RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 NLGN2Q8NFZ4 835 aa29.74■■■□□ 2.35
SLC38A1-207ENST00000549633 SLC16A10Q8TF71 515 aa29.74■■■□□ 2.35
SLC38A1-207ENST00000549633 TFCP2L1Q9NZI6 479 aa29.74■■■□□ 2.35
SLC38A1-207ENST00000549633 TERF2IPQ9NYB0 399 aa29.73■■■□□ 2.35
SLC38A1-207ENST00000549633 NSD2O96028 1365 aa29.73■■■□□ 2.35
SLC38A1-207ENST00000549633 ANKRD36BQ8N2N9 1353 aa29.71■■■□□ 2.35
SLC38A1-207ENST00000549633 MAP3K19Q56UN5 1328 aa29.7■■■□□ 2.34
SLC38A1-207ENST00000549633 MEGF6O75095 1541 aa29.69■■■□□ 2.34
SLC38A1-207ENST00000549633 HOXC9P31274 260 aa29.67■■■□□ 2.34
SLC38A1-207ENST00000549633 GOLGB1Q14789 3259 aaKnown RBP29.66■■■□□ 2.34
SLC38A1-207ENST00000549633 GIGYF1O75420 1035 aaPredicted RBP29.65■■■□□ 2.34
SLC38A1-207ENST00000549633 ZCRB1Q8TBF4 217 aaKnown RBP29.64■■■□□ 2.34
SLC38A1-207ENST00000549633 CCNL1Q9UK58 526 aaPredicted RBP29.64■■■□□ 2.34
SLC38A1-207ENST00000549633 MSH5O43196 834 aa29.63■■■□□ 2.33
SLC38A1-207ENST00000549633 YBX3P16989 372 aaKnown RBP eCLIP29.63■■■□□ 2.336e-8■■□□□ 11.4
SLC38A1-207ENST00000549633 AMPHP49418 695 aa29.63■■■□□ 2.33
SLC38A1-207ENST00000549633 COG3Q96JB2 828 aa29.63■■■□□ 2.33
SLC38A1-207ENST00000549633 COL23A1Q86Y22 540 aaPredicted RBP29.61■■■□□ 2.33
SLC38A1-207ENST00000549633 MSL1Q68DK7 614 aa29.6■■■□□ 2.33
SLC38A1-207ENST00000549633 USHBP1Q8N6Y0 703 aa29.6■■■□□ 2.33
SLC38A1-207ENST00000549633 C5P01031 1676 aa29.59■■■□□ 2.33
SLC38A1-207ENST00000549633 PUS7Q96PZ0 661 aaKnown RBP29.58■■■□□ 2.33
SLC38A1-207ENST00000549633 USP47Q96K76 1375 aa29.57■■■□□ 2.32
SLC38A1-207ENST00000549633 RRS1Q15050 365 aaKnown RBP29.57■■■□□ 2.32
SLC38A1-207ENST00000549633 NBPF6Q5VWK0 638 aa29.57■■■□□ 2.32
SLC38A1-207ENST00000549633 NBPF4Q96M43 638 aa29.57■■■□□ 2.32
SLC38A1-207ENST00000549633 TESK2Q96S53 571 aa29.57■■■□□ 2.32
SLC38A1-207ENST00000549633 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
SLC38A1-207ENST00000549633 TAF1LQ8IZX4 1826 aa29.53■■■□□ 2.32
SLC38A1-207ENST00000549633 ST20-MTHFSA0A0A6YYL1 179 aa29.53■■■□□ 2.32
SLC38A1-207ENST00000549633 RTL1A6NKG5 1358 aa29.52■■■□□ 2.32
SLC38A1-207ENST00000549633 GRIN3BO60391 1043 aa29.5■■■□□ 2.31
SLC38A1-207ENST00000549633 GGNBP2Q9H3C7 697 aa29.5■■■□□ 2.31
SLC38A1-207ENST00000549633 TOGARAM1Q9Y4F4 1720 aa29.49■■■□□ 2.31
SLC38A1-207ENST00000549633 RAPGEF4Q8WZA2 1011 aa29.48■■■□□ 2.31
SLC38A1-207ENST00000549633 ATP10DQ9P241 1426 aa29.47■■■□□ 2.31
SLC38A1-207ENST00000549633 FYB1O15117 783 aa29.46■■■□□ 2.31
SLC38A1-207ENST00000549633 ITGB4P16144 1822 aa29.45■■■□□ 2.31
SLC38A1-207ENST00000549633 PALLDQ8WX93 1383 aa29.45■■■□□ 2.31
SLC38A1-207ENST00000549633 TATP17735 454 aaPredicted RBP29.45■■■□□ 2.31
SLC38A1-207ENST00000549633 SMG6Q86US8 1419 aaKnown RBP29.45■■■□□ 2.3
SLC38A1-207ENST00000549633 KIF20BQ96Q89 1820 aa29.44■■■□□ 2.3
SLC38A1-207ENST00000549633 HSP90AB2PQ58FF8 381 aa29.44■■■□□ 2.3
SLC38A1-207ENST00000549633 C4BP0C0L5 1744 aa29.44■■■□□ 2.3
SLC38A1-207ENST00000549633 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
SLC38A1-207ENST00000549633 MPRIPQ6WCQ1 1025 aa29.43■■■□□ 2.3
SLC38A1-207ENST00000549633 SMIM5Q71RC9 77 aa29.43■■■□□ 2.3
SLC38A1-207ENST00000549633 AMIGO3Q86WK7 504 aa29.43■■■□□ 2.3
SLC38A1-207ENST00000549633 PCDH11XQ9BZA7 1347 aa29.42■■■□□ 2.3
SLC38A1-207ENST00000549633 PCDH11YQ9BZA8 1340 aa29.42■■■□□ 2.3
SLC38A1-207ENST00000549633 WWC3Q9ULE0 1092 aa29.41■■■□□ 2.3
SLC38A1-207ENST00000549633 CD2APQ9Y5K6 639 aa29.4■■■□□ 2.3
SLC38A1-207ENST00000549633 CYP27B1O15528 508 aa29.39■■■□□ 2.3
SLC38A1-207ENST00000549633 UBR3Q6ZT12 1888 aa29.39■■■□□ 2.3
SLC38A1-207ENST00000549633 INSRP06213 1382 aa29.39■■■□□ 2.29
SLC38A1-207ENST00000549633 ZNF526Q8TF50 670 aaPredicted RBP29.38■■■□□ 2.29
SLC38A1-207ENST00000549633 PKD1L3Q7Z443 1732 aa29.37■■■□□ 2.29
SLC38A1-207ENST00000549633 PHF14O94880 888 aa29.36■■■□□ 2.29
SLC38A1-207ENST00000549633 IFFO2Q5TF58 517 aa29.36■■■□□ 2.29
SLC38A1-207ENST00000549633 FLAD1Q8NFF5 587 aa29.36■■■□□ 2.29
SLC38A1-207ENST00000549633 CEP350Q5VT06 3117 aa29.36■■■□□ 2.29
SLC38A1-207ENST00000549633 ADCY9O60503 1353 aa29.35■■■□□ 2.29
SLC38A1-207ENST00000549633 FLT4P35916 1363 aa29.35■■■□□ 2.29
SLC38A1-207ENST00000549633 AK7Q96M32 723 aa29.34■■■□□ 2.29
SLC38A1-207ENST00000549633 GPBP1L1Q9HC44 474 aaPredicted RBP29.34■■■□□ 2.29
SLC38A1-207ENST00000549633 MAP2P11137 1827 aaKnown RBP29.33■■■□□ 2.29
SLC38A1-207ENST00000549633 IGSF1Q8N6C5 1336 aa29.31■■■□□ 2.28
SLC38A1-207ENST00000549633 PIGBQ92521 554 aa29.31■■■□□ 2.28
SLC38A1-207ENST00000549633 EMILIN1Q9Y6C2 1016 aa29.31■■■□□ 2.28
SLC38A1-207ENST00000549633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.3■■■□□ 2.28
SLC38A1-207ENST00000549633 TMF1P82094 1093 aa29.3■■■□□ 2.28
SLC38A1-207ENST00000549633 SMARCC1Q92922 1105 aaPredicted RBP29.29■■■□□ 2.28
SLC38A1-207ENST00000549633 SLC24A1O60721 1099 aa29.28■■■□□ 2.28
SLC38A1-207ENST00000549633 LINC00116Q8NCU8 138 aa29.27■■■□□ 2.28
SLC38A1-207ENST00000549633 KIF24Q5T7B8 1368 aa29.26■■■□□ 2.27
SLC38A1-207ENST00000549633 CARD14Q9BXL6 1004 aa29.25■■■□□ 2.27
SLC38A1-207ENST00000549633 NCAPD2Q15021 1401 aa29.24■■■□□ 2.27
SLC38A1-207ENST00000549633 ANKRD26Q9UPS8 1709 aa29.23■■■□□ 2.27
SLC38A1-207ENST00000549633 PPM1GO15355 546 aaPredicted RBP29.23■■■□□ 2.27
SLC38A1-207ENST00000549633 LOC102724428A0A0B4J2F2 783 aa29.22■■■□□ 2.27
SLC38A1-207ENST00000549633 HSPA6P17066 643 aa29.22■■■□□ 2.27
SLC38A1-207ENST00000549633 HMGB2P26583 209 aaKnown RBP29.22■■■□□ 2.27
SLC38A1-207ENST00000549633 SIK1P57059 783 aa29.22■■■□□ 2.27
SLC38A1-207ENST00000549633 NKX1-1Q15270 411 aaPredicted RBP29.22■■■□□ 2.27
SLC38A1-207ENST00000549633 NSD3Q9BZ95 1437 aa29.21■■■□□ 2.27
SLC38A1-207ENST00000549633 SSFA2P28290 1259 aa29.21■■■□□ 2.27
SLC38A1-207ENST00000549633 ITPK1Q13572 414 aa29.21■■■□□ 2.27
SLC38A1-207ENST00000549633 ASAP1Q9ULH1 1129 aa29.2■■■□□ 2.26
SLC38A1-207ENST00000549633 GNPATO15228 680 aa29.19■■■□□ 2.26
SLC38A1-207ENST00000549633 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
SLC38A1-207ENST00000549633 KIAA1551Q9HCM1 1747 aa29.19■■■□□ 2.26
SLC38A1-207ENST00000549633 N4BP2Q86UW6 1770 aaPredicted RBP29.18■■■□□ 2.26
SLC38A1-207ENST00000549633 EYA1Q99502 592 aa29.17■■■□□ 2.26
SLC38A1-207ENST00000549633 TMOD3Q9NYL9 352 aa29.17■■■□□ 2.26
SLC38A1-207ENST00000549633 CICQ96RK0 1608 aaPredicted RBP29.16■■■□□ 2.26
SLC38A1-207ENST00000549633 KIF3CO14782 793 aa29.15■■■□□ 2.26
SLC38A1-207ENST00000549633 ATP6V1AP38606 617 aa29.15■■■□□ 2.26
SLC38A1-207ENST00000549633 KIF13BQ9NQT8 1826 aa29.15■■■□□ 2.26
SLC38A1-207ENST00000549633 PXDNLA1KZ92 1463 aa29.13■■■□□ 2.25
SLC38A1-207ENST00000549633 MMP10P09238 476 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms