RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SDSP20132 328 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
PRKAB1-207ENST00000542698 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 TTC5Q8N0Z6 440 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 PHACTR3Q96KR7 559 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 RAB3GAP1Q15042 981 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 ANKRD44Q8N8A2 993 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 UHRF1BP1LA0JNW5 1464 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 CDC42BPAQ5VT25 1732 aa9.84□□□□□ -0.83
PRKAB1-207ENST00000542698 HIP1O00291 1037 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 TPM3P06753 285 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 NUTM1Q86Y26 1132 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 ERC1Q8IUD2 1116 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 DCTPP1Q9H773 170 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 BCORL1Q5H9F3 1711 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 MEIS3Q99687 375 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 PTPRTO14522 1441 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 LRRFIP1Q32MZ4 808 aaKnown RBP9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 LARP1BQ659C4 914 aaKnown RBP9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 KIF1BPQ96EK5 621 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 TRIM5Q9C035 493 aa9.83□□□□□ -0.84
PRKAB1-207ENST00000542698 KCNA4P22459 653 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 PLEKHO1Q53GL0 409 aaPredicted RBP9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 CCDC34Q96HJ3 373 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 A0A1W2PP64 1363 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 CCDC192P0DO97 292 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 KRT85P78386 507 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
PRKAB1-207ENST00000542698 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 CPLX1O14810 134 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 FLIIQ13045 1269 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 UQCRHLA0A096LP55 91 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 UQCRHP07919 91 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 CPLX2Q6PUV4 134 aaKnown RBP9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 JAKMIP1Q96N16 626 aaKnown RBP9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 NEUROD6Q96NK8 337 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 MAST1Q9Y2H9 1570 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 RAB11FIP3O75154 756 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 SPC24Q8NBT2 197 aa9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 ZSCAN31Q96LW9 406 aaPredicted RBP9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 LRRFIP2Q9Y608 721 aaKnown RBP9.81□□□□□ -0.84
PRKAB1-207ENST00000542698 PDE1AP54750 535 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 XPCQ01831 940 aaPredicted RBP9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 SDF4Q9BRK5 362 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 PDRG1Q9NUG6 133 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 GLRX3O76003 335 aaKnown RBP9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 TSHZ3Q63HK5 1081 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 TMX3Q96JJ7 454 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 RRAGDQ9NQL2 400 aaPredicted RBP9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 CASTP20810 708 aaKnown RBP9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 BLOC1S2Q6QNY1 142 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 TOMM22Q9NS69 142 aa9.8□□□□□ -0.84
PRKAB1-207ENST00000542698 FOSBP53539 338 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 HSP90AB2PQ58FF8 381 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 KDM5DQ9BY66 1539 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 SBNO2Q9Y2G9 1366 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 AACSQ86V21 672 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 SIL1Q9H173 461 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 LIMCH1Q9UPQ0 1083 aa9.79□□□□□ -0.84
PRKAB1-207ENST00000542698 ASXL2Q76L83 1435 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 ZNF518AQ6AHZ1 1483 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 ABCC2Q92887 1545 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 FBXW7Q969H0 707 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 USP26Q9BXU7 913 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 STK3Q13188 491 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 CEP85Q6P2H3 762 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 CCDC83Q8IWF9 413 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 POLR1AO95602 1720 aaPredicted RBP9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 TRDNQ13061 729 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 CCDC183Q5T5S1 534 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 ZMYM3Q14202 1370 aa9.78□□□□□ -0.84
PRKAB1-207ENST00000542698 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 BTBD11A6QL63 1104 aa9.77□□□□□ -0.85
PRKAB1-207ENST00000542698 KINO60870 393 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms