RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 ZMYND15Q9H091 742 aa7.83□□□□□ -1.16
MRPL42-205ENST00000549561 SOS2Q07890 1332 aaPredicted RBP7.82□□□□□ -1.16
MRPL42-205ENST00000549561 PTGIRP43119 386 aa7.82□□□□□ -1.16
MRPL42-205ENST00000549561 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
MRPL42-205ENST00000549561 RELBQ01201 579 aa7.81□□□□□ -1.16
MRPL42-205ENST00000549561 USP4Q13107 963 aa7.81□□□□□ -1.16
MRPL42-205ENST00000549561 CYP2U1Q7Z449 544 aa7.81□□□□□ -1.16
MRPL42-205ENST00000549561 LZTS3O60299 673 aaPredicted RBP7.8□□□□□ -1.16
MRPL42-205ENST00000549561 MYCP01106 439 aaPredicted RBP7.8□□□□□ -1.16
MRPL42-205ENST00000549561 SKIP12755 728 aa7.79□□□□□ -1.16
MRPL42-205ENST00000549561 OXLD1Q5BKU9 147 aa7.79□□□□□ -1.16
MRPL42-205ENST00000549561 SIRT1Q96EB6 747 aa7.79□□□□□ -1.16
MRPL42-205ENST00000549561 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
MRPL42-205ENST00000549561 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 GNRH1P01148 92 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 TBC1D9Q6ZT07 1266 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 PLEKHM2Q8IWE5 1019 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 CALR3Q96L12 384 aaKnown RBP7.78□□□□□ -1.16
MRPL42-205ENST00000549561 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
MRPL42-205ENST00000549561 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
MRPL42-205ENST00000549561 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
MRPL42-205ENST00000549561 ATP9BO43861 1147 aa7.77□□□□□ -1.17
MRPL42-205ENST00000549561 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
MRPL42-205ENST00000549561 ESF1Q9H501 851 aaKnown RBP7.77□□□□□ -1.17
MRPL42-205ENST00000549561 ZNF777Q9ULD5 760 aaPredicted RBP7.77□□□□□ -1.17
MRPL42-205ENST00000549561 CLN3Q13286 438 aa7.76□□□□□ -1.17
MRPL42-205ENST00000549561 NCOA4Q13772 614 aa7.76□□□□□ -1.17
MRPL42-205ENST00000549561 EML3Q32P44 896 aa7.76□□□□□ -1.17
MRPL42-205ENST00000549561 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
MRPL42-205ENST00000549561 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
MRPL42-205ENST00000549561 RNF217Q8TC41 542 aa7.76□□□□□ -1.17
MRPL42-205ENST00000549561 SOBPA7XYQ1 873 aa7.75□□□□□ -1.17
MRPL42-205ENST00000549561 MAN1A2O60476 641 aa7.75□□□□□ -1.17
MRPL42-205ENST00000549561 GPC1P35052 558 aa7.75□□□□□ -1.17
MRPL42-205ENST00000549561 RNF144AP50876 292 aaPredicted RBP7.75□□□□□ -1.17
MRPL42-205ENST00000549561 ARHGEF10LQ9HCE6 1279 aa7.75□□□□□ -1.17
MRPL42-205ENST00000549561 POLMQ9NP87 494 aaPredicted RBP7.75□□□□□ -1.17
MRPL42-205ENST00000549561 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
MRPL42-205ENST00000549561 USP17L3A6NCW0 530 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 USP17L4A6NCW7 530 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 IL2RAP01589 272 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 USP17L2Q6R6M4 530 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 USP17L1Q7RTZ2 530 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 XAGE2Q96GT9 111 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 PPP1R12CQ9BZL4 782 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 TFIP11Q9UBB9 837 aaKnown RBP7.74□□□□□ -1.17
MRPL42-205ENST00000549561 NOD1Q9Y239 953 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 PCDHGA11Q9Y5H2 935 aa7.74□□□□□ -1.17
MRPL42-205ENST00000549561 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
MRPL42-205ENST00000549561 PALM3A6NDB9 673 aaPredicted RBP7.73□□□□□ -1.17
MRPL42-205ENST00000549561 WASLO00401 505 aaPredicted RBP7.73□□□□□ -1.17
MRPL42-205ENST00000549561 SCNN1DP51172 638 aa7.73□□□□□ -1.17
MRPL42-205ENST00000549561 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
MRPL42-205ENST00000549561 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
MRPL42-205ENST00000549561 ESYT1Q9BSJ8 1104 aa7.73□□□□□ -1.17
MRPL42-205ENST00000549561 ETNK1Q9HBU6 452 aa7.73□□□□□ -1.17
MRPL42-205ENST00000549561 FIGNL2A6NMB9 653 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 MEN1O00255 615 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 ESCO1Q5FWF5 840 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 CNKSR1Q969H4 720 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 GRIP2Q9C0E4 1043 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
MRPL42-205ENST00000549561 STAU1O95793 577 aaKnown RBP7.71□□□□□ -1.18
MRPL42-205ENST00000549561 NPAS3Q8IXF0 933 aa7.71□□□□□ -1.18
MRPL42-205ENST00000549561 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
MRPL42-205ENST00000549561 NXF1Q9UBU9 619 aaKnown RBP7.71□□□□□ -1.18
MRPL42-205ENST00000549561 WFS1O76024 890 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 INHAP05111 366 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 GDF10P55107 478 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 GTF2IP78347 998 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 CFAP70Q5T0N1 1121 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 TRIM50Q86XT4 487 aa7.7□□□□□ -1.18
MRPL42-205ENST00000549561 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
MRPL42-205ENST00000549561 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
MRPL42-205ENST00000549561 TERTO14746 1132 aaKnown RBP7.69□□□□□ -1.18
MRPL42-205ENST00000549561 ZBTB7BO15156 539 aaPredicted RBP7.69□□□□□ -1.18
MRPL42-205ENST00000549561 CENPCQ03188 943 aa7.69□□□□□ -1.18
MRPL42-205ENST00000549561 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
MRPL42-205ENST00000549561 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
MRPL42-205ENST00000549561 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 CLDN10P78369 228 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 PTSQ03393 145 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
MRPL42-205ENST00000549561 KANK4Q5T7N3 995 aaPredicted RBP7.68□□□□□ -1.18
MRPL42-205ENST00000549561 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
MRPL42-205ENST00000549561 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
MRPL42-205ENST00000549561 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
MRPL42-205ENST00000549561 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
MRPL42-205ENST00000549561 PRICKLE2Q7Z3G6 844 aa7.67□□□□□ -1.18
MRPL42-205ENST00000549561 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
MRPL42-205ENST00000549561 KIAA1024Q9UPX6 916 aa7.67□□□□□ -1.18
MRPL42-205ENST00000549561 H3BM21 787 aa7.66□□□□□ -1.18
MRPL42-205ENST00000549561 DKK1O94907 266 aa7.66□□□□□ -1.18
MRPL42-205ENST00000549561 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
MRPL42-205ENST00000549561 WDR44Q5JSH3 913 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms