RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
CDK4-203ENST00000546489 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
CDK4-203ENST00000546489 ZCRB1Q8TBF4 217 aaKnown RBP17.6■□□□□ 0.41
CDK4-203ENST00000546489 BCL9O00512 1426 aa17.6■□□□□ 0.41
CDK4-203ENST00000546489 EP400Q96L91 3159 aa17.59■□□□□ 0.41
CDK4-203ENST00000546489 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
CDK4-203ENST00000546489 ANP32CO43423 234 aa17.59■□□□□ 0.41
CDK4-203ENST00000546489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK4-203ENST00000546489 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
CDK4-203ENST00000546489 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
CDK4-203ENST00000546489 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
CDK4-203ENST00000546489 FAM182BQ5T319 152 aa17.58■□□□□ 0.4
CDK4-203ENST00000546489 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
CDK4-203ENST00000546489 KAT6BQ8WYB5 2073 aa17.57■□□□□ 0.4
CDK4-203ENST00000546489 SOCS7O14512 581 aa17.57■□□□□ 0.4
CDK4-203ENST00000546489 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
CDK4-203ENST00000546489 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
CDK4-203ENST00000546489 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
CDK4-203ENST00000546489 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
CDK4-203ENST00000546489 HMOX1P09601 288 aa17.56■□□□□ 0.4
CDK4-203ENST00000546489 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
CDK4-203ENST00000546489 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
CDK4-203ENST00000546489 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
CDK4-203ENST00000546489 ITGB4P16144 1822 aa17.54■□□□□ 0.4
CDK4-203ENST00000546489 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
CDK4-203ENST00000546489 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK4-203ENST00000546489 CYP27B1O15528 508 aa17.53■□□□□ 0.4
CDK4-203ENST00000546489 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
CDK4-203ENST00000546489 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDK4-203ENST00000546489 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
CDK4-203ENST00000546489 SCN11AQ9UI33 1791 aa17.53■□□□□ 0.4
CDK4-203ENST00000546489 CCDC125Q86Z20 511 aa17.52■□□□□ 0.4
CDK4-203ENST00000546489 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
CDK4-203ENST00000546489 BTAF1O14981 1849 aa17.51■□□□□ 0.39
CDK4-203ENST00000546489 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
CDK4-203ENST00000546489 FCHSD2O94868 740 aa17.51■□□□□ 0.39
CDK4-203ENST00000546489 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
CDK4-203ENST00000546489 PHKG2P15735 406 aa17.5■□□□□ 0.39
CDK4-203ENST00000546489 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
CDK4-203ENST00000546489 RGPD3A6NKT7 1758 aaPredicted RBP17.5■□□□□ 0.39
CDK4-203ENST00000546489 RGPD4Q7Z3J3 1758 aa17.5■□□□□ 0.39
CDK4-203ENST00000546489 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
CDK4-203ENST00000546489 TRIM37O94972 964 aa17.48■□□□□ 0.39
CDK4-203ENST00000546489 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
CDK4-203ENST00000546489 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
CDK4-203ENST00000546489 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
CDK4-203ENST00000546489 ZNF530Q6P9A1 599 aaPredicted RBP17.47■□□□□ 0.39
CDK4-203ENST00000546489 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
CDK4-203ENST00000546489 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
CDK4-203ENST00000546489 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
CDK4-203ENST00000546489 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
CDK4-203ENST00000546489 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
CDK4-203ENST00000546489 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
CDK4-203ENST00000546489 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
CDK4-203ENST00000546489 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
CDK4-203ENST00000546489 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
CDK4-203ENST00000546489 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
CDK4-203ENST00000546489 LY75O60449 1722 aa17.44■□□□□ 0.38
CDK4-203ENST00000546489 KCNQ2O43526 872 aa17.44■□□□□ 0.38
CDK4-203ENST00000546489 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDK4-203ENST00000546489 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
CDK4-203ENST00000546489 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
CDK4-203ENST00000546489 KDM6AO15550 1401 aaPredicted RBP17.44■□□□□ 0.38
CDK4-203ENST00000546489 RREB1Q92766 1687 aa17.43■□□□□ 0.38
CDK4-203ENST00000546489 DCAF5Q96JK2 942 aa17.43■□□□□ 0.38
CDK4-203ENST00000546489 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
CDK4-203ENST00000546489 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
CDK4-203ENST00000546489 BAG6P46379 1132 aa17.42■□□□□ 0.38
CDK4-203ENST00000546489 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
CDK4-203ENST00000546489 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
CDK4-203ENST00000546489 NEFMP07197 916 aa17.41■□□□□ 0.38
CDK4-203ENST00000546489 PNISRQ8TF01 805 aaKnown RBP17.41■□□□□ 0.38
CDK4-203ENST00000546489 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 MRC1P22897 1456 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 APBA3O96018 575 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
CDK4-203ENST00000546489 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
CDK4-203ENST00000546489 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
CDK4-203ENST00000546489 PLSCR1O15162 318 aa17.39■□□□□ 0.37
CDK4-203ENST00000546489 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
CDK4-203ENST00000546489 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CDK4-203ENST00000546489 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
CDK4-203ENST00000546489 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
CDK4-203ENST00000546489 EN1Q05925 392 aaPredicted RBP17.37■□□□□ 0.37
CDK4-203ENST00000546489 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
CDK4-203ENST00000546489 CAMKK2Q96RR4 588 aa17.37■□□□□ 0.37
CDK4-203ENST00000546489 CCER2I3L3R5 266 aa17.36■□□□□ 0.37
CDK4-203ENST00000546489 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
CDK4-203ENST00000546489 PIGBQ92521 554 aa17.36■□□□□ 0.37
CDK4-203ENST00000546489 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
CDK4-203ENST00000546489 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
CDK4-203ENST00000546489 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
CDK4-203ENST00000546489 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
CDK4-203ENST00000546489 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
CDK4-203ENST00000546489 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
CDK4-203ENST00000546489 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
CDK4-203ENST00000546489 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
CDK4-203ENST00000546489 CABP4P57796 275 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms