RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 PBRM1Q86U86 1689 aa9.04□□□□□ -0.96
PFDN5-209ENST00000550069 PIK3CDO00329 1044 aa9.04□□□□□ -0.96
PFDN5-209ENST00000550069 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
PFDN5-209ENST00000550069 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
PFDN5-209ENST00000550069 CDV3Q9UKY7 258 aaKnown RBP9.04□□□□□ -0.96
PFDN5-209ENST00000550069 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
PFDN5-209ENST00000550069 LILRA1O75019 489 aa9.03□□□□□ -0.96
PFDN5-209ENST00000550069 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
PFDN5-209ENST00000550069 SCTRP47872 440 aa9.03□□□□□ -0.96
PFDN5-209ENST00000550069 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
PFDN5-209ENST00000550069 ATP13A2Q9NQ11 1180 aa9.03□□□□□ -0.96
PFDN5-209ENST00000550069 CYLDQ9NQC7 956 aa9.03□□□□□ -0.96
PFDN5-209ENST00000550069 SYNJ2O15056 1496 aa9.02□□□□□ -0.96
PFDN5-209ENST00000550069 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
PFDN5-209ENST00000550069 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
PFDN5-209ENST00000550069 PHTF2Q8N3S3 785 aa9.02□□□□□ -0.97
PFDN5-209ENST00000550069 ALG2Q9H553 416 aa9.02□□□□□ -0.97
PFDN5-209ENST00000550069 KIF27Q86VH2 1401 aa9.02□□□□□ -0.97
PFDN5-209ENST00000550069 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
PFDN5-209ENST00000550069 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
PFDN5-209ENST00000550069 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
PFDN5-209ENST00000550069 AQRO60306 1485 aaKnown RBP eCLIP9.01□□□□□ -0.976e-7■■■■■ 36.8
PFDN5-209ENST00000550069 CUL7Q14999 1698 aa9□□□□□ -0.97
PFDN5-209ENST00000550069 A6NJR5 290 aa9□□□□□ -0.97
PFDN5-209ENST00000550069 MEIOBQ8N635 442 aa9□□□□□ -0.97
PFDN5-209ENST00000550069 EMILIN1Q9Y6C2 1016 aa9□□□□□ -0.97
PFDN5-209ENST00000550069 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
PFDN5-209ENST00000550069 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
PFDN5-209ENST00000550069 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
PFDN5-209ENST00000550069 UCN2Q96RP3 112 aa8.99□□□□□ -0.97
PFDN5-209ENST00000550069 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
PFDN5-209ENST00000550069 PCDHB11Q9Y5F2 797 aa8.99□□□□□ -0.97
PFDN5-209ENST00000550069 EEA1Q15075 1411 aa8.98□□□□□ -0.97
PFDN5-209ENST00000550069 C6orf118Q5T5N4 469 aa8.98□□□□□ -0.97
PFDN5-209ENST00000550069 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
PFDN5-209ENST00000550069 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
PFDN5-209ENST00000550069 CHD1O14646 1710 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 SEMA3FQ13275 785 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 Q6ZVU0 165 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 SEPT12Q8IYM1 358 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
PFDN5-209ENST00000550069 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.97
PFDN5-209ENST00000550069 ADAMTS12P58397 1594 aa8.96□□□□□ -0.97
PFDN5-209ENST00000550069 SOBPA7XYQ1 873 aa8.96□□□□□ -0.98
PFDN5-209ENST00000550069 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.98
PFDN5-209ENST00000550069 HDGFL1Q5TGJ6 251 aa8.96□□□□□ -0.98
PFDN5-209ENST00000550069 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
PFDN5-209ENST00000550069 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
PFDN5-209ENST00000550069 TRAK2O60296 914 aa8.95□□□□□ -0.98
PFDN5-209ENST00000550069 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
PFDN5-209ENST00000550069 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
PFDN5-209ENST00000550069 RELBQ01201 579 aa8.95□□□□□ -0.98
PFDN5-209ENST00000550069 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
PFDN5-209ENST00000550069 GLMNQ92990 594 aa8.95□□□□□ -0.98
PFDN5-209ENST00000550069 CHIC2Q9UKJ5 165 aa8.95□□□□□ -0.98
PFDN5-209ENST00000550069 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
PFDN5-209ENST00000550069 MCCD1P59942 119 aaPredicted RBP8.94□□□□□ -0.98
PFDN5-209ENST00000550069 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
PFDN5-209ENST00000550069 ZNF395Q9H8N7 513 aaPredicted RBP8.94□□□□□ -0.98
PFDN5-209ENST00000550069 SOX11P35716 441 aa8.93□□□□□ -0.98
PFDN5-209ENST00000550069 SLFNL1Q499Z3 407 aa8.93□□□□□ -0.98
PFDN5-209ENST00000550069 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
PFDN5-209ENST00000550069 GRIN2AQ12879 1464 aa8.93□□□□□ -0.98
PFDN5-209ENST00000550069 NUP160Q12769 1436 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 ADH1AP07327 375 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 BMP2P12643 396 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 CC2D2BQ6DHV5 1058 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 TBC1D9Q6ZT07 1266 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 PLPP7Q8NBV4 271 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 DOLKQ9UPQ8 538 aa8.92□□□□□ -0.98
PFDN5-209ENST00000550069 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
PFDN5-209ENST00000550069 IGF1RP08069 1367 aa8.91□□□□□ -0.98
PFDN5-209ENST00000550069 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
PFDN5-209ENST00000550069 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
PFDN5-209ENST00000550069 TRIM47Q96LD4 638 aa8.91□□□□□ -0.98
PFDN5-209ENST00000550069 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
PFDN5-209ENST00000550069 SKIP12755 728 aa8.9□□□□□ -0.98
PFDN5-209ENST00000550069 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.98
PFDN5-209ENST00000550069 INSM2Q96T92 566 aaPredicted RBP8.9□□□□□ -0.98
PFDN5-209ENST00000550069 RAB6BQ9NRW1 208 aa8.89□□□□□ -0.99
PFDN5-209ENST00000550069 DNMT3LQ9UJW3 386 aa8.89□□□□□ -0.99
PFDN5-209ENST00000550069 ARID3CA6NKF2 412 aa8.88□□□□□ -0.99
PFDN5-209ENST00000550069 SPINT1O43278 529 aa8.88□□□□□ -0.99
PFDN5-209ENST00000550069 PTGIRP43119 386 aa8.88□□□□□ -0.99
PFDN5-209ENST00000550069 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
PFDN5-209ENST00000550069 TSEN34Q9BSV6 310 aaKnown RBP8.88□□□□□ -0.99
PFDN5-209ENST00000550069 SHROOM2Q13796 1616 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 CARMIL1Q5VZK9 1371 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
PFDN5-209ENST00000550069 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 NCOA4Q13772 614 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 SCARF1Q14162 830 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
PFDN5-209ENST00000550069 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
PFDN5-209ENST00000550069 ARHGEF10LQ9HCE6 1279 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms