RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 ANO8Q9HCE9 1232 aaPredicted RBP27.7■■■□□ 2.02
ATN1-204ENST00000541029 DDX54Q8TDD1 881 aaKnown RBP27.69■■■□□ 2.02
ATN1-204ENST00000541029 PAPPAQ13219 1627 aa27.69■■■□□ 2.02
ATN1-204ENST00000541029 PROM2Q8N271 834 aa27.68■■■□□ 2.02
ATN1-204ENST00000541029 PKD1L3Q7Z443 1732 aa27.67■■■□□ 2.02
ATN1-204ENST00000541029 TXNRD1Q16881 649 aa27.66■■■□□ 2.02
ATN1-204ENST00000541029 PPM1GO15355 546 aaPredicted RBP27.64■■■□□ 2.02
ATN1-204ENST00000541029 PANK3Q9H999 370 aa27.64■■■□□ 2.02
ATN1-204ENST00000541029 ZCRB1Q8TBF4 217 aaKnown RBP27.63■■■□□ 2.01
ATN1-204ENST00000541029 LY75O60449 1722 aa27.63■■■□□ 2.01
ATN1-204ENST00000541029 RAPGEF4Q8WZA2 1011 aa27.62■■■□□ 2.01
ATN1-204ENST00000541029 NCAPD2Q15021 1401 aa27.61■■■□□ 2.01
ATN1-204ENST00000541029 TOGARAM1Q9Y4F4 1720 aa27.61■■■□□ 2.01
ATN1-204ENST00000541029 TATP17735 454 aaPredicted RBP27.59■■■□□ 2.01
ATN1-204ENST00000541029 TNNT2P45379 298 aaPredicted RBP27.59■■■□□ 2.01
ATN1-204ENST00000541029 NSD2O96028 1365 aa27.59■■■□□ 2.01
ATN1-204ENST00000541029 POLKQ9UBT6 870 aa27.58■■■□□ 2.01
ATN1-204ENST00000541029 WASHC2AQ641Q2 1341 aa27.58■■■□□ 2.01
ATN1-204ENST00000541029 ITGB4P16144 1822 aa27.57■■■□□ 2
ATN1-204ENST00000541029 TUBGCP6Q96RT7 1819 aa27.57■■■□□ 2
ATN1-204ENST00000541029 SYTL4Q96C24 671 aaPredicted RBP27.56■■■□□ 2
ATN1-204ENST00000541029 KIF7Q2M1P5 1343 aa27.56■■■□□ 2
ATN1-204ENST00000541029 STK32BQ9NY57 414 aa27.55■■■□□ 2
ATN1-204ENST00000541029 PRIM1P49642 420 aaKnown RBP27.54■■■□□ 2
ATN1-204ENST00000541029 QSER1Q2KHR3 1735 aa27.54■■■□□ 2
ATN1-204ENST00000541029 PCDH11XQ9BZA7 1347 aa27.54■■■□□ 2
ATN1-204ENST00000541029 PCDH11YQ9BZA8 1340 aa27.54■■■□□ 2
ATN1-204ENST00000541029 PDGFDQ9GZP0 370 aaPredicted RBP27.54■■■□□ 2
ATN1-204ENST00000541029 SLC15A2Q16348 729 aa27.52■■■□□ 2
ATN1-204ENST00000541029 SPON1Q9HCB6 807 aa27.51■■□□□ 1.99
ATN1-204ENST00000541029 EYA1Q99502 592 aa27.5■■□□□ 1.99
ATN1-204ENST00000541029 LRRC4BQ9NT99 713 aa27.5■■□□□ 1.99
ATN1-204ENST00000541029 EIF4A2Q14240 407 aaKnown RBP27.48■■□□□ 1.99
ATN1-204ENST00000541029 CYP27B1O15528 508 aa27.47■■□□□ 1.99
ATN1-204ENST00000541029 ZNF827Q17R98 1081 aa27.47■■□□□ 1.99
ATN1-204ENST00000541029 KNSTRNQ9Y448 316 aa27.47■■□□□ 1.99
ATN1-204ENST00000541029 C5P01031 1676 aa27.46■■□□□ 1.99
ATN1-204ENST00000541029 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
ATN1-204ENST00000541029 ZBTB7AO95365 584 aa27.45■■□□□ 1.98
ATN1-204ENST00000541029 MORC1Q86VD1 984 aa27.45■■□□□ 1.98
ATN1-204ENST00000541029 SLC27A3Q5K4L6 730 aa27.44■■□□□ 1.98
ATN1-204ENST00000541029 KCNQ4P56696 695 aa27.43■■□□□ 1.98
ATN1-204ENST00000541029 PPP1R1BQ9UD71 204 aaPredicted RBP27.43■■□□□ 1.98
ATN1-204ENST00000541029 IGSF1Q8N6C5 1336 aa27.41■■□□□ 1.98
ATN1-204ENST00000541029 AMER1Q5JTC6 1135 aaPredicted RBP27.41■■□□□ 1.98
ATN1-204ENST00000541029 SPG7Q9UQ90 795 aa27.4■■□□□ 1.98
ATN1-204ENST00000541029 AKT1S1Q96B36 256 aa27.39■■□□□ 1.98
ATN1-204ENST00000541029 CCNL1Q9UK58 526 aaPredicted RBP27.38■■□□□ 1.97
ATN1-204ENST00000541029 ATF5Q9Y2D1 282 aaPredicted RBP27.38■■□□□ 1.97
ATN1-204ENST00000541029 COL24A1Q17RW2 1714 aa27.37■■□□□ 1.97
ATN1-204ENST00000541029 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
ATN1-204ENST00000541029 PTGER2P43116 358 aa27.36■■□□□ 1.97
ATN1-204ENST00000541029 MPRIPQ6WCQ1 1025 aa27.36■■□□□ 1.97
ATN1-204ENST00000541029 MTFR1LQ9H019 292 aa27.36■■□□□ 1.97
ATN1-204ENST00000541029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.36■■□□□ 1.97
ATN1-204ENST00000541029 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
ATN1-204ENST00000541029 NKX1-1Q15270 411 aaPredicted RBP27.34■■□□□ 1.97
ATN1-204ENST00000541029 PHKG2P15735 406 aa27.33■■□□□ 1.97
ATN1-204ENST00000541029 PNPLA7Q6ZV29 1317 aa27.33■■□□□ 1.97
ATN1-204ENST00000541029 C4BP0C0L5 1744 aa27.33■■□□□ 1.96
ATN1-204ENST00000541029 PER1O15534 1290 aaPredicted RBP27.31■■□□□ 1.96
ATN1-204ENST00000541029 AEBP1Q8IUX7 1158 aa27.31■■□□□ 1.96
ATN1-204ENST00000541029 IFNL2Q8IZJ0 200 aa27.31■■□□□ 1.96
ATN1-204ENST00000541029 VIRMAQ69YN4 1812 aaKnown RBP27.3■■□□□ 1.96
ATN1-204ENST00000541029 SGIP1Q9BQI5 828 aa27.3■■□□□ 1.96
ATN1-204ENST00000541029 TFCP2L1Q9NZI6 479 aa27.3■■□□□ 1.96
ATN1-204ENST00000541029 CC2D1BQ5T0F9 858 aaKnown RBP27.29■■□□□ 1.96
ATN1-204ENST00000541029 PIGBQ92521 554 aa27.29■■□□□ 1.96
ATN1-204ENST00000541029 UBR3Q6ZT12 1888 aa27.29■■□□□ 1.96
ATN1-204ENST00000541029 KDRP35968 1356 aa27.26■■□□□ 1.95
ATN1-204ENST00000541029 IL13P35225 146 aa27.26■■□□□ 1.95
ATN1-204ENST00000541029 TMOD3Q9NYL9 352 aa27.26■■□□□ 1.95
ATN1-204ENST00000541029 SCN11AQ9UI33 1791 aa27.25■■□□□ 1.95
ATN1-204ENST00000541029 SMARCC1Q92922 1105 aaPredicted RBP27.25■■□□□ 1.95
ATN1-204ENST00000541029 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
ATN1-204ENST00000541029 MTHFSP49914 203 aa27.24■■□□□ 1.95
ATN1-204ENST00000541029 SULT6B1Q6IMI4 303 aa27.24■■□□□ 1.95
ATN1-204ENST00000541029 NPC1L1Q9UHC9 1359 aa27.23■■□□□ 1.95
ATN1-204ENST00000541029 PLEKHO1Q53GL0 409 aaPredicted RBP27.23■■□□□ 1.95
ATN1-204ENST00000541029 ZNF530Q6P9A1 599 aaPredicted RBP27.23■■□□□ 1.95
ATN1-204ENST00000541029 CNGB1Q14028 1251 aaPredicted RBP27.22■■□□□ 1.95
ATN1-204ENST00000541029 SLC16A10Q8TF71 515 aa27.22■■□□□ 1.95
ATN1-204ENST00000541029 FHDC1Q9C0D6 1143 aaPredicted RBP27.22■■□□□ 1.95
ATN1-204ENST00000541029 COL3A1P02461 1466 aaPredicted RBP27.21■■□□□ 1.95
ATN1-204ENST00000541029 COL5A3P25940 1745 aaPredicted RBP27.2■■□□□ 1.94
ATN1-204ENST00000541029 ARXQ96QS3 562 aa27.2■■□□□ 1.94
ATN1-204ENST00000541029 ZNF831Q5JPB2 1677 aa27.2■■□□□ 1.94
ATN1-204ENST00000541029 AMOTQ4VCS5 1084 aa27.19■■□□□ 1.94
ATN1-204ENST00000541029 ASAP1Q9ULH1 1129 aa27.19■■□□□ 1.94
ATN1-204ENST00000541029 COL23A1Q86Y22 540 aaPredicted RBP27.18■■□□□ 1.94
ATN1-204ENST00000541029 LOC102724428A0A0B4J2F2 783 aa27.17■■□□□ 1.94
ATN1-204ENST00000541029 MSH5O43196 834 aa27.17■■□□□ 1.94
ATN1-204ENST00000541029 HSP90AB1P08238 724 aaKnown RBP27.17■■□□□ 1.94
ATN1-204ENST00000541029 SIK1P57059 783 aa27.17■■□□□ 1.94
ATN1-204ENST00000541029 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
ATN1-204ENST00000541029 SYT17Q9BSW7 474 aa27.16■■□□□ 1.94
ATN1-204ENST00000541029 ATG3Q9NT62 314 aa27.16■■□□□ 1.94
ATN1-204ENST00000541029 MAP3K5Q99683 1374 aa27.15■■□□□ 1.94
ATN1-204ENST00000541029 ERVV-2B6SEH9 535 aa27.15■■□□□ 1.94
ATN1-204ENST00000541029 C1orf141Q5JVX7 400 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms