RNA–Protein interactions for RNA: ENST00000544481.1

UBC-212, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-212ENST00000544481 PNPLA7Q6ZV29 1317 aa18.09■□□□□ 0.49
UBC-212ENST00000544481 AMPHP49418 695 aa18.09■□□□□ 0.49
UBC-212ENST00000544481 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
UBC-212ENST00000544481 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
UBC-212ENST00000544481 NBPF6Q5VWK0 638 aa18.07■□□□□ 0.48
UBC-212ENST00000544481 NBPF4Q96M43 638 aa18.07■□□□□ 0.48
UBC-212ENST00000544481 LY75O60449 1722 aa18.06■□□□□ 0.48
UBC-212ENST00000544481 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
UBC-212ENST00000544481 CHD4Q14839 1912 aa18.06■□□□□ 0.48
UBC-212ENST00000544481 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
UBC-212ENST00000544481 FYB1O15117 783 aa18.05■□□□□ 0.48
UBC-212ENST00000544481 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
UBC-212ENST00000544481 SLC27A3Q5K4L6 730 aa18.04■□□□□ 0.48
UBC-212ENST00000544481 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
UBC-212ENST00000544481 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
UBC-212ENST00000544481 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
UBC-212ENST00000544481 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
UBC-212ENST00000544481 GPR162Q16538 588 aa18.01■□□□□ 0.47
UBC-212ENST00000544481 HSP90AB2PQ58FF8 381 aa18.01■□□□□ 0.47
UBC-212ENST00000544481 CCNL1Q9UK58 526 aaPredicted RBP18.01■□□□□ 0.47
UBC-212ENST00000544481 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
UBC-212ENST00000544481 USP47Q96K76 1375 aa18■□□□□ 0.47
UBC-212ENST00000544481 KIF20BQ96Q89 1820 aa18■□□□□ 0.47
UBC-212ENST00000544481 MSL1Q68DK7 614 aa17.99■□□□□ 0.47
UBC-212ENST00000544481 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
UBC-212ENST00000544481 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
UBC-212ENST00000544481 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
UBC-212ENST00000544481 MSH5O43196 834 aa17.98■□□□□ 0.47
UBC-212ENST00000544481 POLD1P28340 1107 aa17.98■□□□□ 0.47
UBC-212ENST00000544481 TMF1P82094 1093 aa17.97■□□□□ 0.47
UBC-212ENST00000544481 CARD14Q9BXL6 1004 aa17.97■□□□□ 0.47
UBC-212ENST00000544481 TOGARAM1Q9Y4F4 1720 aa17.97■□□□□ 0.47
UBC-212ENST00000544481 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
UBC-212ENST00000544481 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
UBC-212ENST00000544481 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
UBC-212ENST00000544481 C5P01031 1676 aa17.96■□□□□ 0.47
UBC-212ENST00000544481 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
UBC-212ENST00000544481 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
UBC-212ENST00000544481 INSRP06213 1382 aa17.94■□□□□ 0.46
UBC-212ENST00000544481 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
UBC-212ENST00000544481 CYP27B1O15528 508 aa17.94■□□□□ 0.46
UBC-212ENST00000544481 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.464e-14■□□□□ 10.8
UBC-212ENST00000544481 MPRIPQ6WCQ1 1025 aa17.94■□□□□ 0.46
UBC-212ENST00000544481 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
UBC-212ENST00000544481 ITGB4P16144 1822 aa17.93■□□□□ 0.46
UBC-212ENST00000544481 FLT4P35916 1363 aa17.92■□□□□ 0.46
UBC-212ENST00000544481 NSD3Q9BZ95 1437 aa17.92■□□□□ 0.46
UBC-212ENST00000544481 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
UBC-212ENST00000544481 C1QTNF8P60827 252 aa17.91■□□□□ 0.46
UBC-212ENST00000544481 CGNL1Q0VF96 1302 aa17.91■□□□□ 0.46
UBC-212ENST00000544481 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
UBC-212ENST00000544481 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
UBC-212ENST00000544481 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
UBC-212ENST00000544481 PPM1GO15355 546 aaPredicted RBP17.9■□□□□ 0.46
UBC-212ENST00000544481 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
UBC-212ENST00000544481 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.46
UBC-212ENST00000544481 C4BP0C0L5 1744 aa17.88■□□□□ 0.45
UBC-212ENST00000544481 PIGBQ92521 554 aa17.87■□□□□ 0.45
UBC-212ENST00000544481 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
UBC-212ENST00000544481 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
UBC-212ENST00000544481 PHF14O94880 888 aa17.86■□□□□ 0.45
UBC-212ENST00000544481 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
UBC-212ENST00000544481 UBR3Q6ZT12 1888 aa17.86■□□□□ 0.45
UBC-212ENST00000544481 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
UBC-212ENST00000544481 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
UBC-212ENST00000544481 EYA1Q99502 592 aa17.84■□□□□ 0.45
UBC-212ENST00000544481 CDCA8Q53HL2 280 aa17.83■□□□□ 0.44
UBC-212ENST00000544481 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
UBC-212ENST00000544481 POLR3GLQ9BT43 218 aa17.83■□□□□ 0.44
UBC-212ENST00000544481 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
UBC-212ENST00000544481 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
UBC-212ENST00000544481 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
UBC-212ENST00000544481 AK7Q96M32 723 aa17.82■□□□□ 0.44
UBC-212ENST00000544481 ASAP1Q9ULH1 1129 aa17.82■□□□□ 0.44
UBC-212ENST00000544481 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
UBC-212ENST00000544481 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
UBC-212ENST00000544481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
UBC-212ENST00000544481 ITPK1Q13572 414 aa17.81■□□□□ 0.44
UBC-212ENST00000544481 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
UBC-212ENST00000544481 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
UBC-212ENST00000544481 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
UBC-212ENST00000544481 SIK1P57059 783 aa17.8■□□□□ 0.44
UBC-212ENST00000544481 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
UBC-212ENST00000544481 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
UBC-212ENST00000544481 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
UBC-212ENST00000544481 CD2APQ9Y5K6 639 aa17.79■□□□□ 0.44
UBC-212ENST00000544481 PHKG2P15735 406 aa17.78■□□□□ 0.44
UBC-212ENST00000544481 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
UBC-212ENST00000544481 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
UBC-212ENST00000544481 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
UBC-212ENST00000544481 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
UBC-212ENST00000544481 IGSF1Q8N6C5 1336 aa17.76■□□□□ 0.43
UBC-212ENST00000544481 GNPATO15228 680 aa17.76■□□□□ 0.43
UBC-212ENST00000544481 ZNF526Q8TF50 670 aaPredicted RBP17.76■□□□□ 0.43
UBC-212ENST00000544481 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
UBC-212ENST00000544481 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
UBC-212ENST00000544481 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
UBC-212ENST00000544481 IFNL2Q8IZJ0 200 aa17.74■□□□□ 0.43
UBC-212ENST00000544481 SSFA2P28290 1259 aa17.73■□□□□ 0.43
UBC-212ENST00000544481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms