RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 MAP3K19Q56UN5 1328 aa22.8■■□□□ 1.24
TNFAIP1-202ENST00000544907 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
TNFAIP1-202ENST00000544907 TSPYL6Q8N831 410 aa22.8■■□□□ 1.24
TNFAIP1-202ENST00000544907 PIK3C2AO00443 1686 aa22.79■■□□□ 1.24
TNFAIP1-202ENST00000544907 HSP90AB2PQ58FF8 381 aa22.79■■□□□ 1.24
TNFAIP1-202ENST00000544907 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
TNFAIP1-202ENST00000544907 SLAIN2Q9P270 581 aa22.78■■□□□ 1.24
TNFAIP1-202ENST00000544907 RGPD8O14715 1765 aaPredicted RBP22.78■■□□□ 1.24
TNFAIP1-202ENST00000544907 HTATSF1O43719 755 aaKnown RBP22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 AEBP1Q8IUX7 1158 aa22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 GCC1Q96CN9 775 aa22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 NUCB1Q02818 461 aa22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 C8orf58Q8NAV2 365 aa22.77■■□□□ 1.24
TNFAIP1-202ENST00000544907 CRB1P82279 1406 aa22.75■■□□□ 1.23
TNFAIP1-202ENST00000544907 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 NBR1Q14596 966 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 RTL1A6NKG5 1358 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 GAS2L2Q8NHY3 880 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 TBC1D32Q96NH3 1257 aa22.74■■□□□ 1.23
TNFAIP1-202ENST00000544907 PIP4K2BP78356 416 aa22.73■■□□□ 1.23
TNFAIP1-202ENST00000544907 BECN1Q14457 450 aa22.73■■□□□ 1.23
TNFAIP1-202ENST00000544907 PTPRCP08575 1304 aa22.72■■□□□ 1.23
TNFAIP1-202ENST00000544907 KIF1AQ12756 1690 aa22.72■■□□□ 1.23
TNFAIP1-202ENST00000544907 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
TNFAIP1-202ENST00000544907 INTS3Q68E01 1043 aaKnown RBP22.71■■□□□ 1.23
TNFAIP1-202ENST00000544907 SOS1Q07889 1333 aaPredicted RBP22.71■■□□□ 1.23
TNFAIP1-202ENST00000544907 AMPHP49418 695 aa22.71■■□□□ 1.23
TNFAIP1-202ENST00000544907 SEC24BO95487 1268 aa22.7■■□□□ 1.22
TNFAIP1-202ENST00000544907 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 BRINP3Q76B58 766 aa22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 MARF1Q9Y4F3 1742 aaKnown RBP22.69■■□□□ 1.22
TNFAIP1-202ENST00000544907 NLRP6P59044 892 aa22.68■■□□□ 1.22
TNFAIP1-202ENST00000544907 RTF1Q92541 710 aaKnown RBP22.68■■□□□ 1.22
TNFAIP1-202ENST00000544907 EYA1Q99502 592 aa22.67■■□□□ 1.22
TNFAIP1-202ENST00000544907 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
TNFAIP1-202ENST00000544907 ELL2O00472 640 aaPredicted RBP22.66■■□□□ 1.22
TNFAIP1-202ENST00000544907 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
TNFAIP1-202ENST00000544907 HOXC9P31274 260 aa22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 MTHFSDQ2M296 383 aaKnown RBP22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 ILDR1Q86SU0 546 aaPredicted RBP22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 RGS12O14924 1447 aa22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 NHSL1Q5SYE7 1610 aa22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 BMP2KLQ5H9B9 411 aa22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 MCM10Q7L590 875 aa22.65■■□□□ 1.22
TNFAIP1-202ENST00000544907 EIF5BO60841 1220 aaKnown RBP22.64■■□□□ 1.21
TNFAIP1-202ENST00000544907 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
TNFAIP1-202ENST00000544907 AHDC1Q5TGY3 1603 aaPredicted RBP22.62■■□□□ 1.21
TNFAIP1-202ENST00000544907 PHRF1Q9P1Y6 1649 aaKnown RBP22.62■■□□□ 1.21
TNFAIP1-202ENST00000544907 DEKP35659 375 aaKnown RBP22.62■■□□□ 1.21
TNFAIP1-202ENST00000544907 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
TNFAIP1-202ENST00000544907 SIRT2Q8IXJ6 389 aa22.61■■□□□ 1.21
TNFAIP1-202ENST00000544907 RPAP2Q8IXW5 612 aaPredicted RBP22.61■■□□□ 1.21
TNFAIP1-202ENST00000544907 NPHP3Q7Z494 1330 aa22.6■■□□□ 1.21
TNFAIP1-202ENST00000544907 PHLPP1O60346 1717 aa22.6■■□□□ 1.21
TNFAIP1-202ENST00000544907 FOXO3O43524 673 aa22.59■■□□□ 1.21
TNFAIP1-202ENST00000544907 GNAT3A8MTJ3 354 aa22.58■■□□□ 1.21
TNFAIP1-202ENST00000544907 SLC4A3P48751 1232 aa22.58■■□□□ 1.21
TNFAIP1-202ENST00000544907 DCTPP1Q9H773 170 aa22.58■■□□□ 1.21
TNFAIP1-202ENST00000544907 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
TNFAIP1-202ENST00000544907 NFAT5O94916 1531 aa22.58■■□□□ 1.21
TNFAIP1-202ENST00000544907 SOX12O15370 315 aa22.58■■□□□ 1.2
TNFAIP1-202ENST00000544907 KCNH5Q8NCM2 988 aa22.58■■□□□ 1.2
TNFAIP1-202ENST00000544907 LNPKQ9C0E8 428 aa22.58■■□□□ 1.2
TNFAIP1-202ENST00000544907 ANKRD44Q8N8A2 993 aa22.57■■□□□ 1.2
TNFAIP1-202ENST00000544907 IP6K1Q92551 441 aa22.57■■□□□ 1.2
TNFAIP1-202ENST00000544907 DDX17Q92841 729 aaKnown RBP22.57■■□□□ 1.2
TNFAIP1-202ENST00000544907 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
TNFAIP1-202ENST00000544907 MAP3K5Q99683 1374 aa22.57■■□□□ 1.2
TNFAIP1-202ENST00000544907 ATP10DQ9P241 1426 aa22.56■■□□□ 1.2
TNFAIP1-202ENST00000544907 NFKBIBQ15653 356 aa22.56■■□□□ 1.2
TNFAIP1-202ENST00000544907 ANKRD45Q5TZF3 282 aa22.56■■□□□ 1.2
TNFAIP1-202ENST00000544907 PXDNQ92626 1479 aa22.55■■□□□ 1.2
TNFAIP1-202ENST00000544907 RBM25P49756 843 aaKnown RBP22.55■■□□□ 1.2
TNFAIP1-202ENST00000544907 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
TNFAIP1-202ENST00000544907 PSME1Q06323 249 aa22.55■■□□□ 1.2
TNFAIP1-202ENST00000544907 COL16A1Q07092 1604 aaPredicted RBP22.54■■□□□ 1.2
TNFAIP1-202ENST00000544907 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
TNFAIP1-202ENST00000544907 SLC4A2P04920 1241 aa22.53■■□□□ 1.2
TNFAIP1-202ENST00000544907 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
TNFAIP1-202ENST00000544907 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
TNFAIP1-202ENST00000544907 C1orf115Q9H7X2 142 aa22.52■■□□□ 1.2
TNFAIP1-202ENST00000544907 SOS2Q07890 1332 aaPredicted RBP22.52■■□□□ 1.2
TNFAIP1-202ENST00000544907 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
TNFAIP1-202ENST00000544907 TRPM3Q9HCF6 1732 aaPredicted RBP22.52■■□□□ 1.2
TNFAIP1-202ENST00000544907 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
TNFAIP1-202ENST00000544907 TAF7Q15545 349 aaPredicted RBP22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 STK31Q9BXU1 1019 aa22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 TBC1D2Q9BYX2 928 aa22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 SLIT3O75094 1523 aa22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 NCAPD2Q15021 1401 aa22.5■■□□□ 1.19
TNFAIP1-202ENST00000544907 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
TNFAIP1-202ENST00000544907 PXDNLA1KZ92 1463 aa22.49■■□□□ 1.19
TNFAIP1-202ENST00000544907 LTN1O94822 1766 aa22.49■■□□□ 1.19
TNFAIP1-202ENST00000544907 HSPA1LP34931 641 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms