RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
CD4-210ENST00000541982 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
CD4-210ENST00000541982 A0A1W2PP64 1363 aa21.99■■□□□ 1.11
CD4-210ENST00000541982 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
CD4-210ENST00000541982 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
CD4-210ENST00000541982 NLGN2Q8NFZ4 835 aa21.98■■□□□ 1.11
CD4-210ENST00000541982 KCNQ4P56696 695 aa21.97■■□□□ 1.11
CD4-210ENST00000541982 ZCRB1Q8TBF4 217 aaKnown RBP21.97■■□□□ 1.11
CD4-210ENST00000541982 CCNL1Q9UK58 526 aaPredicted RBP21.97■■□□□ 1.11
CD4-210ENST00000541982 MSH5O43196 834 aa21.96■■□□□ 1.11
CD4-210ENST00000541982 COG3Q96JB2 828 aa21.96■■□□□ 1.11
CD4-210ENST00000541982 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
CD4-210ENST00000541982 AMPHP49418 695 aa21.95■■□□□ 1.1
CD4-210ENST00000541982 NSD2O96028 1365 aa21.94■■□□□ 1.1
CD4-210ENST00000541982 USP47Q96K76 1375 aa21.94■■□□□ 1.1
CD4-210ENST00000541982 HOXC9P31274 260 aa21.93■■□□□ 1.1
CD4-210ENST00000541982 IFFO2Q5TF58 517 aa21.93■■□□□ 1.1
CD4-210ENST00000541982 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
CD4-210ENST00000541982 MAP3K19Q56UN5 1328 aa21.92■■□□□ 1.1
CD4-210ENST00000541982 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
CD4-210ENST00000541982 COL23A1Q86Y22 540 aaPredicted RBP21.91■■□□□ 1.1
CD4-210ENST00000541982 RGPD2P0DJD1 1756 aa21.91■■□□□ 1.1
CD4-210ENST00000541982 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
CD4-210ENST00000541982 SLC24A1O60721 1099 aa21.89■■□□□ 1.09
CD4-210ENST00000541982 CD2APQ9Y5K6 639 aa21.89■■□□□ 1.09
CD4-210ENST00000541982 CEP350Q5VT06 3117 aa21.89■■□□□ 1.09
CD4-210ENST00000541982 RTL1A6NKG5 1358 aa21.88■■□□□ 1.09
CD4-210ENST00000541982 MEGF6O75095 1541 aa21.88■■□□□ 1.09
CD4-210ENST00000541982 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
CD4-210ENST00000541982 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
CD4-210ENST00000541982 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
CD4-210ENST00000541982 C5P01031 1676 aa21.85■■□□□ 1.09
CD4-210ENST00000541982 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
CD4-210ENST00000541982 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
CD4-210ENST00000541982 GPBP1L1Q9HC44 474 aaPredicted RBP21.84■■□□□ 1.09
CD4-210ENST00000541982 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.09
CD4-210ENST00000541982 NBPF6Q5VWK0 638 aa21.83■■□□□ 1.09
CD4-210ENST00000541982 NBPF4Q96M43 638 aa21.83■■□□□ 1.09
CD4-210ENST00000541982 FBLN1P23142 703 aa21.82■■□□□ 1.08
CD4-210ENST00000541982 TAF1LQ8IZX4 1826 aa21.82■■□□□ 1.08
CD4-210ENST00000541982 PCDH11XQ9BZA7 1347 aa21.81■■□□□ 1.08
CD4-210ENST00000541982 PCDH11YQ9BZA8 1340 aa21.81■■□□□ 1.08
CD4-210ENST00000541982 PALLDQ8WX93 1383 aa21.8■■□□□ 1.08
CD4-210ENST00000541982 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
CD4-210ENST00000541982 USHBP1Q8N6Y0 703 aa21.79■■□□□ 1.08
CD4-210ENST00000541982 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
CD4-210ENST00000541982 TESK2Q96S53 571 aa21.79■■□□□ 1.08
CD4-210ENST00000541982 AK7Q96M32 723 aa21.78■■□□□ 1.08
CD4-210ENST00000541982 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
CD4-210ENST00000541982 ST20-MTHFSA0A0A6YYL1 179 aa21.77■■□□□ 1.08
CD4-210ENST00000541982 MPRIPQ6WCQ1 1025 aa21.77■■□□□ 1.08
CD4-210ENST00000541982 ADCY9O60503 1353 aa21.76■■□□□ 1.07
CD4-210ENST00000541982 FYB1O15117 783 aa21.76■■□□□ 1.07
CD4-210ENST00000541982 HSPA6P17066 643 aa21.76■■□□□ 1.07
CD4-210ENST00000541982 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
CD4-210ENST00000541982 INSRP06213 1382 aa21.75■■□□□ 1.07
CD4-210ENST00000541982 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
CD4-210ENST00000541982 KIF24Q5T7B8 1368 aa21.74■■□□□ 1.07
CD4-210ENST00000541982 ITGB4P16144 1822 aa21.74■■□□□ 1.07
CD4-210ENST00000541982 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
CD4-210ENST00000541982 FLT4P35916 1363 aa21.74■■□□□ 1.07
CD4-210ENST00000541982 IGSF1Q8N6C5 1336 aa21.73■■□□□ 1.07
CD4-210ENST00000541982 HSP90AB2PQ58FF8 381 aa21.72■■□□□ 1.07
CD4-210ENST00000541982 ZNF526Q8TF50 670 aaPredicted RBP21.72■■□□□ 1.07
CD4-210ENST00000541982 UBR3Q6ZT12 1888 aa21.72■■□□□ 1.07
CD4-210ENST00000541982 CYP27B1O15528 508 aa21.71■■□□□ 1.07
CD4-210ENST00000541982 SSFA2P28290 1259 aa21.71■■□□□ 1.07
CD4-210ENST00000541982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
CD4-210ENST00000541982 TMF1P82094 1093 aa21.7■■□□□ 1.06
CD4-210ENST00000541982 PHF14O94880 888 aa21.69■■□□□ 1.06
CD4-210ENST00000541982 TOGARAM1Q9Y4F4 1720 aa21.69■■□□□ 1.06
CD4-210ENST00000541982 KIF20BQ96Q89 1820 aa21.69■■□□□ 1.06
CD4-210ENST00000541982 PKD1L3Q7Z443 1732 aa21.68■■□□□ 1.06
CD4-210ENST00000541982 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
CD4-210ENST00000541982 PIGBQ92521 554 aa21.67■■□□□ 1.06
CD4-210ENST00000541982 SPG7Q9UQ90 795 aa21.67■■□□□ 1.06
CD4-210ENST00000541982 LOC102724428A0A0B4J2F2 783 aa21.66■■□□□ 1.06
CD4-210ENST00000541982 SIK1P57059 783 aa21.66■■□□□ 1.06
CD4-210ENST00000541982 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
CD4-210ENST00000541982 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
CD4-210ENST00000541982 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.06
CD4-210ENST00000541982 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
CD4-210ENST00000541982 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
CD4-210ENST00000541982 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
CD4-210ENST00000541982 KIF3CO14782 793 aa21.62■■□□□ 1.05
CD4-210ENST00000541982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.62■■□□□ 1.05
CD4-210ENST00000541982 GNPATO15228 680 aa21.61■■□□□ 1.05
CD4-210ENST00000541982 SMIM5Q71RC9 77 aa21.61■■□□□ 1.05
CD4-210ENST00000541982 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
CD4-210ENST00000541982 NCAPD2Q15021 1401 aa21.61■■□□□ 1.05
CD4-210ENST00000541982 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
CD4-210ENST00000541982 EMILIN1Q9Y6C2 1016 aa21.6■■□□□ 1.05
CD4-210ENST00000541982 APLP1P51693 650 aa21.59■■□□□ 1.05
CD4-210ENST00000541982 KIF13BQ9NQT8 1826 aa21.58■■□□□ 1.05
CD4-210ENST00000541982 PPM1GO15355 546 aaPredicted RBP21.58■■□□□ 1.05
CD4-210ENST00000541982 MMP10P09238 476 aa21.58■■□□□ 1.05
CD4-210ENST00000541982 TGFB2P61812 414 aa21.58■■□□□ 1.05
CD4-210ENST00000541982 IFNL2Q8IZJ0 200 aa21.58■■□□□ 1.05
CD4-210ENST00000541982 ASAP1Q9ULH1 1129 aa21.57■■□□□ 1.04
CD4-210ENST00000541982 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms