RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, humanhuman

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-209ENST00000542896 AKT1S1Q96B36 256 aa36.27■■■■□ 3.4
PDCD2-209ENST00000542896 MEGF6O75095 1541 aa36.26■■■■□ 3.4
PDCD2-209ENST00000542896 NBPF6Q5VWK0 638 aa36.26■■■■□ 3.4
PDCD2-209ENST00000542896 NBPF4Q96M43 638 aa36.26■■■■□ 3.4
PDCD2-209ENST00000542896 SMG6Q86US8 1419 aaKnown RBP36.25■■■■□ 3.39
PDCD2-209ENST00000542896 USHBP1Q8N6Y0 703 aa36.24■■■■□ 3.39
PDCD2-209ENST00000542896 RAPGEF4Q8WZA2 1011 aa36.22■■■■□ 3.39
PDCD2-209ENST00000542896 KCNQ4P56696 695 aa36.21■■■■□ 3.39
PDCD2-209ENST00000542896 CGNL1Q0VF96 1302 aa36.2■■■■□ 3.39
PDCD2-209ENST00000542896 SLC16A10Q8TF71 515 aa36.2■■■■□ 3.39
PDCD2-209ENST00000542896 TFCP2L1Q9NZI6 479 aa36.2■■■■□ 3.39
PDCD2-209ENST00000542896 NSD2O96028 1365 aa36.19■■■■□ 3.38
PDCD2-209ENST00000542896 RGPD2P0DJD1 1756 aa36.18■■■■□ 3.38
PDCD2-209ENST00000542896 PNPLA7Q6ZV29 1317 aa36.18■■■■□ 3.38
PDCD2-209ENST00000542896 DOT1LQ8TEK3 1739 aa36.17■■■■□ 3.38
PDCD2-209ENST00000542896 TATP17735 454 aaPredicted RBP36.17■■■■□ 3.38
PDCD2-209ENST00000542896 HSP90AB2PQ58FF8 381 aa36.17■■■■□ 3.38
PDCD2-209ENST00000542896 INSRP06213 1382 aa36.15■■■■□ 3.38
PDCD2-209ENST00000542896 MAP3K5Q99683 1374 aa36.15■■■■□ 3.38
PDCD2-209ENST00000542896 POLD1P28340 1107 aa36.15■■■■□ 3.38
PDCD2-209ENST00000542896 CCNL1Q9UK58 526 aaPredicted RBP36.15■■■■□ 3.38
PDCD2-209ENST00000542896 FLT4P35916 1363 aa36.15■■■■□ 3.38
PDCD2-209ENST00000542896 SHANK3Q9BYB0 1731 aa36.13■■■■□ 3.37
PDCD2-209ENST00000542896 KLHL34Q8N239 644 aa36.12■■■■□ 3.37
PDCD2-209ENST00000542896 KIF24Q5T7B8 1368 aa36.12■■■■□ 3.37
PDCD2-209ENST00000542896 PCDH11XQ9BZA7 1347 aa36.09■■■■□ 3.37
PDCD2-209ENST00000542896 PCDH11YQ9BZA8 1340 aa36.09■■■■□ 3.37
PDCD2-209ENST00000542896 CARD14Q9BXL6 1004 aa36.09■■■■□ 3.37
PDCD2-209ENST00000542896 NSD3Q9BZ95 1437 aa36.08■■■■□ 3.37
PDCD2-209ENST00000542896 KIF20BQ96Q89 1820 aa36.07■■■■□ 3.36
PDCD2-209ENST00000542896 QSER1Q2KHR3 1735 aa36.07■■■■□ 3.36
PDCD2-209ENST00000542896 LY75O60449 1722 aa36.06■■■■□ 3.36
PDCD2-209ENST00000542896 EMILIN1Q9Y6C2 1016 aa36.06■■■■□ 3.36
PDCD2-209ENST00000542896 MSH5O43196 834 aa36.04■■■■□ 3.36
PDCD2-209ENST00000542896 GPR162Q16538 588 aa36.04■■■■□ 3.36
PDCD2-209ENST00000542896 ZNF784Q8NCA9 323 aaPredicted RBP36.04■■■■□ 3.36
PDCD2-209ENST00000542896 TIMELESSQ9UNS1 1208 aa36.04■■■■□ 3.36
PDCD2-209ENST00000542896 PPM1GO15355 546 aaPredicted RBP36.01■■■■□ 3.36
PDCD2-209ENST00000542896 MPRIPQ6WCQ1 1025 aa35.99■■■■□ 3.35
PDCD2-209ENST00000542896 CYP27B1O15528 508 aa35.98■■■■□ 3.35
PDCD2-209ENST00000542896 COL23A1Q86Y22 540 aaPredicted RBP35.98■■■■□ 3.35
PDCD2-209ENST00000542896 TUBGCP6Q96RT7 1819 aa35.97■■■■□ 3.35
PDCD2-209ENST00000542896 HMGB2P26583 209 aaKnown RBP35.97■■■■□ 3.35
PDCD2-209ENST00000542896 PELP1Q8IZL8 1130 aaKnown RBP35.97■■■■□ 3.35
PDCD2-209ENST00000542896 PALLDQ8WX93 1383 aa35.97■■■■□ 3.35
PDCD2-209ENST00000542896 COL24A1Q17RW2 1714 aa35.94■■■■□ 3.34
PDCD2-209ENST00000542896 POLR3GLQ9BT43 218 aa35.93■■■■□ 3.34
PDCD2-209ENST00000542896 WASHC2AQ641Q2 1341 aa35.92■■■■□ 3.34
PDCD2-209ENST00000542896 NLGN2Q8NFZ4 835 aa35.92■■■■□ 3.34
PDCD2-209ENST00000542896 SMARCC1Q92922 1105 aaPredicted RBP35.91■■■■□ 3.34
PDCD2-209ENST00000542896 SPG7Q9UQ90 795 aa35.91■■■■□ 3.34
PDCD2-209ENST00000542896 MSL1Q68DK7 614 aa35.9■■■■□ 3.34
PDCD2-209ENST00000542896 FLAD1Q8NFF5 587 aa35.89■■■■□ 3.34
PDCD2-209ENST00000542896 PCGF6Q9BYE7 350 aa35.89■■■■□ 3.34
PDCD2-209ENST00000542896 CLSPNQ9HAW4 1339 aa35.88■■■■□ 3.33
PDCD2-209ENST00000542896 UTRNP46939 3433 aa35.88■■■■□ 3.33
PDCD2-209ENST00000542896 NCAPD2Q15021 1401 aa35.88■■■■□ 3.33
PDCD2-209ENST00000542896 EYA1Q99502 592 aa35.87■■■■□ 3.33
PDCD2-209ENST00000542896 CHD4Q14839 1912 aa35.85■■■■□ 3.33
PDCD2-209ENST00000542896 NKX1-1Q15270 411 aaPredicted RBP35.85■■■■□ 3.33
PDCD2-209ENST00000542896 PIGBQ92521 554 aa35.85■■■■□ 3.33
PDCD2-209ENST00000542896 POLKQ9UBT6 870 aa35.85■■■■□ 3.33
PDCD2-209ENST00000542896 C5P01031 1676 aa35.84■■■■□ 3.33
PDCD2-209ENST00000542896 AK7Q96M32 723 aa35.84■■■■□ 3.33
PDCD2-209ENST00000542896 PKD1L3Q7Z443 1732 aa35.83■■■■□ 3.33
PDCD2-209ENST00000542896 TOGARAM1Q9Y4F4 1720 aa35.81■■■■□ 3.32
PDCD2-209ENST00000542896 TNNT2P45379 298 aaPredicted RBP35.81■■■■□ 3.32
PDCD2-209ENST00000542896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.81■■■■□ 3.32
PDCD2-209ENST00000542896 ANKRD26Q9UPS8 1709 aa35.8■■■■□ 3.32
PDCD2-209ENST00000542896 TMOD3Q9NYL9 352 aa35.78■■■■□ 3.32
PDCD2-209ENST00000542896 IFNL2Q8IZJ0 200 aa35.77■■■■□ 3.32
PDCD2-209ENST00000542896 GRIN3BO60391 1043 aa35.76■■■■□ 3.32
PDCD2-209ENST00000542896 PHF14O94880 888 aa35.76■■■■□ 3.32
PDCD2-209ENST00000542896 EIF4A2Q14240 407 aaKnown RBP35.76■■■■□ 3.32
PDCD2-209ENST00000542896 PHKG2P15735 406 aa35.75■■■■□ 3.31
PDCD2-209ENST00000542896 YBX3P16989 372 aaKnown RBP eCLIP35.75■■■■□ 3.31
PDCD2-209ENST00000542896 ITGB4P16144 1822 aa35.75■■■■□ 3.31
PDCD2-209ENST00000542896 C4BP0C0L5 1744 aa35.74■■■■□ 3.31
PDCD2-209ENST00000542896 LOC102724428A0A0B4J2F2 783 aa35.74■■■■□ 3.31
PDCD2-209ENST00000542896 SIK1P57059 783 aa35.74■■■■□ 3.31
PDCD2-209ENST00000542896 EIF4G2P78344 907 aaKnown RBP eCLIP35.74■■■■□ 3.31
PDCD2-209ENST00000542896 CD2APQ9Y5K6 639 aa35.74■■■■□ 3.31
PDCD2-209ENST00000542896 TAF1LQ8IZX4 1826 aa35.73■■■■□ 3.31
PDCD2-209ENST00000542896 MAP2P11137 1827 aaKnown RBP35.73■■■■□ 3.31
PDCD2-209ENST00000542896 AMIGO3Q86WK7 504 aa35.72■■■■□ 3.31
PDCD2-209ENST00000542896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.71■■■■□ 3.31
PDCD2-209ENST00000542896 HSPA5P11021 654 aaKnown RBP35.7■■■■□ 3.31
PDCD2-209ENST00000542896 C1QTNF8P60827 252 aa35.7■■■■□ 3.31
PDCD2-209ENST00000542896 SMIM5Q71RC9 77 aa35.7■■■■□ 3.31
PDCD2-209ENST00000542896 LINC00116Q8NCU8 138 aa35.7■■■■□ 3.31
PDCD2-209ENST00000542896 ASAP1Q9ULH1 1129 aa35.7■■■■□ 3.31
PDCD2-209ENST00000542896 PANK3Q9H999 370 aa35.69■■■■□ 3.3
PDCD2-209ENST00000542896 SSFA2P28290 1259 aa35.68■■■■□ 3.3
PDCD2-209ENST00000542896 ATP6V1AP38606 617 aa35.67■■■■□ 3.3
PDCD2-209ENST00000542896 PLEKHG2Q9H7P9 1386 aa35.64■■■■□ 3.3
PDCD2-209ENST00000542896 IGSF1Q8N6C5 1336 aa35.64■■■■□ 3.3
PDCD2-209ENST00000542896 SENP3-EIF4A1A0A087X0R7 540 aa35.64■■■■□ 3.3
PDCD2-209ENST00000542896 GIGYF1O75420 1035 aaPredicted RBP35.64■■■■□ 3.3
PDCD2-209ENST00000542896 ITPK1Q13572 414 aa35.64■■■■□ 3.3
PDCD2-209ENST00000542896 ATG3Q9NT62 314 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms