RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 PLSCR1O15162 318 aa16.43■□□□□ 0.22
UBC-214ENST00000546271 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
UBC-214ENST00000546271 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
UBC-214ENST00000546271 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
UBC-214ENST00000546271 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
UBC-214ENST00000546271 KCNQ2O43526 872 aa16.42■□□□□ 0.22
UBC-214ENST00000546271 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
UBC-214ENST00000546271 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
UBC-214ENST00000546271 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
UBC-214ENST00000546271 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
UBC-214ENST00000546271 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
UBC-214ENST00000546271 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
UBC-214ENST00000546271 LY75O60449 1722 aa16.39■□□□□ 0.21
UBC-214ENST00000546271 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
UBC-214ENST00000546271 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
UBC-214ENST00000546271 ZCRB1Q8TBF4 217 aaKnown RBP16.39■□□□□ 0.21
UBC-214ENST00000546271 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
UBC-214ENST00000546271 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
UBC-214ENST00000546271 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
UBC-214ENST00000546271 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
UBC-214ENST00000546271 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
UBC-214ENST00000546271 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
UBC-214ENST00000546271 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
UBC-214ENST00000546271 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
UBC-214ENST00000546271 QSER1Q2KHR3 1735 aa16.36■□□□□ 0.21
UBC-214ENST00000546271 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
UBC-214ENST00000546271 PROM2Q8N271 834 aa16.36■□□□□ 0.21
UBC-214ENST00000546271 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
UBC-214ENST00000546271 EYA1Q99502 592 aa16.36■□□□□ 0.21
UBC-214ENST00000546271 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
UBC-214ENST00000546271 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
UBC-214ENST00000546271 ITGB4P16144 1822 aa16.35■□□□□ 0.21
UBC-214ENST00000546271 C5P01031 1676 aa16.33■□□□□ 0.2
UBC-214ENST00000546271 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
UBC-214ENST00000546271 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
UBC-214ENST00000546271 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
UBC-214ENST00000546271 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
UBC-214ENST00000546271 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
UBC-214ENST00000546271 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
UBC-214ENST00000546271 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
UBC-214ENST00000546271 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
UBC-214ENST00000546271 CYP27B1O15528 508 aa16.29■□□□□ 0.2
UBC-214ENST00000546271 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
UBC-214ENST00000546271 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
UBC-214ENST00000546271 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
UBC-214ENST00000546271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBC-214ENST00000546271 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
UBC-214ENST00000546271 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
UBC-214ENST00000546271 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
UBC-214ENST00000546271 MTHFSP49914 203 aa16.26■□□□□ 0.19
UBC-214ENST00000546271 IL13P35225 146 aa16.25■□□□□ 0.19
UBC-214ENST00000546271 KCNQ4P56696 695 aa16.25■□□□□ 0.19
UBC-214ENST00000546271 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
UBC-214ENST00000546271 SLC27A3Q5K4L6 730 aa16.25■□□□□ 0.19
UBC-214ENST00000546271 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
UBC-214ENST00000546271 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
UBC-214ENST00000546271 PHKG2P15735 406 aa16.23■□□□□ 0.19
UBC-214ENST00000546271 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
UBC-214ENST00000546271 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
UBC-214ENST00000546271 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
UBC-214ENST00000546271 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
UBC-214ENST00000546271 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
UBC-214ENST00000546271 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
UBC-214ENST00000546271 C4BP0C0L5 1744 aa16.22■□□□□ 0.19
UBC-214ENST00000546271 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
UBC-214ENST00000546271 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
UBC-214ENST00000546271 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
UBC-214ENST00000546271 PTGER2P43116 358 aa16.2■□□□□ 0.18
UBC-214ENST00000546271 PLEKHO1Q53GL0 409 aaPredicted RBP16.2■□□□□ 0.18
UBC-214ENST00000546271 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
UBC-214ENST00000546271 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
UBC-214ENST00000546271 KDRP35968 1356 aa16.2■□□□□ 0.18
UBC-214ENST00000546271 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
UBC-214ENST00000546271 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
UBC-214ENST00000546271 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
UBC-214ENST00000546271 MSH5O43196 834 aa16.18■□□□□ 0.18
UBC-214ENST00000546271 DIAPH1O60610 1272 aaKnown RBP16.18■□□□□ 0.18
UBC-214ENST00000546271 PIGBQ92521 554 aa16.18■□□□□ 0.18
UBC-214ENST00000546271 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
UBC-214ENST00000546271 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
UBC-214ENST00000546271 FHDC1Q9C0D6 1143 aaPredicted RBP16.17■□□□□ 0.18
UBC-214ENST00000546271 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
UBC-214ENST00000546271 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
UBC-214ENST00000546271 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
UBC-214ENST00000546271 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
UBC-214ENST00000546271 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
UBC-214ENST00000546271 HMOX1P09601 288 aa16.15■□□□□ 0.18
UBC-214ENST00000546271 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
UBC-214ENST00000546271 ARXQ96QS3 562 aa16.15■□□□□ 0.18
UBC-214ENST00000546271 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
UBC-214ENST00000546271 SCN11AQ9UI33 1791 aa16.14■□□□□ 0.17
UBC-214ENST00000546271 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
UBC-214ENST00000546271 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
UBC-214ENST00000546271 POLD1P28340 1107 aa16.13■□□□□ 0.17
UBC-214ENST00000546271 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
UBC-214ENST00000546271 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
UBC-214ENST00000546271 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
UBC-214ENST00000546271 PPP2R1AP30153 589 aa16.12■□□□□ 0.17
UBC-214ENST00000546271 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
UBC-214ENST00000546271 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms