RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 ADCY9O60503 1353 aa12.53□□□□□ -0.4
AC055716.1-201ENST00000550077 MSH5O43196 834 aa12.52□□□□□ -0.41
AC055716.1-201ENST00000550077 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
AC055716.1-201ENST00000550077 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
AC055716.1-201ENST00000550077 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
AC055716.1-201ENST00000550077 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
AC055716.1-201ENST00000550077 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
AC055716.1-201ENST00000550077 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
AC055716.1-201ENST00000550077 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
AC055716.1-201ENST00000550077 C5P01031 1676 aa12.51□□□□□ -0.41
AC055716.1-201ENST00000550077 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
AC055716.1-201ENST00000550077 TOGARAM1Q9Y4F4 1720 aa12.5□□□□□ -0.41
AC055716.1-201ENST00000550077 ANKRD36BQ8N2N9 1353 aa12.49□□□□□ -0.41
AC055716.1-201ENST00000550077 CCNL1Q9UK58 526 aaPredicted RBP12.49□□□□□ -0.41
AC055716.1-201ENST00000550077 MEGF6O75095 1541 aa12.48□□□□□ -0.41
AC055716.1-201ENST00000550077 KIF3CO14782 793 aa12.48□□□□□ -0.41
AC055716.1-201ENST00000550077 SLC12A5Q9H2X9 1139 aa12.47□□□□□ -0.41
AC055716.1-201ENST00000550077 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
AC055716.1-201ENST00000550077 IP6K1Q92551 441 aa12.46□□□□□ -0.41
AC055716.1-201ENST00000550077 UBR3Q6ZT12 1888 aa12.45□□□□□ -0.42
AC055716.1-201ENST00000550077 SIN3AQ96ST3 1273 aa12.45□□□□□ -0.42
AC055716.1-201ENST00000550077 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
AC055716.1-201ENST00000550077 ITGB4P16144 1822 aa12.44□□□□□ -0.42
AC055716.1-201ENST00000550077 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
AC055716.1-201ENST00000550077 KIAA1551Q9HCM1 1747 aa12.44□□□□□ -0.42
AC055716.1-201ENST00000550077 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
AC055716.1-201ENST00000550077 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
AC055716.1-201ENST00000550077 HTRA3P83110 453 aa12.42□□□□□ -0.42
AC055716.1-201ENST00000550077 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
AC055716.1-201ENST00000550077 USP47Q96K76 1375 aa12.42□□□□□ -0.42
AC055716.1-201ENST00000550077 HOXC9P31274 260 aa12.41□□□□□ -0.42
AC055716.1-201ENST00000550077 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
AC055716.1-201ENST00000550077 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
AC055716.1-201ENST00000550077 WDR90Q96KV7 1748 aa12.4□□□□□ -0.42
AC055716.1-201ENST00000550077 EDC4Q6P2E9 1401 aaKnown RBP12.4□□□□□ -0.42
AC055716.1-201ENST00000550077 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
AC055716.1-201ENST00000550077 COL13A1Q5TAT6 717 aaPredicted RBP12.4□□□□□ -0.42
AC055716.1-201ENST00000550077 PHF14O94880 888 aa12.39□□□□□ -0.43
AC055716.1-201ENST00000550077 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
AC055716.1-201ENST00000550077 CAPN15O75808 1086 aa12.38□□□□□ -0.43
AC055716.1-201ENST00000550077 MPRIPQ6WCQ1 1025 aa12.38□□□□□ -0.43
AC055716.1-201ENST00000550077 NMRK2Q9NPI5 230 aa12.38□□□□□ -0.43
AC055716.1-201ENST00000550077 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
AC055716.1-201ENST00000550077 KIF13BQ9NQT8 1826 aa12.37□□□□□ -0.43
AC055716.1-201ENST00000550077 NEUROD1Q13562 356 aa12.37□□□□□ -0.43
AC055716.1-201ENST00000550077 RRS1Q15050 365 aaKnown RBP12.37□□□□□ -0.43
AC055716.1-201ENST00000550077 HDGFL2Q7Z4V5 671 aaPredicted RBP12.37□□□□□ -0.43
AC055716.1-201ENST00000550077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
AC055716.1-201ENST00000550077 CYP27B1O15528 508 aa12.36□□□□□ -0.43
AC055716.1-201ENST00000550077 AMPHP49418 695 aa12.36□□□□□ -0.43
AC055716.1-201ENST00000550077 APLP1P51693 650 aa12.36□□□□□ -0.43
AC055716.1-201ENST00000550077 LINC00116Q8NCU8 138 aa12.36□□□□□ -0.43
AC055716.1-201ENST00000550077 BRCA1P38398 1863 aaKnown RBP12.35□□□□□ -0.43
AC055716.1-201ENST00000550077 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
AC055716.1-201ENST00000550077 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
AC055716.1-201ENST00000550077 TOMM70O94826 608 aa12.34□□□□□ -0.43
AC055716.1-201ENST00000550077 ITPK1Q13572 414 aa12.33□□□□□ -0.44
AC055716.1-201ENST00000550077 FLAD1Q8NFF5 587 aa12.33□□□□□ -0.44
AC055716.1-201ENST00000550077 PIGBQ92521 554 aa12.33□□□□□ -0.44
AC055716.1-201ENST00000550077 AK7Q96M32 723 aa12.33□□□□□ -0.44
AC055716.1-201ENST00000550077 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
AC055716.1-201ENST00000550077 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
AC055716.1-201ENST00000550077 COG3Q96JB2 828 aa12.32□□□□□ -0.44
AC055716.1-201ENST00000550077 TERF2IPQ9NYB0 399 aa12.32□□□□□ -0.44
AC055716.1-201ENST00000550077 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
AC055716.1-201ENST00000550077 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
AC055716.1-201ENST00000550077 MMP10P09238 476 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 ARHGAP27Q6ZUM4 889 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 KLRG1Q96E93 195 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 ASAP1Q9ULH1 1129 aa12.3□□□□□ -0.44
AC055716.1-201ENST00000550077 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 FYB1O15117 783 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 DPEP1P16444 411 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 SIK1P57059 783 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 SBF1O95248 1867 aa12.29□□□□□ -0.44
AC055716.1-201ENST00000550077 ARFGEF1Q9Y6D6 1849 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 GNPATO15228 680 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 KCNA3P22001 575 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 SSFA2P28290 1259 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 TESK2Q96S53 571 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
AC055716.1-201ENST00000550077 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.45
AC055716.1-201ENST00000550077 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
AC055716.1-201ENST00000550077 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
AC055716.1-201ENST00000550077 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms