RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
SSH1-205ENST00000546812 IP6K1Q92551 441 aa13.25□□□□□ -0.29
SSH1-205ENST00000546812 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
SSH1-205ENST00000546812 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
SSH1-205ENST00000546812 DNAJC5GQ8N7S2 189 aa13.24□□□□□ -0.29
SSH1-205ENST00000546812 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
SSH1-205ENST00000546812 USP47Q96K76 1375 aa13.23□□□□□ -0.29
SSH1-205ENST00000546812 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
SSH1-205ENST00000546812 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
SSH1-205ENST00000546812 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.29
SSH1-205ENST00000546812 TOMM70O94826 608 aa13.2□□□□□ -0.3
SSH1-205ENST00000546812 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
SSH1-205ENST00000546812 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
SSH1-205ENST00000546812 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
SSH1-205ENST00000546812 TMC1Q8TDI8 760 aa13.19□□□□□ -0.3
SSH1-205ENST00000546812 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
SSH1-205ENST00000546812 LY75O60449 1722 aa13.19□□□□□ -0.3
SSH1-205ENST00000546812 SLC12A5Q9H2X9 1139 aa13.18□□□□□ -0.3
SSH1-205ENST00000546812 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
SSH1-205ENST00000546812 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
SSH1-205ENST00000546812 HOXC9P31274 260 aa13.17□□□□□ -0.3
SSH1-205ENST00000546812 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
SSH1-205ENST00000546812 CGNL1Q0VF96 1302 aa13.16□□□□□ -0.3
SSH1-205ENST00000546812 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
SSH1-205ENST00000546812 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
SSH1-205ENST00000546812 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
SSH1-205ENST00000546812 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 MEGF6O75095 1541 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 AMPHP49418 695 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 AK7Q96M32 723 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
SSH1-205ENST00000546812 LTN1O94822 1766 aa13.15□□□□□ -0.31
SSH1-205ENST00000546812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
SSH1-205ENST00000546812 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
SSH1-205ENST00000546812 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
SSH1-205ENST00000546812 PCNTO95613 3336 aa13.14□□□□□ -0.31
SSH1-205ENST00000546812 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 A0A1W2PP64 1363 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 PHF14O94880 888 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 RAPGEF4Q8WZA2 1011 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
SSH1-205ENST00000546812 COG3Q96JB2 828 aa13.13□□□□□ -0.31
SSH1-205ENST00000546812 FBLN1P23142 703 aa13.12□□□□□ -0.31
SSH1-205ENST00000546812 SSFA2P28290 1259 aa13.12□□□□□ -0.31
SSH1-205ENST00000546812 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
SSH1-205ENST00000546812 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
SSH1-205ENST00000546812 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
SSH1-205ENST00000546812 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
SSH1-205ENST00000546812 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
SSH1-205ENST00000546812 CAPN15O75808 1086 aa13.11□□□□□ -0.31
SSH1-205ENST00000546812 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
SSH1-205ENST00000546812 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
SSH1-205ENST00000546812 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
SSH1-205ENST00000546812 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
SSH1-205ENST00000546812 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
SSH1-205ENST00000546812 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
SSH1-205ENST00000546812 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
SSH1-205ENST00000546812 PRELPP51888 382 aa13.1□□□□□ -0.31
SSH1-205ENST00000546812 TGFB2P61812 414 aa13.09□□□□□ -0.31
SSH1-205ENST00000546812 HTRA3P83110 453 aa13.09□□□□□ -0.31
SSH1-205ENST00000546812 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
SSH1-205ENST00000546812 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
SSH1-205ENST00000546812 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
SSH1-205ENST00000546812 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
SSH1-205ENST00000546812 RTL1A6NKG5 1358 aa13.08□□□□□ -0.31
SSH1-205ENST00000546812 CYP27B1O15528 508 aa13.08□□□□□ -0.32
SSH1-205ENST00000546812 MMP10P09238 476 aa13.08□□□□□ -0.32
SSH1-205ENST00000546812 FSTL1Q12841 308 aa13.08□□□□□ -0.32
SSH1-205ENST00000546812 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
SSH1-205ENST00000546812 PIGBQ92521 554 aa13.08□□□□□ -0.32
SSH1-205ENST00000546812 C5P01031 1676 aa13.08□□□□□ -0.32
SSH1-205ENST00000546812 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 SIK1P57059 783 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 CARD11Q9BXL7 1154 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 C4BP0C0L5 1744 aa13.07□□□□□ -0.32
SSH1-205ENST00000546812 RRS1Q15050 365 aaKnown RBP13.06□□□□□ -0.32
SSH1-205ENST00000546812 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
SSH1-205ENST00000546812 GNPATO15228 680 aa13.05□□□□□ -0.32
SSH1-205ENST00000546812 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
SSH1-205ENST00000546812 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
SSH1-205ENST00000546812 FCHSD2O94868 740 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 DPEP1P16444 411 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 ITPK1Q13572 414 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
SSH1-205ENST00000546812 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
SSH1-205ENST00000546812 TMF1P82094 1093 aa13.03□□□□□ -0.32
SSH1-205ENST00000546812 TAF1LQ8IZX4 1826 aa13.03□□□□□ -0.32
SSH1-205ENST00000546812 KDM2BQ8NHM5 1336 aa13.03□□□□□ -0.32
SSH1-205ENST00000546812 FYB1O15117 783 aa13.02□□□□□ -0.33
SSH1-205ENST00000546812 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
SSH1-205ENST00000546812 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms