RNA–Protein interactions for RNA: ENST00000543419.5

ECHDC2-224, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-224ENST00000543419 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
ECHDC2-224ENST00000543419 ABCC9O60706 1549 aa19.6■□□□□ 0.73
ECHDC2-224ENST00000543419 CCDC180Q9P1Z9 1646 aa19.43■□□□□ 0.7
ECHDC2-224ENST00000543419 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
ECHDC2-224ENST00000543419 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
ECHDC2-224ENST00000543419 NACADO15069 1562 aa18.42■□□□□ 0.54
ECHDC2-224ENST00000543419 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.517e-7■□□□□ 10.8
ECHDC2-224ENST00000543419 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
ECHDC2-224ENST00000543419 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
ECHDC2-224ENST00000543419 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
ECHDC2-224ENST00000543419 DCAF8L2P0C7V8 631 aa18.11■□□□□ 0.49
ECHDC2-224ENST00000543419 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
ECHDC2-224ENST00000543419 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
ECHDC2-224ENST00000543419 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
ECHDC2-224ENST00000543419 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
ECHDC2-224ENST00000543419 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
ECHDC2-224ENST00000543419 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
ECHDC2-224ENST00000543419 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
ECHDC2-224ENST00000543419 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
ECHDC2-224ENST00000543419 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
ECHDC2-224ENST00000543419 CUX2O14529 1486 aa17.02■□□□□ 0.32
ECHDC2-224ENST00000543419 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
ECHDC2-224ENST00000543419 HMGXB3Q12766 1538 aa16.88■□□□□ 0.29
ECHDC2-224ENST00000543419 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
ECHDC2-224ENST00000543419 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
ECHDC2-224ENST00000543419 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
ECHDC2-224ENST00000543419 NESP48681 1621 aa16.81■□□□□ 0.28
ECHDC2-224ENST00000543419 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
ECHDC2-224ENST00000543419 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
ECHDC2-224ENST00000543419 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
ECHDC2-224ENST00000543419 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
ECHDC2-224ENST00000543419 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
ECHDC2-224ENST00000543419 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
ECHDC2-224ENST00000543419 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
ECHDC2-224ENST00000543419 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
ECHDC2-224ENST00000543419 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
ECHDC2-224ENST00000543419 WDR62O43379 1518 aa16.43■□□□□ 0.22
ECHDC2-224ENST00000543419 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
ECHDC2-224ENST00000543419 WIZO95785 1651 aa16.37■□□□□ 0.21
ECHDC2-224ENST00000543419 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
ECHDC2-224ENST00000543419 CFTRP13569 1480 aa16.29■□□□□ 0.2
ECHDC2-224ENST00000543419 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
ECHDC2-224ENST00000543419 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
ECHDC2-224ENST00000543419 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
ECHDC2-224ENST00000543419 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
ECHDC2-224ENST00000543419 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
ECHDC2-224ENST00000543419 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ECHDC2-224ENST00000543419 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
ECHDC2-224ENST00000543419 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
ECHDC2-224ENST00000543419 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
ECHDC2-224ENST00000543419 IFT140Q96RY7 1462 aa16■□□□□ 0.15
ECHDC2-224ENST00000543419 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
ECHDC2-224ENST00000543419 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
ECHDC2-224ENST00000543419 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
ECHDC2-224ENST00000543419 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
ECHDC2-224ENST00000543419 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
ECHDC2-224ENST00000543419 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
ECHDC2-224ENST00000543419 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
ECHDC2-224ENST00000543419 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
ECHDC2-224ENST00000543419 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
ECHDC2-224ENST00000543419 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.123e-6■■■■□ 20.3
ECHDC2-224ENST00000543419 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
ECHDC2-224ENST00000543419 CHD1O14646 1710 aa15.79■□□□□ 0.12
ECHDC2-224ENST00000543419 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
ECHDC2-224ENST00000543419 CYB5RLQ6IPT4 315 aa15.77■□□□□ 0.12
ECHDC2-224ENST00000543419 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
ECHDC2-224ENST00000543419 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ECHDC2-224ENST00000543419 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
ECHDC2-224ENST00000543419 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
ECHDC2-224ENST00000543419 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
ECHDC2-224ENST00000543419 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
ECHDC2-224ENST00000543419 FBLN2P98095 1184 aa15.64■□□□□ 0.09
ECHDC2-224ENST00000543419 FGD5Q6ZNL6 1462 aa15.64■□□□□ 0.09
ECHDC2-224ENST00000543419 CUX1P39880 1505 aa15.63■□□□□ 0.09
ECHDC2-224ENST00000543419 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
ECHDC2-224ENST00000543419 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
ECHDC2-224ENST00000543419 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
ECHDC2-224ENST00000543419 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
ECHDC2-224ENST00000543419 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
ECHDC2-224ENST00000543419 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
ECHDC2-224ENST00000543419 GAPVD1Q14C86 1478 aa15.49■□□□□ 0.07
ECHDC2-224ENST00000543419 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
ECHDC2-224ENST00000543419 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
ECHDC2-224ENST00000543419 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
ECHDC2-224ENST00000543419 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
ECHDC2-224ENST00000543419 NUP160Q12769 1436 aa15.39■□□□□ 0.05
ECHDC2-224ENST00000543419 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
ECHDC2-224ENST00000543419 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
ECHDC2-224ENST00000543419 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
ECHDC2-224ENST00000543419 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
ECHDC2-224ENST00000543419 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
ECHDC2-224ENST00000543419 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
ECHDC2-224ENST00000543419 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
ECHDC2-224ENST00000543419 BIVM-ERCC5R4GMW8 1640 aa15.3■□□□□ 0.04
ECHDC2-224ENST00000543419 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
ECHDC2-224ENST00000543419 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
ECHDC2-224ENST00000543419 KIF13AQ9H1H9 1805 aa15.21■□□□□ 0.03
ECHDC2-224ENST00000543419 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
ECHDC2-224ENST00000543419 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
ECHDC2-224ENST00000543419 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms