RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ARHGAP9Q9BRR9 750 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 GEMIN8Q9NWZ8 242 aaKnown RBP5.52□□□□□ -1.53
SNHG1-219ENST00000542112 USTQ9Y2C2 406 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 TOP2BQ02880 1626 aa5.52□□□□□ -1.53
SNHG1-219ENST00000542112 NBPF20Q3BBV1 942 aa5.51□□□□□ -1.53
SNHG1-219ENST00000542112 TBC1D9Q6ZT07 1266 aa5.51□□□□□ -1.53
SNHG1-219ENST00000542112 CCDC24Q8N4L8 307 aa5.51□□□□□ -1.53
SNHG1-219ENST00000542112 PSMD1Q99460 953 aa5.51□□□□□ -1.53
SNHG1-219ENST00000542112 RRAGDQ9NQL2 400 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-219ENST00000542112 LZTS3O60299 673 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-219ENST00000542112 ATG7O95352 703 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 APPP05067 770 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 NFKBIBQ15653 356 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 SLFNL1Q499Z3 407 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 POTEGQ6S5H5 508 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 SH3BP5LQ7L8J4 393 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 ZBTB33Q86T24 672 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 PLEKHM2Q8IWE5 1019 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 ZNF516Q92618 1163 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 HDAC5Q9UQL6 1122 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 PCDHB9Q9Y5E1 797 aa5.5□□□□□ -1.53
SNHG1-219ENST00000542112 PATL2C9JE40 543 aaKnown RBP5.49□□□□□ -1.53
SNHG1-219ENST00000542112 SKIP12755 728 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 RALBP1Q15311 655 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
SNHG1-219ENST00000542112 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
SNHG1-219ENST00000542112 PTCRAQ6ISU1 281 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-219ENST00000542112 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-219ENST00000542112 ADAM32Q8TC27 787 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 OCSTAMPQ9BR26 566 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 VRTNQ9H8Y1 702 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 CEP126Q9P2H0 1117 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 LAMC3Q9Y6N6 1575 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 KIF21AQ7Z4S6 1674 aa5.49□□□□□ -1.53
SNHG1-219ENST00000542112 CUX1P39880 1505 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 CADPSQ9ULU8 1353 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 USP17L3A6NCW0 530 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 USP17L4A6NCW7 530 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 PIK3CDO00329 1044 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 S1PR4O95977 384 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 MAP7D1Q3KQU3 841 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 USP17L2Q6R6M4 530 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 USP17L1Q7RTZ2 530 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 BPHLQ86WA6 291 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-219ENST00000542112 RNF135Q8IUD6 432 aa5.48□□□□□ -1.53
SNHG1-219ENST00000542112 ZNF830Q96NB3 372 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-219ENST00000542112 USP17L5A8MUK1 530 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 DYNC1I1O14576 645 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 ELOAQ14241 798 aaKnown RBP5.47□□□□□ -1.53
SNHG1-219ENST00000542112 KANK4Q5T7N3 995 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-219ENST00000542112 CC2D2BQ6DHV5 1058 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 SH3RF1Q7Z6J0 888 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 DZIP3Q86Y13 1208 aaKnown RBP5.47□□□□□ -1.53
SNHG1-219ENST00000542112 AEBP1Q8IUX7 1158 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 ZNF511Q8NB15 262 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 NKX2-3Q8TAU0 364 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 BAP1Q92560 729 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 HCSTQ9UBK5 93 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 FCF1Q9Y324 198 aaKnown RBP5.47□□□□□ -1.53
SNHG1-219ENST00000542112 NESP48681 1621 aa5.47□□□□□ -1.53
SNHG1-219ENST00000542112 PHLDB1Q86UU1 1377 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 ESPNB1AK53 854 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 ATP5J2-PTCD1G3V325 749 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 ANP32CO43423 234 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 BRD1O95696 1058 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 ITGBL1O95965 494 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-219ENST00000542112 GGCXP38435 758 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 KCNC4Q03721 635 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 AGERQ15109 404 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 CCDC125Q86Z20 511 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 CREBRFQ8IUR6 639 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 PHTF2Q8N3S3 785 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 PLPP7Q8NBV4 271 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 FAM174AQ8TBP5 190 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 CCDC94Q9BW85 323 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-219ENST00000542112 EFCC1Q9HA90 598 aa5.46□□□□□ -1.54
SNHG1-219ENST00000542112 WDR97A6NE52 1622 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 NINLQ9Y2I6 1382 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 MAGEB6P1A0A0J9YX57 407 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CCDC66A2RUB6 948 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 FAM196BA6NMK8 535 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 MAFGO15525 162 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 ZBTB24O43167 697 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-219ENST00000542112 MRE11P49959 708 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 KCNA1Q09470 495 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CDCA8Q53HL2 280 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 HSP90AB3PQ58FF7 597 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 RNF20Q5VTR2 975 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CTR9Q6PD62 1173 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.45□□□□□ -1.54
SNHG1-219ENST00000542112 DCAF11Q8TEB1 546 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 SLC10A4Q96EP9 437 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CARD14Q9BXL6 1004 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 RBM28Q9NW13 759 aaKnown RBP5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CHIC2Q9UKJ5 165 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 CDV3Q9UKY7 258 aaKnown RBP5.45□□□□□ -1.54
SNHG1-219ENST00000542112 ZBED9Q6R2W3 1325 aa5.45□□□□□ -1.54
SNHG1-219ENST00000542112 RUSC2Q8N2Y8 1516 aa5.44□□□□□ -1.54
SNHG1-219ENST00000542112 OFD1O75665 1012 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms