RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 EML3Q32P44 896 aa14.24□□□□□ -0.13
MRPS35-204ENST00000542199 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
MRPS35-204ENST00000542199 ALDH1A1P00352 501 aa14.23□□□□□ -0.13
MRPS35-204ENST00000542199 NR3C2P08235 984 aa14.23□□□□□ -0.13
MRPS35-204ENST00000542199 TMPRSS4Q9NRS4 437 aa14.23□□□□□ -0.13
MRPS35-204ENST00000542199 GDF9O60383 454 aa14.22□□□□□ -0.13
MRPS35-204ENST00000542199 SCTRP47872 440 aa14.21□□□□□ -0.13
MRPS35-204ENST00000542199 CRTC2Q53ET0 693 aaPredicted RBP14.21□□□□□ -0.13
MRPS35-204ENST00000542199 ATG7O95352 703 aa14.2□□□□□ -0.14
MRPS35-204ENST00000542199 TRIM67Q6ZTA4 783 aa14.2□□□□□ -0.14
MRPS35-204ENST00000542199 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
MRPS35-204ENST00000542199 LZTS3O60299 673 aaPredicted RBP14.19□□□□□ -0.14
MRPS35-204ENST00000542199 CLDN10P78369 228 aa14.19□□□□□ -0.14
MRPS35-204ENST00000542199 CARNS1A5YM72 827 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L21D6R901 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L20D6RJB6 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 RASA1P20936 1047 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 USP17L24Q0WX57 530 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 PPP1R26Q5T8A7 1209 aaPredicted RBP14.18□□□□□ -0.14
MRPS35-204ENST00000542199 CCDC116Q8IYX3 515 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 NOD1Q9Y239 953 aa14.18□□□□□ -0.14
MRPS35-204ENST00000542199 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
MRPS35-204ENST00000542199 ATP5J2-PTCD1G3V325 749 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 J3QL48 77 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 NR5A1Q13285 461 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 OGFOD1Q8N543 542 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 ZNF784Q8NCA9 323 aaPredicted RBP14.17□□□□□ -0.14
MRPS35-204ENST00000542199 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
MRPS35-204ENST00000542199 ZMIZ1Q9ULJ6 1067 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 KIAA1024Q9UPX6 916 aa14.17□□□□□ -0.14
MRPS35-204ENST00000542199 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
MRPS35-204ENST00000542199 PTK7Q13308 1070 aa14.16□□□□□ -0.14
MRPS35-204ENST00000542199 NNTQ13423 1086 aa14.16□□□□□ -0.14
MRPS35-204ENST00000542199 STK32AQ8WU08 396 aa14.16□□□□□ -0.14
MRPS35-204ENST00000542199 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
MRPS35-204ENST00000542199 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
MRPS35-204ENST00000542199 GTF2IP78347 998 aa14.15□□□□□ -0.14
MRPS35-204ENST00000542199 DHX9Q08211 1270 aaKnown RBP14.15□□□□□ -0.14
MRPS35-204ENST00000542199 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
MRPS35-204ENST00000542199 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
MRPS35-204ENST00000542199 CCDC125Q86Z20 511 aa14.14□□□□□ -0.15
MRPS35-204ENST00000542199 CYP4X1Q8N118 509 aa14.14□□□□□ -0.15
MRPS35-204ENST00000542199 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
MRPS35-204ENST00000542199 WASF2Q9Y6W5 498 aa14.14□□□□□ -0.15
MRPS35-204ENST00000542199 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.151e-6■■■□□ 14.7
MRPS35-204ENST00000542199 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
MRPS35-204ENST00000542199 USP4Q13107 963 aa14.13□□□□□ -0.15
MRPS35-204ENST00000542199 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
MRPS35-204ENST00000542199 DNAAF2Q9NVR5 837 aaKnown RBP14.13□□□□□ -0.15
MRPS35-204ENST00000542199 TOR4AQ9NXH8 423 aa14.13□□□□□ -0.15
MRPS35-204ENST00000542199 PCDHGA11Q9Y5H2 935 aa14.13□□□□□ -0.15
MRPS35-204ENST00000542199 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
MRPS35-204ENST00000542199 CC2D2BQ6DHV5 1058 aa14.12□□□□□ -0.15
MRPS35-204ENST00000542199 TRIM50Q86XT4 487 aa14.12□□□□□ -0.15
MRPS35-204ENST00000542199 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
MRPS35-204ENST00000542199 ZBTB7BO15156 539 aaPredicted RBP14.11□□□□□ -0.15
MRPS35-204ENST00000542199 LILRA1O75019 489 aa14.11□□□□□ -0.15
MRPS35-204ENST00000542199 MYCP01106 439 aaPredicted RBP14.11□□□□□ -0.15
MRPS35-204ENST00000542199 SOGA1O94964 1423 aa14.1□□□□□ -0.15
MRPS35-204ENST00000542199 SMPD1P17405 629 aa14.1□□□□□ -0.15
MRPS35-204ENST00000542199 ELOAQ14241 798 aaKnown RBP14.1□□□□□ -0.15
MRPS35-204ENST00000542199 TMEM164Q5U3C3 297 aa14.1□□□□□ -0.15
MRPS35-204ENST00000542199 OSBPL3Q9H4L5 887 aa14.1□□□□□ -0.15
MRPS35-204ENST00000542199 CUX1P39880 1505 aa14.1□□□□□ -0.15
MRPS35-204ENST00000542199 TMEM88BA6NKF7 163 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 DKK1O94907 266 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 STAU1O95793 577 aaKnown RBP14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
MRPS35-204ENST00000542199 ATP1A2P50993 1020 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PRR20EP86478 221 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PRR20CP86479 221 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PRR20DP86480 221 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PRR20BP86481 221 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 PRR20AP86496 221 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 SIRT1Q96EB6 747 aa14.09□□□□□ -0.15
MRPS35-204ENST00000542199 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
MRPS35-204ENST00000542199 ADD1P35611 737 aaKnown RBP14.08□□□□□ -0.16
MRPS35-204ENST00000542199 PSME1Q06323 249 aa14.08□□□□□ -0.16
MRPS35-204ENST00000542199 DPYDQ12882 1025 aa14.08□□□□□ -0.16
MRPS35-204ENST00000542199 ANKMY2Q8IV38 441 aa14.08□□□□□ -0.16
MRPS35-204ENST00000542199 EMILIN1Q9Y6C2 1016 aa14.08□□□□□ -0.16
MRPS35-204ENST00000542199 MYT1Q01538 1121 aa14.07□□□□□ -0.16
MRPS35-204ENST00000542199 TPCN2Q8NHX9 752 aa14.07□□□□□ -0.16
MRPS35-204ENST00000542199 ITPKCQ96DU7 683 aa14.07□□□□□ -0.16
MRPS35-204ENST00000542199 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
MRPS35-204ENST00000542199 CCDC102BQ68D86 513 aa14.06□□□□□ -0.16
MRPS35-204ENST00000542199 SIX5Q8N196 739 aa14.06□□□□□ -0.16
MRPS35-204ENST00000542199 LARGE2Q8N3Y3 721 aa14.06□□□□□ -0.16
MRPS35-204ENST00000542199 KLF16Q9BXK1 252 aaPredicted RBP14.06□□□□□ -0.16
MRPS35-204ENST00000542199 PGPEP1Q9NXJ5 209 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms