
TROAP-212ENST00000550346 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
TROAP-212ENST00000550346 TRIM37O94972 964 aa17.19■□□□□ 0.34
TROAP-212ENST00000550346 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
TROAP-212ENST00000550346 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
TROAP-212ENST00000550346 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
TROAP-212ENST00000550346 PRIM1P49642 420 aaKnown RBP17.18■□□□□ 0.34
TROAP-212ENST00000550346 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
TROAP-212ENST00000550346 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
TROAP-212ENST00000550346 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
TROAP-212ENST00000550346 RIPK4P57078 832 aa17.17■□□□□ 0.34
TROAP-212ENST00000550346 CABP4P57796 275 aa17.17■□□□□ 0.34
TROAP-212ENST00000550346 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
TROAP-212ENST00000550346 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
TROAP-212ENST00000550346 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
TROAP-212ENST00000550346 APBA3O96018 575 aa17.15■□□□□ 0.34
TROAP-212ENST00000550346 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
TROAP-212ENST00000550346 TEFQ10587 303 aa17.15■□□□□ 0.34
TROAP-212ENST00000550346 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
TROAP-212ENST00000550346 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
TROAP-212ENST00000550346 BCL9O00512 1426 aa17.14■□□□□ 0.33
TROAP-212ENST00000550346 APAF1O14727 1248 aa17.14■□□□□ 0.33
TROAP-212ENST00000550346 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
TROAP-212ENST00000550346 KCNQ2O43526 872 aa17.14■□□□□ 0.33
TROAP-212ENST00000550346 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
TROAP-212ENST00000550346 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.33
TROAP-212ENST00000550346 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
TROAP-212ENST00000550346 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
TROAP-212ENST00000550346 RRP7AQ9Y3A4 280 aaKnown RBP17.13■□□□□ 0.33
TROAP-212ENST00000550346 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
TROAP-212ENST00000550346 BAG6P46379 1132 aa17.12■□□□□ 0.33
TROAP-212ENST00000550346 MCM10Q7L590 875 aa17.11■□□□□ 0.33
TROAP-212ENST00000550346 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
TROAP-212ENST00000550346 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
TROAP-212ENST00000550346 PIGBQ92521 554 aa17.1■□□□□ 0.33
TROAP-212ENST00000550346 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
TROAP-212ENST00000550346 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
TROAP-212ENST00000550346 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
TROAP-212ENST00000550346 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
TROAP-212ENST00000550346 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
TROAP-212ENST00000550346 SBF2Q86WG5 1849 aa17.08■□□□□ 0.33
TROAP-212ENST00000550346 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
TROAP-212ENST00000550346 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
TROAP-212ENST00000550346 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
TROAP-212ENST00000550346 PLSCR1O15162 318 aa17.07■□□□□ 0.32
TROAP-212ENST00000550346 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms