RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
TROAP-206ENST00000547923 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.24
TROAP-206ENST00000547923 APBA3O96018 575 aa13.52□□□□□ -0.25
TROAP-206ENST00000547923 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
TROAP-206ENST00000547923 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.25
TROAP-206ENST00000547923 IL13P35225 146 aa13.51□□□□□ -0.25
TROAP-206ENST00000547923 SYTL4Q96C24 671 aaPredicted RBP13.51□□□□□ -0.25
TROAP-206ENST00000547923 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
TROAP-206ENST00000547923 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
TROAP-206ENST00000547923 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
TROAP-206ENST00000547923 HMOX1P09601 288 aa13.5□□□□□ -0.25
TROAP-206ENST00000547923 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
TROAP-206ENST00000547923 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
TROAP-206ENST00000547923 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
TROAP-206ENST00000547923 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
TROAP-206ENST00000547923 RALBP1Q15311 655 aa13.49□□□□□ -0.25
TROAP-206ENST00000547923 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
TROAP-206ENST00000547923 KCNQ2O43526 872 aa13.47□□□□□ -0.25
TROAP-206ENST00000547923 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
TROAP-206ENST00000547923 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
TROAP-206ENST00000547923 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
TROAP-206ENST00000547923 CYP27B1O15528 508 aa13.46□□□□□ -0.26
TROAP-206ENST00000547923 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.26
TROAP-206ENST00000547923 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.26
TROAP-206ENST00000547923 RGPD1P0DJD0 1748 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 SHANK3Q9BYB0 1731 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 BCL9O00512 1426 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
TROAP-206ENST00000547923 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
TROAP-206ENST00000547923 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 C1orf141Q5JVX7 400 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
TROAP-206ENST00000547923 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
TROAP-206ENST00000547923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
TROAP-206ENST00000547923 COL3A1P02461 1466 aaPredicted RBP13.45□□□□□ -0.26
TROAP-206ENST00000547923 SBF2Q86WG5 1849 aa13.44□□□□□ -0.26
TROAP-206ENST00000547923 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
TROAP-206ENST00000547923 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
TROAP-206ENST00000547923 KDRP35968 1356 aa13.43□□□□□ -0.26
TROAP-206ENST00000547923 PHKG2P15735 406 aa13.43□□□□□ -0.26
TROAP-206ENST00000547923 KCNA4P22459 653 aa13.43□□□□□ -0.26
TROAP-206ENST00000547923 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
TROAP-206ENST00000547923 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
TROAP-206ENST00000547923 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
TROAP-206ENST00000547923 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
TROAP-206ENST00000547923 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
TROAP-206ENST00000547923 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
TROAP-206ENST00000547923 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
TROAP-206ENST00000547923 NEFMP07197 916 aa13.4□□□□□ -0.26
TROAP-206ENST00000547923 PRKAR2BP31323 418 aa13.4□□□□□ -0.26
TROAP-206ENST00000547923 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
TROAP-206ENST00000547923 PLSCR1O15162 318 aa13.4□□□□□ -0.26
TROAP-206ENST00000547923 ANP32CO43423 234 aa13.4□□□□□ -0.26
TROAP-206ENST00000547923 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
TROAP-206ENST00000547923 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
TROAP-206ENST00000547923 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
TROAP-206ENST00000547923 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
TROAP-206ENST00000547923 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
TROAP-206ENST00000547923 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
TROAP-206ENST00000547923 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
TROAP-206ENST00000547923 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
TROAP-206ENST00000547923 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 NBPF14Q5TI25 921 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 FCHSD2O94868 740 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 CABP4P57796 275 aa13.37□□□□□ -0.27
TROAP-206ENST00000547923 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
TROAP-206ENST00000547923 PIGBQ92521 554 aa13.36□□□□□ -0.27
TROAP-206ENST00000547923 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
TROAP-206ENST00000547923 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
TROAP-206ENST00000547923 PROM2Q8N271 834 aa13.35□□□□□ -0.27
TROAP-206ENST00000547923 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
TROAP-206ENST00000547923 BTAF1O14981 1849 aa13.35□□□□□ -0.27
TROAP-206ENST00000547923 PNNQ9H307 717 aaKnown RBP13.34□□□□□ -0.27
TROAP-206ENST00000547923 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
TROAP-206ENST00000547923 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
TROAP-206ENST00000547923 TOGARAM1Q9Y4F4 1720 aa13.34□□□□□ -0.27
TROAP-206ENST00000547923 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
TROAP-206ENST00000547923 KCNQ4P56696 695 aa13.34□□□□□ -0.27
TROAP-206ENST00000547923 SMARCC1Q92922 1105 aaPredicted RBP13.34□□□□□ -0.27
TROAP-206ENST00000547923 KDM6AO15550 1401 aaPredicted RBP13.34□□□□□ -0.27
TROAP-206ENST00000547923 MAP3K5Q99683 1374 aa13.33□□□□□ -0.28
TROAP-206ENST00000547923 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.28
TROAP-206ENST00000547923 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
TROAP-206ENST00000547923 RTF1Q92541 710 aaKnown RBP13.33□□□□□ -0.28
TROAP-206ENST00000547923 ITGB4P16144 1822 aa13.32□□□□□ -0.28
TROAP-206ENST00000547923 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
TROAP-206ENST00000547923 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
TROAP-206ENST00000547923 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
TROAP-206ENST00000547923 ASAP1Q9ULH1 1129 aa13.32□□□□□ -0.28
TROAP-206ENST00000547923 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
TROAP-206ENST00000547923 TEFQ10587 303 aa13.31□□□□□ -0.28
TROAP-206ENST00000547923 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
TROAP-206ENST00000547923 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
TROAP-206ENST00000547923 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
TROAP-206ENST00000547923 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
TROAP-206ENST00000547923 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
TROAP-206ENST00000547923 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms