RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PDCP20941 246 aa12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 KRT85P78386 507 aa12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 NUDT16Q96DE0 195 aaKnown RBP12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
SMARCC2-209ENST00000550164 PSMA5P28066 241 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CASTP20810 708 aaKnown RBP12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 TNNT3P45378 269 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CYB5RLQ6IPT4 315 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 ZBTB7BO15156 539 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CAMK4Q16566 473 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-209ENST00000550164 CBX1P83916 185 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 PLEKHM2Q8IWE5 1019 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 USP19O94966 1318 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 PDRG1Q9NUG6 133 aa12.21□□□□□ -0.45
SMARCC2-209ENST00000550164 PLCH2O75038 1416 aa12.21□□□□□ -0.46
SMARCC2-209ENST00000550164 DDX58O95786 925 aaKnown RBP12.21□□□□□ -0.46
SMARCC2-209ENST00000550164 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.46
SMARCC2-209ENST00000550164 KRT24Q2M2I5 525 aa12.21□□□□□ -0.46
SMARCC2-209ENST00000550164 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 OFD1O75665 1012 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 GAS2L3Q86XJ1 694 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 ANKRD44Q8N8A2 993 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 NUP62CLQ9H1M0 184 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 LRRFIP2Q9Y608 721 aaKnown RBP12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 ADCY5O95622 1261 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 OTUD7AQ8TE49 926 aaPredicted RBP12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 SIL1Q9H173 461 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
SMARCC2-209ENST00000550164 CPLX1O14810 134 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 MCM5P33992 734 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 PDCL2Q8N4E4 241 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 PDE1AP54750 535 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 POLKQ9UBT6 870 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
SMARCC2-209ENST00000550164 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 FANCAO15360 1455 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 BLOC1S2Q6QNY1 142 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 MAP3K11Q16584 847 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-209ENST00000550164 WDR7Q9Y4E6 1490 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 AACSQ86V21 672 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 ZHX1Q9UKY1 873 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 LIMCH1Q9UPQ0 1083 aa12.17□□□□□ -0.46
SMARCC2-209ENST00000550164 PTPRCP08575 1304 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 FAM69CQ0P6D2 419 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 GIMAP6Q6P9H5 292 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 STX6O43752 255 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 FLIIQ13045 1269 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 KIF1BPQ96EK5 621 aa12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-209ENST00000550164 PBRM1Q86U86 1689 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 SMC2O95347 1197 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 CEP85Q6P2H3 762 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 PTPRTO14522 1441 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 CNPY2Q9Y2B0 182 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 SLC26A8Q96RN1 970 aa12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 NAT10Q9H0A0 1025 aaKnown RBP12.15□□□□□ -0.46
SMARCC2-209ENST00000550164 HIP1O00291 1037 aa12.14□□□□□ -0.47
SMARCC2-209ENST00000550164 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms