RNA–Protein interactions for RNA: ENST00000543419.5

ECHDC2-224, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 555 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-224ENST00000543419 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
ECHDC2-224ENST00000543419 TESK2Q96S53 571 aa11.93□□□□□ -0.5
ECHDC2-224ENST00000543419 RGPD2P0DJD1 1756 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 FBLN1P23142 703 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
ECHDC2-224ENST00000543419 POLD1P28340 1107 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
ECHDC2-224ENST00000543419 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
ECHDC2-224ENST00000543419 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 LTV1Q96GA3 475 aaPredicted RBP11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 ADCY9O60503 1353 aa11.89□□□□□ -0.51
ECHDC2-224ENST00000543419 CCNL1Q9UK58 526 aaPredicted RBP11.88□□□□□ -0.51
ECHDC2-224ENST00000543419 CGNL1Q0VF96 1302 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 TAF1LQ8IZX4 1826 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 C5P01031 1676 aa11.87□□□□□ -0.51
ECHDC2-224ENST00000543419 FYB1O15117 783 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 COG3Q96JB2 828 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 USP47Q96K76 1375 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 NCAPD2Q15021 1401 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
ECHDC2-224ENST00000543419 AMPHP49418 695 aa11.85□□□□□ -0.51
ECHDC2-224ENST00000543419 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
ECHDC2-224ENST00000543419 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 CYP27B1O15528 508 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
ECHDC2-224ENST00000543419 INSRP06213 1382 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 USHBP1Q8N6Y0 703 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 UBR3Q6ZT12 1888 aa11.83□□□□□ -0.52
ECHDC2-224ENST00000543419 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 PKD1L3Q7Z443 1732 aa11.82□□□□□ -0.52
ECHDC2-224ENST00000543419 ITGB4P16144 1822 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
ECHDC2-224ENST00000543419 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
ECHDC2-224ENST00000543419 FLT4P35916 1363 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 MSH5O43196 834 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 PIGBQ92521 554 aa11.79□□□□□ -0.52
ECHDC2-224ENST00000543419 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 HSPA6P17066 643 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 HMGB2P26583 209 aaKnown RBP11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
ECHDC2-224ENST00000543419 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.52
ECHDC2-224ENST00000543419 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
ECHDC2-224ENST00000543419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF3CO14782 793 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 SSFA2P28290 1259 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
ECHDC2-224ENST00000543419 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 SIK1P57059 783 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 ITPK1Q13572 414 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.534e-7■□□□□ 10.6
ECHDC2-224ENST00000543419 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
ECHDC2-224ENST00000543419 AK7Q96M32 723 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 KDRP35968 1356 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
ECHDC2-224ENST00000543419 TMF1P82094 1093 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 ZNF831Q5JPB2 1677 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 WASHC2AQ641Q2 1341 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 EYA1Q99502 592 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
ECHDC2-224ENST00000543419 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 PHF14O94880 888 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 ATG3Q9NT62 314 aa11.72□□□□□ -0.53
ECHDC2-224ENST00000543419 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms