RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
CNOT4-212ENST00000541284 NME9Q86XW9 330 aa12.04□□□□□ -0.48
CNOT4-212ENST00000541284 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
CNOT4-212ENST00000541284 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
CNOT4-212ENST00000541284 HMOX1P09601 288 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 MCM4P33991 863 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
CNOT4-212ENST00000541284 LNPKQ9C0E8 428 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 UBR2Q8IWV8 1755 aa12.03□□□□□ -0.48
CNOT4-212ENST00000541284 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.48
CNOT4-212ENST00000541284 SNX21Q969T3 373 aa12.02□□□□□ -0.49
CNOT4-212ENST00000541284 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
CNOT4-212ENST00000541284 DCCP43146 1447 aa12.01□□□□□ -0.49
CNOT4-212ENST00000541284 C8orf58Q8NAV2 365 aa12.01□□□□□ -0.49
CNOT4-212ENST00000541284 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
CNOT4-212ENST00000541284 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
CNOT4-212ENST00000541284 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
CNOT4-212ENST00000541284 ATP10DQ9P241 1426 aa12.01□□□□□ -0.49
CNOT4-212ENST00000541284 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
CNOT4-212ENST00000541284 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
CNOT4-212ENST00000541284 CRB1P82279 1406 aa12□□□□□ -0.49
CNOT4-212ENST00000541284 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
CNOT4-212ENST00000541284 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
CNOT4-212ENST00000541284 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
CNOT4-212ENST00000541284 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
CNOT4-212ENST00000541284 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
CNOT4-212ENST00000541284 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
CNOT4-212ENST00000541284 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
CNOT4-212ENST00000541284 GNAI1P63096 354 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 C5P01031 1676 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
CNOT4-212ENST00000541284 XRCC6P12956 609 aaKnown RBP eCLIP11.98□□□□□ -0.49
CNOT4-212ENST00000541284 GSPT1P15170 499 aaKnown RBP11.98□□□□□ -0.49
CNOT4-212ENST00000541284 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
CNOT4-212ENST00000541284 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
CNOT4-212ENST00000541284 TTC21BQ7Z4L5 1316 aa11.97□□□□□ -0.49
CNOT4-212ENST00000541284 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
CNOT4-212ENST00000541284 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
CNOT4-212ENST00000541284 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
CNOT4-212ENST00000541284 PXDNQ92626 1479 aa11.97□□□□□ -0.49
CNOT4-212ENST00000541284 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
CNOT4-212ENST00000541284 RRAGDQ9NQL2 400 aaPredicted RBP11.97□□□□□ -0.49
CNOT4-212ENST00000541284 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.49
CNOT4-212ENST00000541284 PLEKHG2Q9H7P9 1386 aa11.96□□□□□ -0.49
CNOT4-212ENST00000541284 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.5
CNOT4-212ENST00000541284 DCTN1Q14203 1278 aa11.96□□□□□ -0.5
CNOT4-212ENST00000541284 MLECQ14165 292 aa11.95□□□□□ -0.5
CNOT4-212ENST00000541284 ANKRD45Q5TZF3 282 aa11.95□□□□□ -0.5
CNOT4-212ENST00000541284 CALD1Q05682 793 aaKnown RBP11.95□□□□□ -0.5
CNOT4-212ENST00000541284 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
CNOT4-212ENST00000541284 MRC1P22897 1456 aa11.95□□□□□ -0.5
CNOT4-212ENST00000541284 TRAK2O60296 914 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 ACEP12821 1306 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 INTS3Q68E01 1043 aaKnown RBP11.94□□□□□ -0.5
CNOT4-212ENST00000541284 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
CNOT4-212ENST00000541284 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
CNOT4-212ENST00000541284 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
CNOT4-212ENST00000541284 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
CNOT4-212ENST00000541284 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
CNOT4-212ENST00000541284 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.93□□□□□ -0.5
CNOT4-212ENST00000541284 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
CNOT4-212ENST00000541284 STAG3Q9UJ98 1225 aa11.93□□□□□ -0.5
CNOT4-212ENST00000541284 DCTPP1Q9H773 170 aa11.93□□□□□ -0.5
CNOT4-212ENST00000541284 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
CNOT4-212ENST00000541284 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
CNOT4-212ENST00000541284 CHL1O00533 1208 aa11.92□□□□□ -0.5
CNOT4-212ENST00000541284 COG3Q96JB2 828 aa11.92□□□□□ -0.5
CNOT4-212ENST00000541284 CIZ1Q9ULV3 898 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-212ENST00000541284 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
CNOT4-212ENST00000541284 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CNOT4-212ENST00000541284 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
CNOT4-212ENST00000541284 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
CNOT4-212ENST00000541284 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
CNOT4-212ENST00000541284 MSH6P52701 1360 aa11.91□□□□□ -0.5
CNOT4-212ENST00000541284 LMOD3Q0VAK6 560 aa11.91□□□□□ -0.5
CNOT4-212ENST00000541284 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
CNOT4-212ENST00000541284 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-212ENST00000541284 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.5
CNOT4-212ENST00000541284 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
CNOT4-212ENST00000541284 OTUD7AQ8TE49 926 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-212ENST00000541284 TOGARAM1Q9Y4F4 1720 aa11.9□□□□□ -0.5
CNOT4-212ENST00000541284 GZF1Q9H116 711 aaPredicted RBP11.9□□□□□ -0.5
CNOT4-212ENST00000541284 CHMP4BQ9H444 224 aaKnown RBP11.9□□□□□ -0.5
CNOT4-212ENST00000541284 AK9Q5TCS8 1911 aa11.9□□□□□ -0.51
CNOT4-212ENST00000541284 GOLGA6L3A6NEY3 463 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 KCNA6P17658 529 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 CEP85Q6P2H3 762 aa11.89□□□□□ -0.51
CNOT4-212ENST00000541284 GAS2L3Q86XJ1 694 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms