RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 IRX2Q9BZI1 471 aaPredicted RBP9.8□□□□□ -0.84
COX6A1-202ENST00000549525 PDZRN3Q9UPQ7 1066 aa9.8□□□□□ -0.84
COX6A1-202ENST00000549525 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PREX2Q70Z35 1606 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 WNT7AO00755 349 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PRR20EP86478 221 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PRR20CP86479 221 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PRR20DP86480 221 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PRR20BP86481 221 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 PRR20AP86496 221 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
COX6A1-202ENST00000549525 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
COX6A1-202ENST00000549525 GFRA3O60609 400 aa9.78□□□□□ -0.84
COX6A1-202ENST00000549525 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
COX6A1-202ENST00000549525 SCAPERQ9BY12 1400 aa9.78□□□□□ -0.84
COX6A1-202ENST00000549525 CDC42BPAQ5VT25 1732 aa9.78□□□□□ -0.84
COX6A1-202ENST00000549525 RRBP1Q9P2E9 1410 aaKnown RBP9.77□□□□□ -0.85
COX6A1-202ENST00000549525 FOXJ1Q92949 421 aa9.77□□□□□ -0.85
COX6A1-202ENST00000549525 FKBPLQ9UIM3 349 aa9.77□□□□□ -0.85
COX6A1-202ENST00000549525 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.85
COX6A1-202ENST00000549525 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
COX6A1-202ENST00000549525 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
COX6A1-202ENST00000549525 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
COX6A1-202ENST00000549525 ZNF518AQ6AHZ1 1483 aa9.76□□□□□ -0.85
COX6A1-202ENST00000549525 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
COX6A1-202ENST00000549525 CDC42BPBQ9Y5S2 1711 aa9.76□□□□□ -0.85
COX6A1-202ENST00000549525 CAMSAP2Q08AD1 1489 aa9.75□□□□□ -0.85
COX6A1-202ENST00000549525 TCOF1Q13428 1488 aaKnown RBP9.75□□□□□ -0.85
COX6A1-202ENST00000549525 ARMC2Q8NEN0 867 aa9.75□□□□□ -0.85
COX6A1-202ENST00000549525 TOR4AQ9NXH8 423 aa9.75□□□□□ -0.85
COX6A1-202ENST00000549525 SPAG9O60271 1321 aaKnown RBP9.75□□□□□ -0.85
COX6A1-202ENST00000549525 ZNF644Q9H582 1327 aaPredicted RBP9.75□□□□□ -0.85
COX6A1-202ENST00000549525 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
COX6A1-202ENST00000549525 NRG2O14511 850 aaPredicted RBP9.74□□□□□ -0.85
COX6A1-202ENST00000549525 SOCS7O14512 581 aa9.74□□□□□ -0.85
COX6A1-202ENST00000549525 GPR37L1O60883 481 aa9.74□□□□□ -0.85
COX6A1-202ENST00000549525 SH3BP5LQ7L8J4 393 aa9.74□□□□□ -0.85
COX6A1-202ENST00000549525 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 SIAH2O43255 324 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 NBPF14Q5TI25 921 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 AFAP1Q8N556 730 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 EHBP1Q8NDI1 1231 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
COX6A1-202ENST00000549525 CCDC141Q6ZP82 1450 aa9.72□□□□□ -0.85
COX6A1-202ENST00000549525 ABCC1P33527 1531 aa9.72□□□□□ -0.85
COX6A1-202ENST00000549525 RAPGEF3O95398 923 aa9.72□□□□□ -0.85
COX6A1-202ENST00000549525 MCM6Q14566 821 aa9.72□□□□□ -0.85
COX6A1-202ENST00000549525 POGZQ7Z3K3 1410 aa9.72□□□□□ -0.85
COX6A1-202ENST00000549525 ARHGEF5Q12774 1597 aa9.71□□□□□ -0.85
COX6A1-202ENST00000549525 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.85
COX6A1-202ENST00000549525 GPKOWQ92917 476 aaPredicted RBP eCLIP9.71□□□□□ -0.86
COX6A1-202ENST00000549525 PCGF6Q9BYE7 350 aa9.71□□□□□ -0.86
COX6A1-202ENST00000549525 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
COX6A1-202ENST00000549525 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.86
COX6A1-202ENST00000549525 MBD5Q9P267 1494 aa9.71□□□□□ -0.86
COX6A1-202ENST00000549525 SYCP2Q9BX26 1530 aa9.71□□□□□ -0.86
COX6A1-202ENST00000549525 PPRC1Q5VV67 1664 aaKnown RBP9.71□□□□□ -0.86
COX6A1-202ENST00000549525 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
COX6A1-202ENST00000549525 ITGAEP38570 1179 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 PDXDC2PQ6P474 469 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
COX6A1-202ENST00000549525 CYP4X1Q8N118 509 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
COX6A1-202ENST00000549525 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 DAPK1P53355 1430 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 MLH3Q9UHC1 1453 aa9.7□□□□□ -0.86
COX6A1-202ENST00000549525 J3QL48 77 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 KDM6BO15054 1643 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 AGERQ15109 404 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 C1QTNF2Q9BXJ5 285 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 SHANK2Q9UPX8 1470 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 TRAPPC8Q9Y2L5 1435 aa9.69□□□□□ -0.86
COX6A1-202ENST00000549525 ABCC5O15440 1437 aa9.68□□□□□ -0.86
COX6A1-202ENST00000549525 C9orf84Q5VXU9 1444 aa9.68□□□□□ -0.86
COX6A1-202ENST00000549525 LCE2BO14633 110 aa9.68□□□□□ -0.86
COX6A1-202ENST00000549525 SMPD1P17405 629 aa9.68□□□□□ -0.86
COX6A1-202ENST00000549525 MAGEB6P1A0A0J9YX57 407 aa9.67□□□□□ -0.86
COX6A1-202ENST00000549525 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
COX6A1-202ENST00000549525 ZEB1P37275 1124 aaPredicted RBP9.67□□□□□ -0.86
COX6A1-202ENST00000549525 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
COX6A1-202ENST00000549525 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
COX6A1-202ENST00000549525 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
COX6A1-202ENST00000549525 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
COX6A1-202ENST00000549525 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
COX6A1-202ENST00000549525 ARHGEF12Q9NZN5 1544 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 ARHGAP9Q9BRR9 750 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 RRP7BPQ9NSQ0 103 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 KDM5CP41229 1560 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
COX6A1-202ENST00000549525 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
COX6A1-202ENST00000549525 ALDH1A1P00352 501 aa9.65□□□□□ -0.86
COX6A1-202ENST00000549525 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
COX6A1-202ENST00000549525 PNMA1Q8ND90 353 aa9.65□□□□□ -0.86
COX6A1-202ENST00000549525 GPSM3Q9Y4H4 160 aa9.65□□□□□ -0.86
COX6A1-202ENST00000549525 MAST1Q9Y2H9 1570 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms