RNA–Protein interactions for RNA: ENST00000538903.1

RAB35-203, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-203ENST00000538903 USP47Q96K76 1375 aa20.19■□□□□ 0.82
RAB35-203ENST00000538903 KIF20BQ96Q89 1820 aa20.18■□□□□ 0.82
RAB35-203ENST00000538903 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
RAB35-203ENST00000538903 FYB1O15117 783 aa20.18■□□□□ 0.82
RAB35-203ENST00000538903 ZCRB1Q8TBF4 217 aaKnown RBP20.18■□□□□ 0.82
RAB35-203ENST00000538903 GGNBP2Q9H3C7 697 aa20.18■□□□□ 0.82
RAB35-203ENST00000538903 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
RAB35-203ENST00000538903 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
RAB35-203ENST00000538903 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
RAB35-203ENST00000538903 SLC24A1O60721 1099 aa20.16■□□□□ 0.82
RAB35-203ENST00000538903 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
RAB35-203ENST00000538903 PNPLA7Q6ZV29 1317 aa20.16■□□□□ 0.82
RAB35-203ENST00000538903 LY75O60449 1722 aa20.16■□□□□ 0.82
RAB35-203ENST00000538903 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
RAB35-203ENST00000538903 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
RAB35-203ENST00000538903 CHD4Q14839 1912 aa20.14■□□□□ 0.81
RAB35-203ENST00000538903 TMF1P82094 1093 aa20.14■□□□□ 0.81
RAB35-203ENST00000538903 ZNF784Q8NCA9 323 aaPredicted RBP20.14■□□□□ 0.81
RAB35-203ENST00000538903 SLC16A10Q8TF71 515 aa20.13■□□□□ 0.81
RAB35-203ENST00000538903 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
RAB35-203ENST00000538903 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
RAB35-203ENST00000538903 HSP90AB2PQ58FF8 381 aa20.11■□□□□ 0.81
RAB35-203ENST00000538903 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
RAB35-203ENST00000538903 CCNL1Q9UK58 526 aaPredicted RBP20.1■□□□□ 0.81
RAB35-203ENST00000538903 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
RAB35-203ENST00000538903 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
RAB35-203ENST00000538903 CGNL1Q0VF96 1302 aa20.08■□□□□ 0.81
RAB35-203ENST00000538903 ANKRD26Q9UPS8 1709 aa20.08■□□□□ 0.81
RAB35-203ENST00000538903 POLD1P28340 1107 aa20.08■□□□□ 0.81
RAB35-203ENST00000538903 CARD14Q9BXL6 1004 aa20.08■□□□□ 0.81
RAB35-203ENST00000538903 SMG6Q86US8 1419 aaKnown RBP20.08■□□□□ 0.8
RAB35-203ENST00000538903 INSRP06213 1382 aa20.08■□□□□ 0.8
RAB35-203ENST00000538903 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
RAB35-203ENST00000538903 GPR162Q16538 588 aa20.07■□□□□ 0.8
RAB35-203ENST00000538903 FLT4P35916 1363 aa20.06■□□□□ 0.8
RAB35-203ENST00000538903 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
RAB35-203ENST00000538903 NLGN2Q8NFZ4 835 aa20.05■□□□□ 0.8
RAB35-203ENST00000538903 PCGF6Q9BYE7 350 aa20.05■□□□□ 0.8
RAB35-203ENST00000538903 GOLGB1Q14789 3259 aaKnown RBP20.04■□□□□ 0.8
RAB35-203ENST00000538903 MSH5O43196 834 aa20.04■□□□□ 0.8
RAB35-203ENST00000538903 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
RAB35-203ENST00000538903 EMILIN1Q9Y6C2 1016 aa20.04■□□□□ 0.8
RAB35-203ENST00000538903 CYP27B1O15528 508 aa20.03■□□□□ 0.8
RAB35-203ENST00000538903 CDCA8Q53HL2 280 aa20.03■□□□□ 0.8
RAB35-203ENST00000538903 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 NSD3Q9BZ95 1437 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
RAB35-203ENST00000538903 KIF24Q5T7B8 1368 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 C5P01031 1676 aa20.02■□□□□ 0.8
RAB35-203ENST00000538903 MPRIPQ6WCQ1 1025 aa20.01■□□□□ 0.79
RAB35-203ENST00000538903 ITGB4P16144 1822 aa20.01■□□□□ 0.79
RAB35-203ENST00000538903 TAF1LQ8IZX4 1826 aa20.01■□□□□ 0.79
RAB35-203ENST00000538903 PALLDQ8WX93 1383 aa20■□□□□ 0.79
RAB35-203ENST00000538903 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
RAB35-203ENST00000538903 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
RAB35-203ENST00000538903 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
RAB35-203ENST00000538903 NCAPD2Q15021 1401 aa19.97■□□□□ 0.79
RAB35-203ENST00000538903 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.797e-12■■■■■ 36.7
RAB35-203ENST00000538903 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
RAB35-203ENST00000538903 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
RAB35-203ENST00000538903 PIGBQ92521 554 aa19.95■□□□□ 0.78
RAB35-203ENST00000538903 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
RAB35-203ENST00000538903 C1QTNF8P60827 252 aa19.94■□□□□ 0.78
RAB35-203ENST00000538903 EYA1Q99502 592 aa19.94■□□□□ 0.78
RAB35-203ENST00000538903 NKX1-1Q15270 411 aaPredicted RBP19.93■□□□□ 0.78
RAB35-203ENST00000538903 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
RAB35-203ENST00000538903 SMARCC1Q92922 1105 aaPredicted RBP19.92■□□□□ 0.78
RAB35-203ENST00000538903 UBR3Q6ZT12 1888 aa19.92■□□□□ 0.78
RAB35-203ENST00000538903 FLAD1Q8NFF5 587 aa19.91■□□□□ 0.78
RAB35-203ENST00000538903 POLKQ9UBT6 870 aa19.91■□□□□ 0.78
RAB35-203ENST00000538903 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
RAB35-203ENST00000538903 AK7Q96M32 723 aa19.9■□□□□ 0.78
RAB35-203ENST00000538903 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
RAB35-203ENST00000538903 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
RAB35-203ENST00000538903 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
RAB35-203ENST00000538903 PHF14O94880 888 aa19.89■□□□□ 0.77
RAB35-203ENST00000538903 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
RAB35-203ENST00000538903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.88■□□□□ 0.77
RAB35-203ENST00000538903 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
RAB35-203ENST00000538903 TNNT2P45379 298 aaPredicted RBP19.88■□□□□ 0.77
RAB35-203ENST00000538903 SIK1P57059 783 aa19.88■□□□□ 0.77
RAB35-203ENST00000538903 LINC00116Q8NCU8 138 aa19.88■□□□□ 0.77
RAB35-203ENST00000538903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
RAB35-203ENST00000538903 ASAP1Q9ULH1 1129 aa19.88■□□□□ 0.77
RAB35-203ENST00000538903 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
RAB35-203ENST00000538903 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
RAB35-203ENST00000538903 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
RAB35-203ENST00000538903 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
RAB35-203ENST00000538903 PHKG2P15735 406 aa19.86■□□□□ 0.77
RAB35-203ENST00000538903 ITPK1Q13572 414 aa19.86■□□□□ 0.77
RAB35-203ENST00000538903 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
RAB35-203ENST00000538903 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
RAB35-203ENST00000538903 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
RAB35-203ENST00000538903 ATG3Q9NT62 314 aa19.84■□□□□ 0.77
RAB35-203ENST00000538903 SSFA2P28290 1259 aa19.83■□□□□ 0.77
RAB35-203ENST00000538903 WWC3Q9ULE0 1092 aa19.83■□□□□ 0.77
RAB35-203ENST00000538903 GNPATO15228 680 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms