RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
ITM2C-208ENST00000541852 SGIP1Q9BQI5 828 aa20.78■□□□□ 0.92
ITM2C-208ENST00000541852 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.92
ITM2C-208ENST00000541852 NBPF4Q96M43 638 aa20.77■□□□□ 0.92
ITM2C-208ENST00000541852 ARXQ96QS3 562 aa20.77■□□□□ 0.92
ITM2C-208ENST00000541852 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.91
ITM2C-208ENST00000541852 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
ITM2C-208ENST00000541852 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
ITM2C-208ENST00000541852 FHDC1Q9C0D6 1143 aaPredicted RBP20.76■□□□□ 0.91
ITM2C-208ENST00000541852 INSRP06213 1382 aa20.75■□□□□ 0.91
ITM2C-208ENST00000541852 TFCP2L1Q9NZI6 479 aa20.74■□□□□ 0.91
ITM2C-208ENST00000541852 POLD1P28340 1107 aa20.73■□□□□ 0.91
ITM2C-208ENST00000541852 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
ITM2C-208ENST00000541852 FLT4P35916 1363 aa20.72■□□□□ 0.91
ITM2C-208ENST00000541852 PAPPAQ13219 1627 aa20.72■□□□□ 0.91
ITM2C-208ENST00000541852 HSP90AB2PQ58FF8 381 aa20.72■□□□□ 0.91
ITM2C-208ENST00000541852 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
ITM2C-208ENST00000541852 MYOM1P52179 1685 aa20.7■□□□□ 0.91
ITM2C-208ENST00000541852 CARD14Q9BXL6 1004 aa20.7■□□□□ 0.9
ITM2C-208ENST00000541852 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
ITM2C-208ENST00000541852 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
ITM2C-208ENST00000541852 MEGF6O75095 1541 aa20.69■□□□□ 0.9
ITM2C-208ENST00000541852 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
ITM2C-208ENST00000541852 RGPD2P0DJD1 1756 aa20.68■□□□□ 0.9
ITM2C-208ENST00000541852 USHBP1Q8N6Y0 703 aa20.67■□□□□ 0.9
ITM2C-208ENST00000541852 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
ITM2C-208ENST00000541852 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
ITM2C-208ENST00000541852 NSD2O96028 1365 aa20.66■□□□□ 0.9
ITM2C-208ENST00000541852 FLAD1Q8NFF5 587 aa20.65■□□□□ 0.9
ITM2C-208ENST00000541852 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
ITM2C-208ENST00000541852 KIF20BQ96Q89 1820 aa20.64■□□□□ 0.9
ITM2C-208ENST00000541852 UTRNP46939 3433 aa20.64■□□□□ 0.89
ITM2C-208ENST00000541852 NSD3Q9BZ95 1437 aa20.64■□□□□ 0.89
ITM2C-208ENST00000541852 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
ITM2C-208ENST00000541852 SPG7Q9UQ90 795 aa20.64■□□□□ 0.89
ITM2C-208ENST00000541852 LY75O60449 1722 aa20.64■□□□□ 0.89
ITM2C-208ENST00000541852 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
ITM2C-208ENST00000541852 KCNQ4P56696 695 aa20.63■□□□□ 0.89
ITM2C-208ENST00000541852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.63■□□□□ 0.89
ITM2C-208ENST00000541852 DOT1LQ8TEK3 1739 aa20.63■□□□□ 0.89
ITM2C-208ENST00000541852 SHANK3Q9BYB0 1731 aa20.62■□□□□ 0.89
ITM2C-208ENST00000541852 GPR162Q16538 588 aa20.62■□□□□ 0.89
ITM2C-208ENST00000541852 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
ITM2C-208ENST00000541852 MSH5O43196 834 aa20.61■□□□□ 0.89
ITM2C-208ENST00000541852 NKX1-1Q15270 411 aaPredicted RBP20.61■□□□□ 0.89
ITM2C-208ENST00000541852 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
ITM2C-208ENST00000541852 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
ITM2C-208ENST00000541852 CYP27B1O15528 508 aa20.6■□□□□ 0.89
ITM2C-208ENST00000541852 CHD4Q14839 1912 aa20.59■□□□□ 0.89
ITM2C-208ENST00000541852 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
ITM2C-208ENST00000541852 COL23A1Q86Y22 540 aaPredicted RBP20.58■□□□□ 0.89
ITM2C-208ENST00000541852 ZNF784Q8NCA9 323 aaPredicted RBP20.58■□□□□ 0.89
ITM2C-208ENST00000541852 POLKQ9UBT6 870 aa20.58■□□□□ 0.89
ITM2C-208ENST00000541852 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
ITM2C-208ENST00000541852 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
ITM2C-208ENST00000541852 EYA1Q99502 592 aa20.57■□□□□ 0.88
ITM2C-208ENST00000541852 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
ITM2C-208ENST00000541852 NCAPD2Q15021 1401 aa20.56■□□□□ 0.88
ITM2C-208ENST00000541852 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
ITM2C-208ENST00000541852 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
ITM2C-208ENST00000541852 IFNL2Q8IZJ0 200 aa20.55■□□□□ 0.88
ITM2C-208ENST00000541852 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
ITM2C-208ENST00000541852 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
ITM2C-208ENST00000541852 PIGBQ92521 554 aa20.54■□□□□ 0.88
ITM2C-208ENST00000541852 AK7Q96M32 723 aa20.52■□□□□ 0.88
ITM2C-208ENST00000541852 TMOD3Q9NYL9 352 aa20.52■□□□□ 0.88
ITM2C-208ENST00000541852 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
ITM2C-208ENST00000541852 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
ITM2C-208ENST00000541852 PKD1L3Q7Z443 1732 aa20.5■□□□□ 0.87
ITM2C-208ENST00000541852 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
ITM2C-208ENST00000541852 SIK1P57059 783 aa20.5■□□□□ 0.87
ITM2C-208ENST00000541852 PANK3Q9H999 370 aa20.5■□□□□ 0.87
ITM2C-208ENST00000541852 ANKRD26Q9UPS8 1709 aa20.5■□□□□ 0.87
ITM2C-208ENST00000541852 ITGB4P16144 1822 aa20.49■□□□□ 0.87
ITM2C-208ENST00000541852 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
ITM2C-208ENST00000541852 PHKG2P15735 406 aa20.49■□□□□ 0.87
ITM2C-208ENST00000541852 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
ITM2C-208ENST00000541852 PELP1Q8IZL8 1130 aaKnown RBP20.49■□□□□ 0.87
ITM2C-208ENST00000541852 C5P01031 1676 aa20.48■□□□□ 0.87
ITM2C-208ENST00000541852 SSFA2P28290 1259 aa20.48■□□□□ 0.87
ITM2C-208ENST00000541852 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
ITM2C-208ENST00000541852 NLGN2Q8NFZ4 835 aa20.48■□□□□ 0.87
ITM2C-208ENST00000541852 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
ITM2C-208ENST00000541852 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
ITM2C-208ENST00000541852 HSPA5P11021 654 aaKnown RBP20.47■□□□□ 0.87
ITM2C-208ENST00000541852 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
ITM2C-208ENST00000541852 AMOTQ4VCS5 1084 aa20.46■□□□□ 0.87
ITM2C-208ENST00000541852 PLEKHO1Q53GL0 409 aaPredicted RBP20.46■□□□□ 0.87
ITM2C-208ENST00000541852 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
ITM2C-208ENST00000541852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.45■□□□□ 0.86
ITM2C-208ENST00000541852 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
ITM2C-208ENST00000541852 ATP6V1AP38606 617 aa20.44■□□□□ 0.86
ITM2C-208ENST00000541852 MORC1Q86VD1 984 aa20.44■□□□□ 0.86
ITM2C-208ENST00000541852 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
ITM2C-208ENST00000541852 ASAP1Q9ULH1 1129 aa20.44■□□□□ 0.86
ITM2C-208ENST00000541852 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
ITM2C-208ENST00000541852 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
ITM2C-208ENST00000541852 C4BP0C0L5 1744 aa20.43■□□□□ 0.86
ITM2C-208ENST00000541852 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
ITM2C-208ENST00000541852 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms