RNA–Protein interactions for RNA: ENST00000543226.1

AC003002.1-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC003002.1, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003002.1-201ENST00000543226 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
AC003002.1-201ENST00000543226 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
AC003002.1-201ENST00000543226 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
AC003002.1-201ENST00000543226 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
AC003002.1-201ENST00000543226 GRIN3BO60391 1043 aa13.3□□□□□ -0.28
AC003002.1-201ENST00000543226 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
AC003002.1-201ENST00000543226 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
AC003002.1-201ENST00000543226 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
AC003002.1-201ENST00000543226 DOT1LQ8TEK3 1739 aa13.3□□□□□ -0.28
AC003002.1-201ENST00000543226 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
AC003002.1-201ENST00000543226 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC003002.1-201ENST00000543226 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
AC003002.1-201ENST00000543226 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
AC003002.1-201ENST00000543226 ATP10DQ9P241 1426 aa13.27□□□□□ -0.29
AC003002.1-201ENST00000543226 ADCY9O60503 1353 aa13.26□□□□□ -0.29
AC003002.1-201ENST00000543226 NSD2O96028 1365 aa13.26□□□□□ -0.29
AC003002.1-201ENST00000543226 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
AC003002.1-201ENST00000543226 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
AC003002.1-201ENST00000543226 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
AC003002.1-201ENST00000543226 POLA2Q14181 598 aa13.25□□□□□ -0.29
AC003002.1-201ENST00000543226 HSPA6P17066 643 aa13.23□□□□□ -0.29
AC003002.1-201ENST00000543226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.23□□□□□ -0.29
AC003002.1-201ENST00000543226 C5P01031 1676 aa13.23□□□□□ -0.29
AC003002.1-201ENST00000543226 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 KCNQ4P56696 695 aa13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 NME9Q86XW9 330 aa13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
AC003002.1-201ENST00000543226 TAF1LQ8IZX4 1826 aa13.21□□□□□ -0.29
AC003002.1-201ENST00000543226 IP6K1Q92551 441 aa13.21□□□□□ -0.29
AC003002.1-201ENST00000543226 CCNL1Q9UK58 526 aaPredicted RBP13.21□□□□□ -0.29
AC003002.1-201ENST00000543226 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
AC003002.1-201ENST00000543226 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
AC003002.1-201ENST00000543226 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
AC003002.1-201ENST00000543226 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
AC003002.1-201ENST00000543226 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
AC003002.1-201ENST00000543226 PCNTO95613 3336 aa13.19□□□□□ -0.3
AC003002.1-201ENST00000543226 USP47Q96K76 1375 aa13.19□□□□□ -0.3
AC003002.1-201ENST00000543226 HMGB2P26583 209 aaKnown RBP13.18□□□□□ -0.3
AC003002.1-201ENST00000543226 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
AC003002.1-201ENST00000543226 MEGF6O75095 1541 aa13.18□□□□□ -0.3
AC003002.1-201ENST00000543226 A0A1W2PP64 1363 aa13.17□□□□□ -0.3
AC003002.1-201ENST00000543226 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
AC003002.1-201ENST00000543226 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
AC003002.1-201ENST00000543226 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
AC003002.1-201ENST00000543226 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
AC003002.1-201ENST00000543226 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
AC003002.1-201ENST00000543226 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
AC003002.1-201ENST00000543226 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
AC003002.1-201ENST00000543226 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
AC003002.1-201ENST00000543226 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
AC003002.1-201ENST00000543226 ZNF526Q8TF50 670 aaPredicted RBP13.14□□□□□ -0.31
AC003002.1-201ENST00000543226 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
AC003002.1-201ENST00000543226 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
AC003002.1-201ENST00000543226 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 HOXC9P31274 260 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
AC003002.1-201ENST00000543226 ITGB4P16144 1822 aa13.12□□□□□ -0.31
AC003002.1-201ENST00000543226 KIF3CO14782 793 aa13.12□□□□□ -0.31
AC003002.1-201ENST00000543226 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
AC003002.1-201ENST00000543226 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
AC003002.1-201ENST00000543226 PALLDQ8WX93 1383 aa13.11□□□□□ -0.31
AC003002.1-201ENST00000543226 APLP1P51693 650 aa13.11□□□□□ -0.31
AC003002.1-201ENST00000543226 MAP2P11137 1827 aaKnown RBP13.09□□□□□ -0.31
AC003002.1-201ENST00000543226 AMPHP49418 695 aa13.09□□□□□ -0.31
AC003002.1-201ENST00000543226 COG3Q96JB2 828 aa13.09□□□□□ -0.31
AC003002.1-201ENST00000543226 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
AC003002.1-201ENST00000543226 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
AC003002.1-201ENST00000543226 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 SMG6Q86US8 1419 aaKnown RBP13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 AK7Q96M32 723 aa13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
AC003002.1-201ENST00000543226 NBPF6Q5VWK0 638 aa13.07□□□□□ -0.32
AC003002.1-201ENST00000543226 AMIGO3Q86WK7 504 aa13.07□□□□□ -0.32
AC003002.1-201ENST00000543226 DNAJC5GQ8N7S2 189 aa13.07□□□□□ -0.32
AC003002.1-201ENST00000543226 NBPF4Q96M43 638 aa13.07□□□□□ -0.32
AC003002.1-201ENST00000543226 TOMM70O94826 608 aa13.06□□□□□ -0.32
AC003002.1-201ENST00000543226 SSFA2P28290 1259 aa13.06□□□□□ -0.32
AC003002.1-201ENST00000543226 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
AC003002.1-201ENST00000543226 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
AC003002.1-201ENST00000543226 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
AC003002.1-201ENST00000543226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
AC003002.1-201ENST00000543226 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
AC003002.1-201ENST00000543226 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
AC003002.1-201ENST00000543226 BRCA1P38398 1863 aaKnown RBP13.05□□□□□ -0.32
AC003002.1-201ENST00000543226 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 FBLN1P23142 703 aa13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 INSRP06213 1382 aa13.04□□□□□ -0.32
AC003002.1-201ENST00000543226 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms