RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ERBB3P21860 1342 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 HOXD8P13378 290 aaPredicted RBP1.84□□□□□ -2.11
HIF1A-204ENST00000539097 MFAP1P55081 439 aaKnown RBP1.84□□□□□ -2.11
HIF1A-204ENST00000539097 NCOA4Q13772 614 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 TAS1R3Q7RTX0 852 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 SLC43A3Q8NBI5 491 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 SLC4A9Q96Q91 983 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 IL21Q9HBE4 155 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 IVNS1ABPQ9Y6Y0 642 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 ZBBXA8MT70 800 aa1.84□□□□□ -2.12
HIF1A-204ENST00000539097 PPEF1O14829 653 aaPredicted RBP1.84□□□□□ -2.12
HIF1A-204ENST00000539097 ARID4AP29374 1257 aaPredicted RBP1.84□□□□□ -2.12
HIF1A-204ENST00000539097 SF3B2Q13435 895 aaKnown RBP1.84□□□□□ -2.12
HIF1A-204ENST00000539097 FAM13BQ9NYF5 915 aa1.84□□□□□ -2.12
HIF1A-204ENST00000539097 ADH1BP00325 375 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 SH3BP5LQ7L8J4 393 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 ANKK1Q8NFD2 765 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF594Q96JF6 807 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 CCDC85AQ96PX6 553 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 KIAA1522Q9P206 1035 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L3A6NCW0 530 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L4A6NCW7 530 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 VARSP26640 1264 aaKnown RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 TRAF7Q6Q0C0 670 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L2Q6R6M4 530 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 XKR5Q6UX68 686 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L1Q7RTZ2 530 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 V9GY48 417 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 CSB-PGBD3P0DP91 1061 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 IGFBP4P22692 258 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 GGCXP38435 758 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 PTK7Q13308 1070 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 OCLNQ16625 522 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 SOGA3Q5TF21 947 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 DNAJC14Q6Y2X3 702 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USB1Q9BQ65 265 aaKnown RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 FKBPLQ9UIM3 349 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 ALKBH2Q6NS38 261 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 SH3RF1Q7Z6J0 888 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 NBPF15Q8N660 670 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 CCER1Q8TC90 406 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-204ENST00000539097 FOXJ1Q92949 421 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 MYO19Q96H55 970 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP3Q9Y6I4 520 aa1.83□□□□□ -2.12
HIF1A-204ENST00000539097 USP17L5A8MUK1 530 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 LAMC2Q13753 1193 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ANKRD13DQ6ZTN6 518 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 VRTNQ9H8Y1 702 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ANO2Q9NQ90 1003 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 DGAT1O75907 488 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 CARD14Q9BXL6 1004 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 METTL5Q9NRN9 209 aaKnown RBP1.82□□□□□ -2.12
HIF1A-204ENST00000539097 SEPT3Q9UH03 358 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 HPS5Q9UPZ3 1129 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 BACH1O14867 736 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ZBTB7BO15156 539 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-204ENST00000539097 SMCPP49901 116 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-204ENST00000539097 SKOR1P84550 965 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 LINC01559Q495D7 138 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ESCO1Q5FWF5 840 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ANKLE1Q8NAG6 615 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 ADAM32Q8TC27 787 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 XAGE2Q96GT9 111 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 BRINP2Q9C0B6 783 aa1.82□□□□□ -2.12
HIF1A-204ENST00000539097 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-204ENST00000539097 RBM25P49756 843 aaKnown RBP1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SEMA3FQ13275 785 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 TJAP1Q5JTD0 557 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SH3PXD2AQ5TCZ1 1133 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 NPAS3Q8IXF0 933 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 DCAF11Q8TEB1 546 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SETDB2Q96T68 719 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 CEP126Q9P2H0 1117 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 TACC3Q9Y6A5 838 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 S1PR4O95977 384 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF211Q13398 564 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-204ENST00000539097 MTFR1Q15390 333 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 LDLRAD1Q5T700 205 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 CC2D2BQ6DHV5 1058 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SND1Q7KZF4 910 aaKnown RBP eCLIP1.81□□□□□ -2.12
HIF1A-204ENST00000539097 KDF1Q8NAX2 398 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-204ENST00000539097 FBF1Q8TES7 1133 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PMEPA1Q969W9 287 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SPATA32Q96LK8 384 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 DNAJC25Q9H1X3 360 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 NLRP2Q9NX02 1062 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 BTBD11A6QL63 1104 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 CDK2AP1O14519 115 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 GIGYF1O75420 1035 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-204ENST00000539097 CCNYL3P0C7X3 344 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 SSFA2P28290 1259 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PRR20EP86478 221 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PRR20CP86479 221 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PRR20DP86480 221 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PRR20BP86481 221 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 PRR20AP86496 221 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 NR5A1Q13285 461 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 IER5Q5VY09 327 aa1.81□□□□□ -2.12
HIF1A-204ENST00000539097 TSEN2Q8NCE0 465 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms