RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
SMG8-202ENST00000543872 ERICH4A6NGS2 130 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 FIBPO43427 364 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 FBLN1P23142 703 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 AFAP1Q8N556 730 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 MAST1Q9Y2H9 1570 aa15.27■□□□□ 0.03
SMG8-202ENST00000543872 ABCA8O94911 1581 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 KIF3BO15066 747 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 FEZ1Q99689 392 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
SMG8-202ENST00000543872 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 DRC7Q8IY82 874 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 CHMP3Q9Y3E7 222 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 AP5Z1O43299 807 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
SMG8-202ENST00000543872 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
SMG8-202ENST00000543872 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
SMG8-202ENST00000543872 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
SMG8-202ENST00000543872 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
SMG8-202ENST00000543872 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
SMG8-202ENST00000543872 MX1P20591 662 aa15.25■□□□□ 0.03
SMG8-202ENST00000543872 PTGS1P23219 599 aa15.25■□□□□ 0.03
SMG8-202ENST00000543872 TEX2Q8IWB9 1127 aa15.25■□□□□ 0.03
SMG8-202ENST00000543872 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
SMG8-202ENST00000543872 DUOX2Q9NRD8 1548 aa15.24■□□□□ 0.03
SMG8-202ENST00000543872 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
SMG8-202ENST00000543872 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
SMG8-202ENST00000543872 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 SRCIN1Q9C0H9 1055 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
SMG8-202ENST00000543872 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
SMG8-202ENST00000543872 C8orf58Q8NAV2 365 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 RILPL2Q969X0 211 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 GOLGA6L6A8MZA4 724 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 MCCP23508 829 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 CTNNA3Q9UI47 895 aa15.23■□□□□ 0.03
SMG8-202ENST00000543872 LRMPQ12912 555 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMG8-202ENST00000543872 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
SMG8-202ENST00000543872 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 MCM2P49736 904 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 ZBTB9Q96C00 473 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
SMG8-202ENST00000543872 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
SMG8-202ENST00000543872 ABCC4O15439 1325 aa15.21■□□□□ 0.03
SMG8-202ENST00000543872 TNNT1P13805 278 aa15.21■□□□□ 0.03
SMG8-202ENST00000543872 CUL4AQ13619 759 aa15.21■□□□□ 0.03
SMG8-202ENST00000543872 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
SMG8-202ENST00000543872 STK26Q9P289 416 aa15.21■□□□□ 0.03
SMG8-202ENST00000543872 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 CCDC186Q7Z3E2 898 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 ANKRD44Q8N8A2 993 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 RGS22Q8NE09 1264 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 EVC2Q86UK5 1308 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 NPHP1O15259 732 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 GABPB1Q06547 395 aaPredicted RBP15.2■□□□□ 0.02
SMG8-202ENST00000543872 CLTCL1P53675 1640 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 MED14O60244 1454 aa15.2■□□□□ 0.02
SMG8-202ENST00000543872 CCDC112Q8NEF3 446 aa15.19■□□□□ 0.02
SMG8-202ENST00000543872 GNAI1P63096 354 aa15.19■□□□□ 0.02
SMG8-202ENST00000543872 UGGT1Q9NYU2 1555 aa15.19■□□□□ 0.02
SMG8-202ENST00000543872 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
SMG8-202ENST00000543872 DDX41Q9UJV9 622 aaKnown RBP15.19■□□□□ 0.02
SMG8-202ENST00000543872 CCDC66A2RUB6 948 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
SMG8-202ENST00000543872 DCTN1Q14203 1278 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 INTS4Q96HW7 963 aaKnown RBP15.18■□□□□ 0.02
SMG8-202ENST00000543872 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 UBE2HP62256 183 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 CAMK4Q16566 473 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 TPD52L1Q16890 204 aaPredicted RBP15.18■□□□□ 0.02
SMG8-202ENST00000543872 NRBP1Q9UHY1 535 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 TPM3P06753 285 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 MEIS3Q99687 375 aa15.18■□□□□ 0.02
SMG8-202ENST00000543872 FYB1O15117 783 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 PDE1AP54750 535 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 TCHHQ07283 1943 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 FCHSD2O94868 740 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 TERF2Q15554 542 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 TIGD1Q96MW7 591 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 TRPM2O94759 1503 aa15.17■□□□□ 0.02
SMG8-202ENST00000543872 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
SMG8-202ENST00000543872 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
SMG8-202ENST00000543872 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 CHRM1P11229 460 aaPredicted RBP15.16■□□□□ 0.02
SMG8-202ENST00000543872 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms