RNA–Protein interactions for RNA: ENST00000539587.5

LRTOMT-217, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-217ENST00000539587 CD2APQ9Y5K6 639 aa10.42□□□□□ -0.74
LRTOMT-217ENST00000539587 DOT1LQ8TEK3 1739 aa10.41□□□□□ -0.74
LRTOMT-217ENST00000539587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.74
LRTOMT-217ENST00000539587 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
LRTOMT-217ENST00000539587 DDX54Q8TDD1 881 aaKnown RBP10.41□□□□□ -0.74
LRTOMT-217ENST00000539587 KLHL34Q8N239 644 aa10.4□□□□□ -0.74
LRTOMT-217ENST00000539587 DNAJC5GQ8N7S2 189 aa10.4□□□□□ -0.74
LRTOMT-217ENST00000539587 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
LRTOMT-217ENST00000539587 KIF3CO14782 793 aa10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 ZCRB1Q8TBF4 217 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 GPBP1L1Q9HC44 474 aaPredicted RBP10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 EDC4Q6P2E9 1401 aaKnown RBP10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 C5P01031 1676 aa10.38□□□□□ -0.75
LRTOMT-217ENST00000539587 UBR3Q6ZT12 1888 aa10.37□□□□□ -0.75
LRTOMT-217ENST00000539587 AMIGO3Q86WK7 504 aa10.37□□□□□ -0.75
LRTOMT-217ENST00000539587 PUS7Q96PZ0 661 aaKnown RBP10.37□□□□□ -0.75
LRTOMT-217ENST00000539587 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
LRTOMT-217ENST00000539587 MEGF6O75095 1541 aa10.37□□□□□ -0.75
LRTOMT-217ENST00000539587 MAP2P11137 1827 aaKnown RBP10.36□□□□□ -0.75
LRTOMT-217ENST00000539587 FBLN1P23142 703 aa10.36□□□□□ -0.75
LRTOMT-217ENST00000539587 HOXC9P31274 260 aa10.36□□□□□ -0.75
LRTOMT-217ENST00000539587 MSL1Q68DK7 614 aa10.36□□□□□ -0.75
LRTOMT-217ENST00000539587 MAP3K19Q56UN5 1328 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 ITGB4P16144 1822 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 NBPF6Q5VWK0 638 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 NBPF4Q96M43 638 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 SIN3AQ96ST3 1273 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 A0A1W2PP64 1363 aa10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
LRTOMT-217ENST00000539587 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
LRTOMT-217ENST00000539587 KIAA1551Q9HCM1 1747 aa10.34□□□□□ -0.75
LRTOMT-217ENST00000539587 LTV1Q96GA3 475 aaPredicted RBP10.34□□□□□ -0.75
LRTOMT-217ENST00000539587 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
LRTOMT-217ENST00000539587 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
LRTOMT-217ENST00000539587 C4BP0C0L5 1744 aa10.33□□□□□ -0.76
LRTOMT-217ENST00000539587 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
LRTOMT-217ENST00000539587 USP47Q96K76 1375 aa10.33□□□□□ -0.76
LRTOMT-217ENST00000539587 MSH5O43196 834 aa10.32□□□□□ -0.76
LRTOMT-217ENST00000539587 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
LRTOMT-217ENST00000539587 TERF2IPQ9NYB0 399 aa10.32□□□□□ -0.76
LRTOMT-217ENST00000539587 IGSF1Q8N6C5 1336 aa10.32□□□□□ -0.76
LRTOMT-217ENST00000539587 CYP27B1O15528 508 aa10.31□□□□□ -0.76
LRTOMT-217ENST00000539587 SMIM5Q71RC9 77 aa10.31□□□□□ -0.76
LRTOMT-217ENST00000539587 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
LRTOMT-217ENST00000539587 HMGB2P26583 209 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-217ENST00000539587 APLP1P51693 650 aa10.3□□□□□ -0.76
LRTOMT-217ENST00000539587 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
LRTOMT-217ENST00000539587 TESK2Q96S53 571 aa10.3□□□□□ -0.76
LRTOMT-217ENST00000539587 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
LRTOMT-217ENST00000539587 RTL1A6NKG5 1358 aa10.29□□□□□ -0.76
LRTOMT-217ENST00000539587 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
LRTOMT-217ENST00000539587 TOMM70O94826 608 aa10.29□□□□□ -0.76
LRTOMT-217ENST00000539587 PIGBQ92521 554 aa10.29□□□□□ -0.76
LRTOMT-217ENST00000539587 COG3Q96JB2 828 aa10.29□□□□□ -0.76
LRTOMT-217ENST00000539587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 FYB1O15117 783 aa10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 AMPHP49418 695 aa10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 USHBP1Q8N6Y0 703 aa10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 N4BP2Q86UW6 1770 aaPredicted RBP10.28□□□□□ -0.76
LRTOMT-217ENST00000539587 PKD1L3Q7Z443 1732 aa10.27□□□□□ -0.76
LRTOMT-217ENST00000539587 NCAPD2Q15021 1401 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 NSD3Q9BZ95 1437 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 SSFA2P28290 1259 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 SMARCC1Q92922 1105 aaPredicted RBP10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 WDR90Q96KV7 1748 aa10.27□□□□□ -0.77
LRTOMT-217ENST00000539587 INSRP06213 1382 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 PXDNLA1KZ92 1463 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 TATP17735 454 aaPredicted RBP10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 RRS1Q15050 365 aaKnown RBP10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 WWC3Q9ULE0 1092 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 PCDH11XQ9BZA7 1347 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 PCDH11YQ9BZA8 1340 aa10.26□□□□□ -0.77
LRTOMT-217ENST00000539587 SBF1O95248 1867 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 KCNA3P22001 575 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 TGFB2P61812 414 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 ITPK1Q13572 414 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 COL13A1Q5TAT6 717 aaPredicted RBP10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 AK7Q96M32 723 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 ARFGEF1Q9Y6D6 1849 aa10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 MYH14Q7Z406 1995 aaKnown RBP10.25□□□□□ -0.77
LRTOMT-217ENST00000539587 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 SIK1P57059 783 aa10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 NMRK2Q9NPI5 230 aa10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 ZNF831Q5JPB2 1677 aa10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 KIF24Q5T7B8 1368 aa10.24□□□□□ -0.77
LRTOMT-217ENST00000539587 A0A0G2JLW4 131 aa10.23□□□□□ -0.77
LRTOMT-217ENST00000539587 PHF14O94880 888 aa10.23□□□□□ -0.77
LRTOMT-217ENST00000539587 KLRG1Q96E93 195 aa10.23□□□□□ -0.77
LRTOMT-217ENST00000539587 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms