RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-206ENST00000540771 TNS2Q63HR2 1409 aa29.94■■■□□ 2.38
RAB6A-206ENST00000540771 PLEKHG2Q9H7P9 1386 aa29.93■■■□□ 2.38
RAB6A-206ENST00000540771 HMOX1P09601 288 aa29.92■■■□□ 2.38
RAB6A-206ENST00000540771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.91■■■□□ 2.385e-7■□□□□ 10.6
RAB6A-206ENST00000540771 MARCH10Q8NA82 808 aaPredicted RBP29.9■■■□□ 2.38
RAB6A-206ENST00000540771 U2AF1L5P0DN76 240 aaPredicted RBP29.89■■■□□ 2.38
RAB6A-206ENST00000540771 U2AF1Q01081 240 aaKnown RBP eCLIP29.89■■■□□ 2.384e-9■■□□□ 12.7
RAB6A-206ENST00000540771 FAM182BQ5T319 152 aa29.88■■■□□ 2.37
RAB6A-206ENST00000540771 SPG7Q9UQ90 795 aa29.87■■■□□ 2.37
RAB6A-206ENST00000540771 DIEXFQ68CQ4 756 aaKnown RBP29.86■■■□□ 2.37
RAB6A-206ENST00000540771 DDX54Q8TDD1 881 aaKnown RBP29.86■■■□□ 2.37
RAB6A-206ENST00000540771 FCHSD2O94868 740 aa29.85■■■□□ 2.37
RAB6A-206ENST00000540771 PLEKHO1Q53GL0 409 aaPredicted RBP29.85■■■□□ 2.37
RAB6A-206ENST00000540771 FAM196AQ6ZSG2 479 aa29.85■■■□□ 2.37
RAB6A-206ENST00000540771 AMOTQ4VCS5 1084 aa29.84■■■□□ 2.37
RAB6A-206ENST00000540771 RSPH6AQ9H0K4 717 aa29.84■■■□□ 2.37
RAB6A-206ENST00000540771 PCDH11XQ9BZA7 1347 aa29.83■■■□□ 2.37
RAB6A-206ENST00000540771 PCDH11YQ9BZA8 1340 aa29.83■■■□□ 2.37
RAB6A-206ENST00000540771 BCL9O00512 1426 aa29.82■■■□□ 2.36
RAB6A-206ENST00000540771 CCDC184Q52MB2 194 aa29.82■■■□□ 2.36
RAB6A-206ENST00000540771 CYP27B1O15528 508 aa29.81■■■□□ 2.36
RAB6A-206ENST00000540771 PKD1L3Q7Z443 1732 aa29.81■■■□□ 2.36
RAB6A-206ENST00000540771 SOCS7O14512 581 aa29.79■■■□□ 2.36
RAB6A-206ENST00000540771 PRKAR2BP31323 418 aa29.79■■■□□ 2.36
RAB6A-206ENST00000540771 SHANK3Q9BYB0 1731 aa29.78■■■□□ 2.36
RAB6A-206ENST00000540771 IFNL2Q8IZJ0 200 aa29.77■■■□□ 2.36
RAB6A-206ENST00000540771 PHKG2P15735 406 aa29.76■■■□□ 2.35
RAB6A-206ENST00000540771 WDR43Q15061 677 aaKnown RBP eCLIP29.76■■■□□ 2.35
RAB6A-206ENST00000540771 NKX1-1Q15270 411 aaPredicted RBP29.75■■■□□ 2.35
RAB6A-206ENST00000540771 ZNF530Q6P9A1 599 aaPredicted RBP29.75■■■□□ 2.35
RAB6A-206ENST00000540771 PNNQ9H307 717 aaKnown RBP29.75■■■□□ 2.35
RAB6A-206ENST00000540771 MRS2Q9HD23 443 aa29.75■■■□□ 2.35
RAB6A-206ENST00000540771 MTHFSDQ2M296 383 aaKnown RBP29.74■■■□□ 2.35
RAB6A-206ENST00000540771 UPF1Q92900 1129 aaKnown RBP eCLIP29.74■■■□□ 2.35
RAB6A-206ENST00000540771 PHACTR3Q96KR7 559 aa29.74■■■□□ 2.35
RAB6A-206ENST00000540771 CCDC125Q86Z20 511 aa29.72■■■□□ 2.35
RAB6A-206ENST00000540771 PLEKHF1Q96S99 279 aa29.72■■■□□ 2.35
RAB6A-206ENST00000540771 ADAMTS8Q9UP79 889 aa29.72■■■□□ 2.35
RAB6A-206ENST00000540771 PNISRQ8TF01 805 aaKnown RBP29.71■■■□□ 2.35
RAB6A-206ENST00000540771 EP400Q96L91 3159 aa29.7■■■□□ 2.35
RAB6A-206ENST00000540771 TRIM37O94972 964 aa29.7■■■□□ 2.35
RAB6A-206ENST00000540771 C1orf141Q5JVX7 400 aa29.7■■■□□ 2.35
RAB6A-206ENST00000540771 GAS2L2Q8NHY3 880 aa29.7■■■□□ 2.35
RAB6A-206ENST00000540771 HSP90AB1P08238 724 aaKnown RBP29.69■■■□□ 2.34
RAB6A-206ENST00000540771 AKAP4Q5JQC9 854 aa29.69■■■□□ 2.34
RAB6A-206ENST00000540771 NEFMP07197 916 aa29.68■■■□□ 2.34
RAB6A-206ENST00000540771 ACSBG1Q96GR2 724 aa29.67■■■□□ 2.34
RAB6A-206ENST00000540771 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
RAB6A-206ENST00000540771 DCAF5Q96JK2 942 aa29.66■■■□□ 2.34
RAB6A-206ENST00000540771 CCER2I3L3R5 266 aa29.65■■■□□ 2.34
RAB6A-206ENST00000540771 KCNQ2O43526 872 aa29.65■■■□□ 2.34
RAB6A-206ENST00000540771 PRIM1P49642 420 aaKnown RBP29.64■■■□□ 2.34
RAB6A-206ENST00000540771 PTF1AQ7RTS3 328 aa29.63■■■□□ 2.33
RAB6A-206ENST00000540771 MAPK8IP3Q9UPT6 1336 aa29.63■■■□□ 2.33
RAB6A-206ENST00000540771 SBF2Q86WG5 1849 aa29.62■■■□□ 2.33
RAB6A-206ENST00000540771 SF3B2Q13435 895 aaKnown RBP29.62■■■□□ 2.33
RAB6A-206ENST00000540771 MPRIPQ6WCQ1 1025 aa29.62■■■□□ 2.33
RAB6A-206ENST00000540771 MIER1Q8N108 512 aa29.62■■■□□ 2.33
RAB6A-206ENST00000540771 RUNDC1Q96C34 613 aa29.61■■■□□ 2.33
RAB6A-206ENST00000540771 GNAT3A8MTJ3 354 aa29.6■■■□□ 2.33
RAB6A-206ENST00000540771 ERVV-2B6SEH9 535 aa29.6■■■□□ 2.33
RAB6A-206ENST00000540771 KDM6AO15550 1401 aaPredicted RBP29.6■■■□□ 2.33
RAB6A-206ENST00000540771 CCDC146Q8IYE0 955 aa29.59■■■□□ 2.33
RAB6A-206ENST00000540771 SYTL4Q96C24 671 aaPredicted RBP29.59■■■□□ 2.33
RAB6A-206ENST00000540771 MAP3K5Q99683 1374 aa29.59■■■□□ 2.33
RAB6A-206ENST00000540771 NHSQ6T4R5 1651 aa29.59■■■□□ 2.33
RAB6A-206ENST00000540771 APBA3O96018 575 aa29.58■■■□□ 2.33
RAB6A-206ENST00000540771 NFE2L2Q16236 605 aa29.58■■■□□ 2.33
RAB6A-206ENST00000540771 RNMTO43148 476 aaKnown RBP29.57■■■□□ 2.32
RAB6A-206ENST00000540771 LGR6Q9HBX8 967 aa29.57■■■□□ 2.32
RAB6A-206ENST00000540771 DOT1LQ8TEK3 1739 aa29.57■■■□□ 2.32
RAB6A-206ENST00000540771 HTATSF1O43719 755 aaKnown RBP29.55■■■□□ 2.32
RAB6A-206ENST00000540771 BAG6P46379 1132 aa29.55■■■□□ 2.32
RAB6A-206ENST00000540771 TNS1Q9HBL0 1735 aaKnown RBP29.54■■■□□ 2.32
RAB6A-206ENST00000540771 TOGARAM1Q9Y4F4 1720 aa29.54■■■□□ 2.32
RAB6A-206ENST00000540771 IL17REQ8NFR9 667 aa29.54■■■□□ 2.32
RAB6A-206ENST00000540771 PLSCR1O15162 318 aa29.53■■■□□ 2.32
RAB6A-206ENST00000540771 TMPOP42166 694 aaKnown RBP29.53■■■□□ 2.32
RAB6A-206ENST00000540771 PIGBQ92521 554 aa29.53■■■□□ 2.32
RAB6A-206ENST00000540771 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
RAB6A-206ENST00000540771 CABP4P57796 275 aa29.52■■■□□ 2.32
RAB6A-206ENST00000540771 DEFB132Q7Z7B7 95 aa29.52■■■□□ 2.32
RAB6A-206ENST00000540771 FAM9BQ8IZU0 186 aa29.51■■■□□ 2.31
RAB6A-206ENST00000540771 RTF1Q92541 710 aaKnown RBP29.51■■■□□ 2.31
RAB6A-206ENST00000540771 KAT6BQ8WYB5 2073 aa29.51■■■□□ 2.31
RAB6A-206ENST00000540771 ADAMTS7Q9UKP4 1686 aa29.5■■■□□ 2.31
RAB6A-206ENST00000540771 RIPK4P57078 832 aa29.49■■■□□ 2.31
RAB6A-206ENST00000540771 EN1Q05925 392 aaPredicted RBP29.49■■■□□ 2.31
RAB6A-206ENST00000540771 NFATC2IPQ8NCF5 419 aa29.49■■■□□ 2.31
RAB6A-206ENST00000540771 SLC52A2Q9HAB3 445 aa29.49■■■□□ 2.31
RAB6A-206ENST00000540771 CEMIPQ8WUJ3 1361 aa29.49■■■□□ 2.31
RAB6A-206ENST00000540771 CAMKK2Q96RR4 588 aa29.48■■■□□ 2.31
RAB6A-206ENST00000540771 SCN11AQ9UI33 1791 aa29.48■■■□□ 2.31
RAB6A-206ENST00000540771 APAF1O14727 1248 aa29.47■■■□□ 2.31
RAB6A-206ENST00000540771 ITGB4P16144 1822 aa29.47■■■□□ 2.31
RAB6A-206ENST00000540771 BTAF1O14981 1849 aa29.46■■■□□ 2.31
RAB6A-206ENST00000540771 MCM10Q7L590 875 aa29.46■■■□□ 2.31
RAB6A-206ENST00000540771 RRP7AQ9Y3A4 280 aaKnown RBP29.46■■■□□ 2.31
RAB6A-206ENST00000540771 MRC1P22897 1456 aa29.45■■■□□ 2.31
RAB6A-206ENST00000540771 DCTN1Q14203 1278 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms